RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 COG5Q9UP83 839 aa17.19■□□□□ 0.34
MSH5-208ENST00000429846 SPATA31C2B4DYI2 1134 aa17.18■□□□□ 0.34
MSH5-208ENST00000429846 RFXAPO00287 272 aa17.18■□□□□ 0.34
MSH5-208ENST00000429846 PIK3CDO00329 1044 aa17.18■□□□□ 0.34
MSH5-208ENST00000429846 SORBS3O60504 671 aa17.18■□□□□ 0.34
MSH5-208ENST00000429846 LGR5O75473 907 aa17.18■□□□□ 0.34
MSH5-208ENST00000429846 MRPS9P82933 396 aaKnown RBP17.18■□□□□ 0.34
MSH5-208ENST00000429846 ZNF200P98182 395 aaPredicted RBP17.18■□□□□ 0.34
MSH5-208ENST00000429846 MBTPS1Q14703 1052 aa17.18■□□□□ 0.34
MSH5-208ENST00000429846 SKIV2LQ15477 1246 aaKnown RBP17.18■□□□□ 0.34
MSH5-208ENST00000429846 PCNX4Q63HM2 1172 aa17.18■□□□□ 0.34
MSH5-208ENST00000429846 ATP6V0A1Q93050 837 aa17.18■□□□□ 0.34
MSH5-208ENST00000429846 TMEM87BQ96K49 555 aa17.18■□□□□ 0.34
MSH5-208ENST00000429846 SENP7Q9BQF6 1050 aa17.18■□□□□ 0.34
MSH5-208ENST00000429846 LMCD1Q9NZU5 365 aa17.18■□□□□ 0.34
MSH5-208ENST00000429846 ZNF215Q9UL58 517 aaPredicted RBP17.18■□□□□ 0.34
MSH5-208ENST00000429846 MUC3AQ02505 3323 aa17.17■□□□□ 0.34
MSH5-208ENST00000429846 RSPH10B2B2RC85 870 aa17.17■□□□□ 0.34
MSH5-208ENST00000429846 RSPH10BP0C881 870 aa17.17■□□□□ 0.34
MSH5-208ENST00000429846 GNAT1P11488 350 aa17.17■□□□□ 0.34
MSH5-208ENST00000429846 MCM5P33992 734 aa17.17■□□□□ 0.34
MSH5-208ENST00000429846 THPOP40225 353 aa17.17■□□□□ 0.34
MSH5-208ENST00000429846 GRB10Q13322 594 aa17.17■□□□□ 0.34
MSH5-208ENST00000429846 HIC1Q14526 733 aa17.17■□□□□ 0.34
MSH5-208ENST00000429846 ZFP91Q96JP5 570 aaPredicted RBP17.17■□□□□ 0.34
MSH5-208ENST00000429846 LCHNA4D1U4 455 aa17.16■□□□□ 0.34
MSH5-208ENST00000429846 PRC1O43663 620 aa17.16■□□□□ 0.34
MSH5-208ENST00000429846 LPXNO60711 386 aa17.16■□□□□ 0.34
MSH5-208ENST00000429846 SMIM10L2AP0DMW4 78 aa17.16■□□□□ 0.34
MSH5-208ENST00000429846 SMIM10L2BP0DMW5 78 aa17.16■□□□□ 0.34
MSH5-208ENST00000429846 CALM1P0DP23 149 aa17.16■□□□□ 0.34
MSH5-208ENST00000429846 CALM2P0DP24 149 aa17.16■□□□□ 0.34
MSH5-208ENST00000429846 CALM3P0DP25 149 aa17.16■□□□□ 0.34
MSH5-208ENST00000429846 SEMA3FQ13275 785 aa17.16■□□□□ 0.34
MSH5-208ENST00000429846 CYFIP1Q7L576 1253 aa17.16■□□□□ 0.34
MSH5-208ENST00000429846 NLRX1Q86UT6 975 aa17.16■□□□□ 0.34
MSH5-208ENST00000429846 GIMAP8Q8ND71 665 aaPredicted RBP17.16■□□□□ 0.34
MSH5-208ENST00000429846 TGS1Q96RS0 853 aaKnown RBP17.16■□□□□ 0.34
MSH5-208ENST00000429846 GPR20Q99678 358 aa17.16■□□□□ 0.34
MSH5-208ENST00000429846 MYL10Q9BUA6 226 aa17.16■□□□□ 0.34
MSH5-208ENST00000429846 KAT6AQ92794 2004 aa17.16■□□□□ 0.34
MSH5-208ENST00000429846 TCF20Q9UGU0 1960 aaKnown RBP17.15■□□□□ 0.34
MSH5-208ENST00000429846 CCDC69A6NI79 296 aa17.15■□□□□ 0.34
MSH5-208ENST00000429846 MEIS2O14770 477 aa17.15■□□□□ 0.34
MSH5-208ENST00000429846 AMHP03971 560 aa17.15■□□□□ 0.34
MSH5-208ENST00000429846 BMP1P13497 986 aa17.15■□□□□ 0.34
MSH5-208ENST00000429846 LIFRP42702 1097 aa17.15■□□□□ 0.34
MSH5-208ENST00000429846 ERVK-21P61565 698 aa17.15■□□□□ 0.34
MSH5-208ENST00000429846 TFF2Q03403 129 aa17.15■□□□□ 0.34
MSH5-208ENST00000429846 MKRN4PQ13434 485 aaPredicted RBP17.15■□□□□ 0.34
MSH5-208ENST00000429846 TCTN1Q2MV58 587 aa17.15■□□□□ 0.34
MSH5-208ENST00000429846 USP17L6PQ6QN14 398 aa17.15■□□□□ 0.34
MSH5-208ENST00000429846 NFXL1Q6ZNB6 911 aa17.15■□□□□ 0.34
MSH5-208ENST00000429846 TMCO2Q7Z6W1 182 aaPredicted RBP17.15■□□□□ 0.34
MSH5-208ENST00000429846 PIBF1Q8WXW3 757 aa17.15■□□□□ 0.34
MSH5-208ENST00000429846 CDHR1Q96JP9 859 aa17.15■□□□□ 0.34
MSH5-208ENST00000429846 RNPEPQ9H4A4 650 aa17.15■□□□□ 0.34
MSH5-208ENST00000429846 RTEL1Q9NZ71 1219 aa17.15■□□□□ 0.34
MSH5-208ENST00000429846 INSL6Q9Y581 213 aa17.15■□□□□ 0.34
MSH5-208ENST00000429846 COL4A6Q14031 1691 aa17.15■□□□□ 0.34
MSH5-208ENST00000429846 BDP1A6H8Y1 2624 aa17.15■□□□□ 0.34
MSH5-208ENST00000429846 LINC01553A4QN01 128 aa17.14■□□□□ 0.33
MSH5-208ENST00000429846 SH2B2O14492 632 aaPredicted RBP17.14■□□□□ 0.33
MSH5-208ENST00000429846 TREHO43280 583 aa17.14■□□□□ 0.33
MSH5-208ENST00000429846 PLEKHG4Q58EX7 1191 aa17.14■□□□□ 0.33
MSH5-208ENST00000429846 KRT40Q6A162 431 aa17.14■□□□□ 0.33
MSH5-208ENST00000429846 DBF4BQ8NFT6 615 aa17.14■□□□□ 0.33
MSH5-208ENST00000429846 GDPD5Q8WTR4 605 aa17.14■□□□□ 0.33
MSH5-208ENST00000429846 GPRASP2Q96D09 838 aa17.14■□□□□ 0.33
MSH5-208ENST00000429846 LSG1Q9H089 658 aaKnown RBP17.14■□□□□ 0.33
MSH5-208ENST00000429846 SPRED2Q7Z698 418 aa17.13■□□□□ 0.33
MSH5-208ENST00000429846 MYOCDQ8IZQ8 938 aa17.13■□□□□ 0.33
MSH5-208ENST00000429846 SEPT8Q92599 483 aa17.13■□□□□ 0.33
MSH5-208ENST00000429846 APBB2Q92870 758 aa17.13■□□□□ 0.33
MSH5-208ENST00000429846 HLA-CQ95604 372 aa17.13■□□□□ 0.33
MSH5-208ENST00000429846 BCAS3Q9H6U6 928 aa17.13■□□□□ 0.33
MSH5-208ENST00000429846 REV3LO60673 3130 aa17.12■□□□□ 0.33
MSH5-208ENST00000429846 PLEKHA8P1O95397 391 aa17.12■□□□□ 0.33
MSH5-208ENST00000429846 KCNQ1P51787 676 aa17.12■□□□□ 0.33
MSH5-208ENST00000429846 IRX6P78412 446 aaPredicted RBP17.12■□□□□ 0.33
MSH5-208ENST00000429846 ADAM17P78536 824 aa17.12■□□□□ 0.33
MSH5-208ENST00000429846 HTRA4P83105 476 aaPredicted RBP17.12■□□□□ 0.33
MSH5-208ENST00000429846 TRIM50Q86XT4 487 aa17.12■□□□□ 0.33
MSH5-208ENST00000429846 TEX2Q8IWB9 1127 aa17.12■□□□□ 0.33
MSH5-208ENST00000429846 SRBD1Q8N5C6 995 aaKnown RBP17.12■□□□□ 0.33
MSH5-208ENST00000429846 SP7Q8TDD2 431 aaPredicted RBP17.12■□□□□ 0.33
MSH5-208ENST00000429846 ESYT1Q9BSJ8 1104 aa17.12■□□□□ 0.33
MSH5-208ENST00000429846 PSTPIP2Q9H939 334 aa17.12■□□□□ 0.33
MSH5-208ENST00000429846 SUGCTQ9HAC7 445 aa17.12■□□□□ 0.33
MSH5-208ENST00000429846 SETD4Q9NVD3 440 aa17.12■□□□□ 0.33
MSH5-208ENST00000429846 SLC12A7Q9Y666 1083 aa17.12■□□□□ 0.33
MSH5-208ENST00000429846 NRCAMQ92823 1304 aa17.12■□□□□ 0.33
MSH5-208ENST00000429846 BRWD1Q9NSI6 2320 aa17.12■□□□□ 0.33
MSH5-208ENST00000429846 SLC27A2O14975 620 aa17.11■□□□□ 0.33
MSH5-208ENST00000429846 FAM117BQ6P1L5 589 aa17.11■□□□□ 0.33
MSH5-208ENST00000429846 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
MSH5-208ENST00000429846 SGMS1Q86VZ5 419 aa17.11■□□□□ 0.33
MSH5-208ENST00000429846 LMBR1Q8WVP7 490 aa17.11■□□□□ 0.33
MSH5-208ENST00000429846 SAMD11Q96NU1 681 aa17.11■□□□□ 0.33
MSH5-208ENST00000429846 MTUS1Q9ULD2 1270 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms