RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 TSPYL2Q9H2G4 693 aaPredicted RBP10.46□□□□□ -0.73
HDAC9-211ENST00000430454 TTYH1Q9H313 450 aaPredicted RBP10.46□□□□□ -0.73
HDAC9-211ENST00000430454 RTEL1Q9NZ71 1219 aa10.46□□□□□ -0.73
HDAC9-211ENST00000430454 KIAA1217Q5T5P2 1943 aa10.46□□□□□ -0.74
HDAC9-211ENST00000430454 SCN10AQ9Y5Y9 1956 aa10.46□□□□□ -0.74
HDAC9-211ENST00000430454 ABHD14A-ACY1A0A1B0GW23 586 aa10.45□□□□□ -0.74
HDAC9-211ENST00000430454 LGALS2P05162 132 aa10.45□□□□□ -0.74
HDAC9-211ENST00000430454 METAP2P50579 478 aaKnown RBP eCLIP10.45□□□□□ -0.74
HDAC9-211ENST00000430454 MRPS9P82933 396 aaKnown RBP10.45□□□□□ -0.74
HDAC9-211ENST00000430454 SP2Q02086 613 aa10.45□□□□□ -0.74
HDAC9-211ENST00000430454 MTMR1Q13613 665 aa10.45□□□□□ -0.74
HDAC9-211ENST00000430454 IKBKEQ14164 716 aa10.45□□□□□ -0.74
HDAC9-211ENST00000430454 ERICH6BQ5W0A0 696 aa10.45□□□□□ -0.74
HDAC9-211ENST00000430454 PPP2R2DQ66LE6 453 aa10.45□□□□□ -0.74
HDAC9-211ENST00000430454 CMTR1Q8N1G2 835 aaKnown RBP10.45□□□□□ -0.74
HDAC9-211ENST00000430454 ATP6V0A1Q93050 837 aa10.45□□□□□ -0.74
HDAC9-211ENST00000430454 JAKMIP1Q96N16 626 aaKnown RBP10.45□□□□□ -0.74
HDAC9-211ENST00000430454 SDF4Q9BRK5 362 aa10.45□□□□□ -0.74
HDAC9-211ENST00000430454 ZBED2Q9BTP6 218 aa10.45□□□□□ -0.74
HDAC9-211ENST00000430454 RIC8AQ9NPQ8 531 aa10.45□□□□□ -0.74
HDAC9-211ENST00000430454 CXXC1Q9P0U4 656 aaPredicted RBP10.45□□□□□ -0.74
HDAC9-211ENST00000430454 PCDHA6Q9UN73 950 aa10.45□□□□□ -0.74
HDAC9-211ENST00000430454 PCDHA8Q9Y5H6 950 aa10.45□□□□□ -0.74
HDAC9-211ENST00000430454 COL6A3P12111 3177 aa10.45□□□□□ -0.74
HDAC9-211ENST00000430454 SORBS3O60504 671 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 CKBP12277 381 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 HSPA4P34932 840 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 ZNF76P36508 570 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 THPOP40225 353 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 AP3B2Q13367 1082 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 GRIN2CQ14957 1233 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 CNKSR3Q6P9H4 555 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 RSPH3Q86UC2 560 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 SERINC5Q86VE9 423 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 RAB11FIP4Q86YS3 637 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.44□□□□□ -0.74
HDAC9-211ENST00000430454 RASEFQ8IZ41 740 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 BICD2Q8TD16 824 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 SEPT1Q8WYJ6 367 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 GPR20Q99678 358 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 C16orf70Q9BSU1 422 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 AZI2Q9H6S1 392 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 C6orf50Q9HD87 102 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 JADE2Q9NQC1 790 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 BARHL2Q9NY43 387 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 ERAP1Q9NZ08 941 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 TCEAL9Q9UHQ7 104 aa10.44□□□□□ -0.74
HDAC9-211ENST00000430454 V9GY48 417 aaPredicted RBP10.44□□□□□ -0.74
HDAC9-211ENST00000430454 NRCAMQ92823 1304 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 SMCO2A6NFE2 343 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 GRXCR1A8MXD5 290 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 RSPH10B2B2RC85 870 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 DLL1O00548 723 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 GTPBP6O43824 516 aaPredicted RBP10.43□□□□□ -0.74
HDAC9-211ENST00000430454 RSPH10BP0C881 870 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 SMIM10L2AP0DMW4 78 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 SMIM10L2BP0DMW5 78 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 GNA11P29992 359 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 PBX2P40425 430 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 UTP14CQ5TAP6 766 aaKnown RBP10.43□□□□□ -0.74
HDAC9-211ENST00000430454 TAF2Q6P1X5 1199 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 CPLX2Q6PUV4 134 aaKnown RBP10.43□□□□□ -0.74
HDAC9-211ENST00000430454 Q6ZUG5 572 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 HERC6Q8IVU3 1022 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 FBXL16Q8N461 479 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 CCDC148Q8NFR7 591 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 GLG1Q92896 1179 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 GPKOWQ92917 476 aaPredicted RBP eCLIP10.43□□□□□ -0.74
HDAC9-211ENST00000430454 KCNB2Q92953 911 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 NKX2-4Q9H2Z4 354 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 SMARCAD1Q9H4L7 1026 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 BRPF3Q9ULD4 1205 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 A0A0C4DFX4 3053 aa10.43□□□□□ -0.74
HDAC9-211ENST00000430454 BAZ2BQ9UIF8 2168 aaKnown RBP10.42□□□□□ -0.74
HDAC9-211ENST00000430454 CNTNAP5Q8WYK1 1306 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 hCG_1642624A0A1W2PR95 340 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 TLL1O43897 1013 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 LGR5O75473 907 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 CXCL10P02778 98 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 AMHP03971 560 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 RPS6KB1P23443 525 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 TCF7P36402 384 aaPredicted RBP10.42□□□□□ -0.74
HDAC9-211ENST00000430454 SP4Q02446 784 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 UBE2SQ16763 222 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 ADCK5Q3MIX3 580 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 CEP55Q53EZ4 464 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 WWC2Q6AWC2 1192 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 FAM43BQ6ZT52 329 aaPredicted RBP10.42□□□□□ -0.74
HDAC9-211ENST00000430454 TRIM22Q8IYM9 498 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 PPP1R13LQ8WUF5 828 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 SEPT8Q92599 483 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 SYMPKQ92797 1274 aaKnown RBP10.42□□□□□ -0.74
HDAC9-211ENST00000430454 APBB2Q92870 758 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 BRF1Q92994 677 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 ZFP91Q96JP5 570 aaPredicted RBP10.42□□□□□ -0.74
HDAC9-211ENST00000430454 MXRA8Q9BRK3 442 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 JPH1Q9HDC5 661 aaPredicted RBP10.42□□□□□ -0.74
HDAC9-211ENST00000430454 SNX14Q9Y5W7 946 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 UBIAD1Q9Y5Z9 338 aa10.42□□□□□ -0.74
HDAC9-211ENST00000430454 CYP46A1Q9Y6A2 500 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms