RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 EP400NLQ6ZTU2 488 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 IQCKQ8N0W5 287 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 SH3RF3Q8TEJ3 882 aaPredicted RBP9.74□□□□□ -0.85
CDH13-202ENST00000428848 ARL8AQ96BM9 186 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 CALML4Q96GE6 196 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 HINFPQ9BQA5 517 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 EHD4Q9H223 541 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 MKNK2Q9HBH9 465 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 C6orf50Q9HD87 102 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 SMARCAL1Q9NZC9 954 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 EHD2Q9NZN4 543 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 TSKSQ9UJT2 592 aa9.74□□□□□ -0.85
CDH13-202ENST00000428848 TTC36A6NLP5 189 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 KIF3CO14782 793 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 PPP1R12AO14974 1030 aaPredicted RBP9.73□□□□□ -0.85
CDH13-202ENST00000428848 NCK2O43639 380 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 FSBPO95073 299 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 GOLGA8HP0CJ92 632 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 SSR1P43307 286 aaKnown RBP9.73□□□□□ -0.85
CDH13-202ENST00000428848 NFIXQ14938 502 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 SLC4A8Q2Y0W8 1093 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 NBPF9Q3BBW0 867 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 FBXW10Q5XX13 1052 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 RRAGAQ7L523 313 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 MREGQ8N565 214 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 SLC44A5Q8NCS7 719 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 TBCKQ8TEA7 893 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 TBC1D22AQ8WUA7 517 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 LARP4BQ92615 738 aaKnown RBP9.73□□□□□ -0.85
CDH13-202ENST00000428848 SYN2Q92777 582 aaPredicted RBP9.73□□□□□ -0.85
CDH13-202ENST00000428848 MMRN2Q9H8L6 949 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 RBM12Q9NTZ6 932 aaKnown RBP9.73□□□□□ -0.85
CDH13-202ENST00000428848 CHUKO15111 745 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 TLR2O60603 784 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 NOL4O94818 638 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 CXCR5P32302 372 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 PAFAH1B1P43034 410 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 GFPT1Q06210 699 aaPredicted RBP9.73□□□□□ -0.85
CDH13-202ENST00000428848 PSMD2Q13200 908 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 TMEM119Q4V9L6 283 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 ZCWPW2Q504Y3 356 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 B4GALNT4Q76KP1 1039 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 CD302Q8IX05 232 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 ZNF444Q8N0Y2 327 aaPredicted RBP9.73□□□□□ -0.85
CDH13-202ENST00000428848 C1orf131Q8NDD1 294 aaKnown RBP9.73□□□□□ -0.85
CDH13-202ENST00000428848 ZIM3Q96PE6 472 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 NOX5Q96PH1 765 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 CPVLQ9H3G5 476 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 RIC8AQ9NPQ8 531 aa9.73□□□□□ -0.85
CDH13-202ENST00000428848 MYH4Q9Y623 1939 aa9.72□□□□□ -0.85
CDH13-202ENST00000428848 ERCC3P19447 782 aa9.72□□□□□ -0.85
CDH13-202ENST00000428848 ELF1P32519 619 aa9.72□□□□□ -0.85
CDH13-202ENST00000428848 SLC1A4P43007 532 aa9.72□□□□□ -0.85
CDH13-202ENST00000428848 GNGT1P63211 74 aa9.72□□□□□ -0.85
CDH13-202ENST00000428848 MRPS25P82663 173 aaKnown RBP9.72□□□□□ -0.85
CDH13-202ENST00000428848 RASSF7Q02833 373 aa9.72□□□□□ -0.85
CDH13-202ENST00000428848 PDIA5Q14554 519 aa9.72□□□□□ -0.85
CDH13-202ENST00000428848 C8orf74Q6P047 294 aa9.72□□□□□ -0.85
CDH13-202ENST00000428848 PROM2Q8N271 834 aa9.72□□□□□ -0.85
CDH13-202ENST00000428848 NEDD1Q8NHV4 660 aa9.72□□□□□ -0.85
CDH13-202ENST00000428848 BCAS4Q8TDM0 211 aa9.72□□□□□ -0.85
CDH13-202ENST00000428848 RAD54LQ92698 747 aa9.72□□□□□ -0.85
CDH13-202ENST00000428848 RIOX1Q9H6W3 641 aa9.72□□□□□ -0.85
CDH13-202ENST00000428848 GGA1Q9UJY5 639 aa9.72□□□□□ -0.85
CDH13-202ENST00000428848 STX8Q9UNK0 236 aa9.72□□□□□ -0.85
CDH13-202ENST00000428848 MYH7BA7E2Y1 1941 aa9.72□□□□□ -0.85
CDH13-202ENST00000428848 TNS1Q9HBL0 1735 aaKnown RBP9.71□□□□□ -0.85
CDH13-202ENST00000428848 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.71□□□□□ -0.85
CDH13-202ENST00000428848 GRID2IPA4D2P6 1211 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 hCG_1984214I3L0E3 225 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 HSF2BPO75031 334 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 GLI1P08151 1106 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 RDXP35241 583 aaKnown RBP9.71□□□□□ -0.85
CDH13-202ENST00000428848 TXKP42681 527 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 MATR3P43243 847 aaKnown RBP eCLIP9.71□□□□□ -0.85
CDH13-202ENST00000428848 FNTAP49354 379 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 MARSP56192 900 aaKnown RBP9.71□□□□□ -0.85
CDH13-202ENST00000428848 APBA1Q02410 837 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 CRY2Q49AN0 593 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 CFAP221Q4G0U5 840 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 CCDC181Q5TID7 509 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 C16orf86Q6ZW13 317 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 PTF1AQ7RTS3 328 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 IFT20Q8IY31 132 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 ZNF713Q8N859 430 aaPredicted RBP9.71□□□□□ -0.85
CDH13-202ENST00000428848 PIK3R5Q8WYR1 880 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 DNAJC19Q96DA6 116 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 NUDT12Q9BQG2 462 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 PAGR1Q9BTK6 254 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 NUCKS1Q9H1E3 243 aaKnown RBP9.71□□□□□ -0.85
CDH13-202ENST00000428848 TMX4Q9H1E5 349 aaPredicted RBP9.71□□□□□ -0.85
CDH13-202ENST00000428848 CEP72Q9P209 647 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 MCM8Q9UJA3 840 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 JAG2Q9Y219 1238 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 PCDHGC5Q9Y5F6 944 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 KIF13BQ9NQT8 1826 aa9.71□□□□□ -0.85
CDH13-202ENST00000428848 TNRC6CQ9HCJ0 1690 aaKnown RBP9.71□□□□□ -0.86
CDH13-202ENST00000428848 BUB1O43683 1085 aa9.71□□□□□ -0.86
CDH13-202ENST00000428848 ZEB2O60315 1214 aa9.71□□□□□ -0.86
CDH13-202ENST00000428848 SERPING1P05155 500 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms