RNA–Protein interactions for RNA: ENST00000428835.5

HLA-DPB1-212, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

APPRIS ALT2

Gene HLA-DPB1, Length 688 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-212ENST00000428835 SP4Q02446 784 aa23.03■■□□□ 1.28
HLA-DPB1-212ENST00000428835 TLE2Q04725 743 aa23.03■■□□□ 1.28
HLA-DPB1-212ENST00000428835 TNRC18O15417 2968 aaPredicted RBP23.02■■□□□ 1.28
HLA-DPB1-212ENST00000428835 H0YGN5 161 aa23.02■■□□□ 1.28
HLA-DPB1-212ENST00000428835 MMP1P03956 469 aa23.02■■□□□ 1.28
HLA-DPB1-212ENST00000428835 CDK7P50613 346 aa23.02■■□□□ 1.28
HLA-DPB1-212ENST00000428835 CHMP4BP1P59074 171 aa23.02■■□□□ 1.28
HLA-DPB1-212ENST00000428835 PRR16Q569H4 304 aa23.02■■□□□ 1.28
HLA-DPB1-212ENST00000428835 SDF4Q9BRK5 362 aa23.02■■□□□ 1.28
HLA-DPB1-212ENST00000428835 AGO4Q9HCK5 861 aaKnown RBP23.02■■□□□ 1.28
HLA-DPB1-212ENST00000428835 IGLV3-22A0A075B6J6 115 aa23.01■■□□□ 1.27
HLA-DPB1-212ENST00000428835 DCDC2CA8MYV0 355 aa23.01■■□□□ 1.27
HLA-DPB1-212ENST00000428835 SETQ01105 290 aaPredicted RBP23.01■■□□□ 1.27
HLA-DPB1-212ENST00000428835 GUCY1B3Q02153 619 aa23.01■■□□□ 1.27
HLA-DPB1-212ENST00000428835 SAFBQ15424 915 aaKnown RBP eCLIP23.01■■□□□ 1.27
HLA-DPB1-212ENST00000428835 INF2Q27J81 1249 aa23.01■■□□□ 1.27
HLA-DPB1-212ENST00000428835 PIK3AP1Q6ZUJ8 805 aa23.01■■□□□ 1.27
HLA-DPB1-212ENST00000428835 ANKRD33Q7Z3H0 272 aa23.01■■□□□ 1.27
HLA-DPB1-212ENST00000428835 SLC43A3Q8NBI5 491 aa23.01■■□□□ 1.27
HLA-DPB1-212ENST00000428835 TOX2Q96NM4 488 aa23.01■■□□□ 1.27
HLA-DPB1-212ENST00000428835 GPR20Q99678 358 aa23.01■■□□□ 1.27
HLA-DPB1-212ENST00000428835 SEZ6LQ9BYH1 1024 aa23.01■■□□□ 1.27
HLA-DPB1-212ENST00000428835 ZMYND8Q9ULU4 1186 aaPredicted RBP23.01■■□□□ 1.27
HLA-DPB1-212ENST00000428835 GRIN2DO15399 1336 aa23.01■■□□□ 1.27
HLA-DPB1-212ENST00000428835 MROH7Q68CQ1 1323 aa23.01■■□□□ 1.27
HLA-DPB1-212ENST00000428835 BTBD18B2RXH4 712 aa23■■□□□ 1.27
HLA-DPB1-212ENST00000428835 EDIL3O43854 480 aa23■■□□□ 1.27
HLA-DPB1-212ENST00000428835 ZNF286BP0CG31 522 aa23■■□□□ 1.27
HLA-DPB1-212ENST00000428835 HOXD8P13378 290 aaPredicted RBP23■■□□□ 1.27
HLA-DPB1-212ENST00000428835 NR5A1Q13285 461 aa23■■□□□ 1.27
HLA-DPB1-212ENST00000428835 NBPF20Q3BBV1 942 aa23■■□□□ 1.27
HLA-DPB1-212ENST00000428835 DIS3L2Q8IYB7 885 aaKnown RBP23■■□□□ 1.27
HLA-DPB1-212ENST00000428835 ZNF577Q9BSK1 485 aa23■■□□□ 1.27
HLA-DPB1-212ENST00000428835 JPH1Q9HDC5 661 aaPredicted RBP23■■□□□ 1.27
HLA-DPB1-212ENST00000428835 PRKAG2Q9UGJ0 569 aa23■■□□□ 1.27
HLA-DPB1-212ENST00000428835 KIF3AQ9Y496 699 aa23■■□□□ 1.27
HLA-DPB1-212ENST00000428835 MYH7BA7E2Y1 1941 aa23■■□□□ 1.27
HLA-DPB1-212ENST00000428835 SYN1P17600 705 aa22.99■■□□□ 1.27
HLA-DPB1-212ENST00000428835 KAT2BQ92831 832 aa22.99■■□□□ 1.27
HLA-DPB1-212ENST00000428835 UIMC1Q96RL1 719 aa22.99■■□□□ 1.27
HLA-DPB1-212ENST00000428835 KATNAL1Q9BW62 490 aa22.99■■□□□ 1.27
HLA-DPB1-212ENST00000428835 PRDM5Q9NQX1 630 aaPredicted RBP22.99■■□□□ 1.27
HLA-DPB1-212ENST00000428835 SLC9A2Q9UBY0 812 aa22.99■■□□□ 1.27
HLA-DPB1-212ENST00000428835 TELO2Q9Y4R8 837 aa22.99■■□□□ 1.27
HLA-DPB1-212ENST00000428835 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.99■■□□□ 1.27
HLA-DPB1-212ENST00000428835 NFASCO94856 1347 aa22.99■■□□□ 1.27
HLA-DPB1-212ENST00000428835 ALPK3Q96L96 1907 aa22.98■■□□□ 1.27
HLA-DPB1-212ENST00000428835 IPO5O00410 1097 aaKnown RBP22.98■■□□□ 1.27
HLA-DPB1-212ENST00000428835 TLR3O15455 904 aaKnown RBP22.98■■□□□ 1.27
HLA-DPB1-212ENST00000428835 CLTBP09497 229 aa22.98■■□□□ 1.27
HLA-DPB1-212ENST00000428835 ITGB3BPQ13352 177 aaPredicted RBP22.98■■□□□ 1.27
HLA-DPB1-212ENST00000428835 LETM2Q2VYF4 491 aa22.98■■□□□ 1.27
HLA-DPB1-212ENST00000428835 FAM47CQ5HY64 1035 aa22.98■■□□□ 1.27
HLA-DPB1-212ENST00000428835 PRPF38BQ5VTL8 546 aaKnown RBP22.98■■□□□ 1.27
HLA-DPB1-212ENST00000428835 NEK8Q86SG6 692 aa22.98■■□□□ 1.27
HLA-DPB1-212ENST00000428835 FBXO18Q8NFZ0 1043 aa22.98■■□□□ 1.27
HLA-DPB1-212ENST00000428835 SEPT1Q8WYJ6 367 aa22.98■■□□□ 1.27
HLA-DPB1-212ENST00000428835 F2P00734 622 aa22.97■■□□□ 1.27
HLA-DPB1-212ENST00000428835 LGALS2P05162 132 aa22.97■■□□□ 1.27
HLA-DPB1-212ENST00000428835 PSEN2P49810 448 aa22.97■■□□□ 1.27
HLA-DPB1-212ENST00000428835 FAAP100Q0VG06 881 aa22.97■■□□□ 1.27
HLA-DPB1-212ENST00000428835 MFSD10Q14728 455 aa22.97■■□□□ 1.27
HLA-DPB1-212ENST00000428835 EARS2Q5JPH6 523 aaKnown RBP22.97■■□□□ 1.27
HLA-DPB1-212ENST00000428835 UTP14CQ5TAP6 766 aaKnown RBP22.97■■□□□ 1.27
HLA-DPB1-212ENST00000428835 NFRKBQ6P4R8 1299 aa22.97■■□□□ 1.27
HLA-DPB1-212ENST00000428835 PPP1R13LQ8WUF5 828 aa22.97■■□□□ 1.27
HLA-DPB1-212ENST00000428835 TNFRSF25Q93038 417 aa22.97■■□□□ 1.27
HLA-DPB1-212ENST00000428835 LENG9Q96B70 501 aa22.97■■□□□ 1.27
HLA-DPB1-212ENST00000428835 C16orf70Q9BSU1 422 aa22.97■■□□□ 1.27
HLA-DPB1-212ENST00000428835 TMEM39AQ9NV64 488 aa22.97■■□□□ 1.27
HLA-DPB1-212ENST00000428835 SMC3Q9UQE7 1217 aa22.97■■□□□ 1.27
HLA-DPB1-212ENST00000428835 CYP3A7-CYP3A51PA0A087WV96 503 aa22.96■■□□□ 1.27
HLA-DPB1-212ENST00000428835 DDX39AO00148 427 aaKnown RBP22.96■■□□□ 1.27
HLA-DPB1-212ENST00000428835 TDP2O95551 362 aa22.96■■□□□ 1.27
HLA-DPB1-212ENST00000428835 CYP3A7P24462 503 aa22.96■■□□□ 1.27
HLA-DPB1-212ENST00000428835 GJB2P29033 226 aa22.96■■□□□ 1.27
HLA-DPB1-212ENST00000428835 KIAA0753Q2KHM9 967 aa22.96■■□□□ 1.27
HLA-DPB1-212ENST00000428835 Q4G0T1 1027 aa22.96■■□□□ 1.27
HLA-DPB1-212ENST00000428835 MOXD1Q6UVY6 613 aa22.96■■□□□ 1.27
HLA-DPB1-212ENST00000428835 FAM126BQ8IXS8 530 aa22.96■■□□□ 1.27
HLA-DPB1-212ENST00000428835 PDLIM7Q9NR12 457 aa22.96■■□□□ 1.27
HLA-DPB1-212ENST00000428835 TBC1D22BQ9NU19 505 aa22.96■■□□□ 1.27
HLA-DPB1-212ENST00000428835 GSTTP1A0A1W2PQM5 241 aa22.95■■□□□ 1.26
HLA-DPB1-212ENST00000428835 FAM205CA6NFA0 338 aa22.95■■□□□ 1.26
HLA-DPB1-212ENST00000428835 H3BRB1 525 aa22.95■■□□□ 1.26
HLA-DPB1-212ENST00000428835 MSH4O15457 936 aa22.95■■□□□ 1.26
HLA-DPB1-212ENST00000428835 TCF7P36402 384 aaPredicted RBP22.95■■□□□ 1.26
HLA-DPB1-212ENST00000428835 GNL2Q13823 731 aaKnown RBP22.95■■□□□ 1.26
HLA-DPB1-212ENST00000428835 SH3RF1Q7Z6J0 888 aa22.95■■□□□ 1.26
HLA-DPB1-212ENST00000428835 C7orf31Q8N865 590 aa22.95■■□□□ 1.26
HLA-DPB1-212ENST00000428835 TRPV6Q9H1D0 765 aa22.95■■□□□ 1.26
HLA-DPB1-212ENST00000428835 TUT1Q9H6E5 874 aaKnown RBP22.95■■□□□ 1.26
HLA-DPB1-212ENST00000428835 DDX25Q9UHL0 483 aaKnown RBP22.95■■□□□ 1.26
HLA-DPB1-212ENST00000428835 TCEAL9Q9UHQ7 104 aa22.95■■□□□ 1.26
HLA-DPB1-212ENST00000428835 DNAH12Q6ZR08 3092 aa22.94■■□□□ 1.26
HLA-DPB1-212ENST00000428835 TRIM43BA6NCK2 446 aa22.94■■□□□ 1.26
HLA-DPB1-212ENST00000428835 HAS3O00219 553 aa22.94■■□□□ 1.26
HLA-DPB1-212ENST00000428835 DHX15O43143 795 aaKnown RBP22.94■■□□□ 1.26
HLA-DPB1-212ENST00000428835 CCNT1O60563 726 aaKnown RBP22.94■■□□□ 1.26
HLA-DPB1-212ENST00000428835 ACTR2P61160 394 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms