RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 ZSCAN10Q96SZ4 725 aaPredicted RBP12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 FAM129AQ9BZQ8 928 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 TRIM31Q9BZY9 425 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 DPH5Q9H2P9 285 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 FBXO3Q9UK99 471 aa12.16□□□□□ -0.46
SEMA4D-209ENST00000429836 CNTNAP5Q8WYK1 1306 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 SART1O43290 800 aaKnown RBP12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 TLR2O60603 784 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 CAND2O75155 1236 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 CHN1P15882 459 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 PLCG1P19174 1290 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 DHX9Q08211 1270 aaKnown RBP12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 TROAPQ12815 778 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 NAB2Q15742 525 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 KIAA0895Q8NCT3 520 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 TBC1D5Q92609 795 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 ESR2Q92731 530 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 GPKOWQ92917 476 aaPredicted RBP eCLIP12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 ACSBG1Q96GR2 724 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 ISCA1Q9BUE6 129 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 TANGO6Q9C0B7 1094 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 NUP188Q5SRE5 1749 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 ZNF335Q9H4Z2 1342 aaPredicted RBP12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 NMT2O60551 498 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 CSF1RP07333 972 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 MMEP08473 750 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 ITGA4P13612 1032 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 ARID4AP29374 1257 aaPredicted RBP12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 ALDH5A1P51649 535 aaPredicted RBP12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 RCAN1P53805 252 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 CUL1Q13616 776 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 KIAA0753Q2KHM9 967 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 ARL6IP4Q66PJ3 421 aaKnown RBP12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 CRELD2Q6UXH1 353 aaPredicted RBP12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 TAX1BP1Q86VP1 789 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 KIF2BQ8N4N8 673 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 VGLL2Q8N8G2 317 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 TAF4BQ92750 862 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 ZNF317Q96PQ6 595 aaPredicted RBP12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 CELF4Q9BZC1 486 aaKnown RBP12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 RNF41Q9H4P4 317 aaPredicted RBP12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 NOP53Q9NZM5 478 aaKnown RBP12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 AMACRQ9UHK6 382 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 TMEM59LQ9UK28 342 aa12.15□□□□□ -0.46
SEMA4D-209ENST00000429836 MYH1P12882 1939 aa12.15□□□□□ -0.47
SEMA4D-209ENST00000429836 TIAM2Q8IVF5 1701 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 PDE8BO95263 885 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 SCG2P13521 617 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 TMC3Q7Z5M5 1100 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 ERICH1Q86X53 443 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 ANKS4BQ8N8V4 417 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 KCNV2Q8TDN2 545 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 ZNF512BQ96KM6 892 aaPredicted RBP12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 TRIM9Q9C026 710 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 ETAA1Q9NY74 926 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 ATP8A1Q9Y2Q0 1164 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 TLDC2A0PJX2 215 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 F8VZ95 297 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 UBOX5O94941 541 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 SHBGP04278 402 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 IFNAR2P48551 515 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 TRAPPC10P48553 1259 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 EVX2Q03828 476 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 ARHGEF10LQ9HCE6 1279 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 SWAP70Q9UH65 585 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 STK38LQ9Y2H1 464 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 THRAP3Q9Y2W1 955 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 CD2APQ9Y5K6 639 aa12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 PHRF1Q9P1Y6 1649 aaKnown RBP12.14□□□□□ -0.47
SEMA4D-209ENST00000429836 A0A087X0T9 212 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 VIMP08670 466 aaKnown RBP12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 FAM228BP0C875 321 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 ICA1Q05084 483 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 RIPK1Q13546 671 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 RPS6KA1Q15418 735 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 NBPF20Q3BBV1 942 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 TRPM8Q7Z2W7 1104 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 CCDC26Q8TAB7 109 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 KANSL2Q9H9L4 492 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 SLC5A4Q9NY91 659 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 ADAMTS1Q9UHI8 967 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 PCDHGC5Q9Y5F6 944 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 TTI1O43156 1089 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 LINGO3P0C6S8 592 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 UQCRFS1P1P0C7P4 283 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 NQO1P15559 274 aaKnown RBP12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 ABL2P42684 1182 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 MAN2A1Q16706 1144 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 KCNMB3Q9NPA1 279 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 GLI3P10071 1580 aa12.13□□□□□ -0.47
SEMA4D-209ENST00000429836 SSU72P8A0A1W2PR75 194 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 IGF2BP3O00425 579 aaKnown RBP eCLIP12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 HGSO14964 777 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 KCNMA1Q12791 1236 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 INF2Q27J81 1249 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 SLC9C1Q4G0N8 1177 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 ADGRA1Q86SQ6 560 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 BLIDQ8IZY5 108 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 SCFD2Q8WU76 684 aa12.12□□□□□ -0.47
SEMA4D-209ENST00000429836 TLCD1Q96CP7 247 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms