RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 DDNO94850 711 aaPredicted RBP4.92□□□□□ -1.62
LRRK2-204ENST00000430804 CTSHP09668 335 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 GRK4P32298 578 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 AVPR1AP37288 418 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 THPOP40225 353 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 SYKP43405 635 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 HNRNPH2P55795 449 aaKnown RBP4.92□□□□□ -1.62
LRRK2-204ENST00000430804 RAB44Q7Z6P3 723 aaPredicted RBP4.92□□□□□ -1.62
LRRK2-204ENST00000430804 B3GALNT2Q8NCR0 500 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 XPO6Q96QU8 1125 aaKnown RBP4.92□□□□□ -1.62
LRRK2-204ENST00000430804 SYT17Q9BSW7 474 aa4.92□□□□□ -1.62
LRRK2-204ENST00000430804 MAGED2Q9UNF1 606 aaPredicted RBP4.92□□□□□ -1.62
LRRK2-204ENST00000430804 FRMPD2Q68DX3 1309 aaPredicted RBP4.92□□□□□ -1.62
LRRK2-204ENST00000430804 TTLL13PA6NNM8 815 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 SETSIPP0DME0 302 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 EIF2AK2P19525 551 aaKnown RBP4.91□□□□□ -1.62
LRRK2-204ENST00000430804 MCAMP43121 646 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 PPM1LQ5SGD2 360 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 ATAT1Q5SQI0 421 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 CCDC122Q5T0U0 273 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 KHDRBS2Q5VWX1 349 aaKnown RBP4.91□□□□□ -1.62
LRRK2-204ENST00000430804 BRAPQ7Z569 592 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 DSG4Q86SJ6 1040 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 CCDC13Q8IYE1 715 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 CMTR1Q8N1G2 835 aaKnown RBP4.91□□□□□ -1.62
LRRK2-204ENST00000430804 SRBD1Q8N5C6 995 aaKnown RBP4.91□□□□□ -1.62
LRRK2-204ENST00000430804 ANKRD13CQ8N6S4 541 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 PNMA1Q8ND90 353 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 EXOC6Q8TAG9 804 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 SSH1Q8WYL5 1049 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 PBXIP1Q96AQ6 731 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 NUP58Q9BVL2 599 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 GGT7Q9UJ14 662 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 PCDHA12Q9UN75 941 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 V9GY48 417 aaPredicted RBP4.91□□□□□ -1.62
LRRK2-204ENST00000430804 PZPP20742 1482 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 GLTPD2A6NH11 291 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 PSMD14O00487 310 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 KIAA0754O94854 1291 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 GAP43P17677 238 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 KIF23Q02241 960 aaPredicted RBP4.91□□□□□ -1.62
LRRK2-204ENST00000430804 CUL1Q13616 776 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 CEP85Q6P2H3 762 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 LEKR1Q6ZMV7 388 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 CCDC149Q6ZUS6 474 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 SCYL3Q8IZE3 742 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 ARHGAP18Q8N392 663 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 PNMA5Q96PV4 448 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 TCF25Q9BQ70 676 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 RGL1Q9NZL6 768 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 TJP2Q9UDY2 1190 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 SLC9A3R1O14745 358 aaPredicted RBP4.91□□□□□ -1.62
LRRK2-204ENST00000430804 PDE8BO95263 885 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 OR1G1P47890 313 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 DAB2P98082 770 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 PDE1BQ01064 536 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 CDR2Q01850 454 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 HLTFQ14527 1009 aaKnown RBP eCLIP4.91□□□□□ -1.62
LRRK2-204ENST00000430804 FAM151AQ8WW52 585 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 TMEM206Q9H813 350 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 CD209Q9NNX6 404 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 THOC2Q8NI27 1593 aaKnown RBP4.91□□□□□ -1.62
LRRK2-204ENST00000430804 NCK2O43639 380 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 TBC1D12O60347 775 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 AFMP43652 599 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 TRAPPC10P48553 1259 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 HDLBPQ00341 1268 aaKnown RBP4.91□□□□□ -1.62
LRRK2-204ENST00000430804 ELF2Q15723 593 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 CABP7Q86V35 215 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 OR6B3Q8NGW1 331 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 SLITRK1Q96PX8 696 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 ACCSQ96QU6 501 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 PANK2Q9BZ23 570 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 RAVER2Q9HCJ3 691 aaKnown RBP4.91□□□□□ -1.62
LRRK2-204ENST00000430804 ZNF70Q9UC06 446 aaPredicted RBP4.91□□□□□ -1.62
LRRK2-204ENST00000430804 SLC25A13Q9UJS0 675 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 NR2E1Q9Y466 385 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 K7ERI5 159 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 M0QYT0 321 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 NEMFO60524 1076 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 PPFIA4O75335 1185 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 GNSP15586 552 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 ZNF75DP51815 510 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 IRX4P78413 519 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 CALCOCO2Q13137 446 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 PPP2R5CQ13362 524 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 KRT40Q6A162 431 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 CASC4Q6P4E1 433 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 VPS52Q8N1B4 723 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 UBL4BQ8N7F7 174 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 PPP4R1Q8TF05 950 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 DCUN1D1Q96GG9 259 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 SLC32A1Q9H598 525 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 SENP2Q9HC62 589 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 FANCFQ9NPI8 374 aa4.91□□□□□ -1.62
LRRK2-204ENST00000430804 DDX25Q9UHL0 483 aaKnown RBP4.91□□□□□ -1.62
LRRK2-204ENST00000430804 PIN4Q9Y237 131 aaKnown RBP4.91□□□□□ -1.62
LRRK2-204ENST00000430804 ASAP2O43150 1006 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 ATICP31939 592 aa4.9□□□□□ -1.62
LRRK2-204ENST00000430804 MAP2K2P36507 400 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms