RNA–Protein interactions for RNA: ENST00000427741.5

CNTN4-206, Transcript of contactin 4, humanhuman

TSL 2

Gene CNTN4, Length 3,057 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-206ENST00000427741 FRMD3A2A2Y4 597 aa16.41■□□□□ 0.22
CNTN4-206ENST00000427741 SMCO2A6NFE2 343 aa16.41■□□□□ 0.22
CNTN4-206ENST00000427741 FAM228BP0C875 321 aa16.41■□□□□ 0.22
CNTN4-206ENST00000427741 PDHBP11177 359 aa16.41■□□□□ 0.22
CNTN4-206ENST00000427741 HSD17B3P37058 310 aa16.41■□□□□ 0.22
CNTN4-206ENST00000427741 UAP1Q16222 522 aaPredicted RBP16.41■□□□□ 0.22
CNTN4-206ENST00000427741 ARHGAP27Q6ZUM4 889 aa16.41■□□□□ 0.22
CNTN4-206ENST00000427741 KIRREL3Q8IZU9 778 aa16.41■□□□□ 0.22
CNTN4-206ENST00000427741 OR2W6PQ8NHA6 318 aa16.41■□□□□ 0.22
CNTN4-206ENST00000427741 TBCKQ8TEA7 893 aa16.41■□□□□ 0.22
CNTN4-206ENST00000427741 CRKLP46109 303 aaKnown RBP16.4■□□□□ 0.22
CNTN4-206ENST00000427741 SLC18A3Q16572 532 aa16.4■□□□□ 0.22
CNTN4-206ENST00000427741 CCDC40Q4G0X9 1142 aa16.4■□□□□ 0.22
CNTN4-206ENST00000427741 ISCUQ9H1K1 167 aa16.4■□□□□ 0.22
CNTN4-206ENST00000427741 POLR2FP61218 127 aaKnown RBP16.4■□□□□ 0.22
CNTN4-206ENST00000427741 PLCB4Q15147 1175 aa16.4■□□□□ 0.22
CNTN4-206ENST00000427741 KIAA0753Q2KHM9 967 aa16.4■□□□□ 0.22
CNTN4-206ENST00000427741 N4BP2L2Q92802 583 aaPredicted RBP16.4■□□□□ 0.22
CNTN4-206ENST00000427741 MTMR9Q96QG7 549 aa16.4■□□□□ 0.22
CNTN4-206ENST00000427741 TMEM47Q9BQJ4 181 aa16.4■□□□□ 0.22
CNTN4-206ENST00000427741 STK17AQ9UEE5 414 aa16.4■□□□□ 0.22
CNTN4-206ENST00000427741 SLC12A6Q9UHW9 1150 aa16.4■□□□□ 0.22
CNTN4-206ENST00000427741 KLRF2D3W0D1 207 aa16.39■□□□□ 0.22
CNTN4-206ENST00000427741 TNNC1P63316 161 aa16.39■□□□□ 0.22
CNTN4-206ENST00000427741 PTPROQ16827 1216 aa16.39■□□□□ 0.22
CNTN4-206ENST00000427741 ZCWPW2Q504Y3 356 aa16.39■□□□□ 0.22
CNTN4-206ENST00000427741 LRIG3Q6UXM1 1119 aa16.39■□□□□ 0.22
CNTN4-206ENST00000427741 NUCKS1Q9H1E3 243 aaKnown RBP16.39■□□□□ 0.22
CNTN4-206ENST00000427741 E2F5Q15329 346 aa16.39■□□□□ 0.21
CNTN4-206ENST00000427741 KCNK18Q7Z418 384 aa16.39■□□□□ 0.21
CNTN4-206ENST00000427741 DDX12PQ92771 950 aa16.39■□□□□ 0.21
CNTN4-206ENST00000427741 NUDT12Q9BQG2 462 aa16.39■□□□□ 0.21
CNTN4-206ENST00000427741 LSM14BQ9BX40 385 aaKnown RBP16.39■□□□□ 0.21
CNTN4-206ENST00000427741 SLC40A1Q9NP59 571 aa16.39■□□□□ 0.21
CNTN4-206ENST00000427741 ADAMTS1Q9UHI8 967 aa16.39■□□□□ 0.21
CNTN4-206ENST00000427741 STX8Q9UNK0 236 aa16.39■□□□□ 0.21
CNTN4-206ENST00000427741 COL4A3BPQ9Y5P4 624 aa16.39■□□□□ 0.21
CNTN4-206ENST00000427741 GCOM1H8Y6P7 765 aaPredicted RBP16.39■□□□□ 0.21
CNTN4-206ENST00000427741 MYZAPP0CAP1 466 aa16.39■□□□□ 0.21
CNTN4-206ENST00000427741 ARID5AQ03989 594 aa16.39■□□□□ 0.21
CNTN4-206ENST00000427741 HLTFQ14527 1009 aaKnown RBP eCLIP16.39■□□□□ 0.21
CNTN4-206ENST00000427741 SLC44A5Q8NCS7 719 aa16.39■□□□□ 0.21
CNTN4-206ENST00000427741 SCLT1Q96NL6 688 aa16.39■□□□□ 0.21
CNTN4-206ENST00000427741 RIC8AQ9NPQ8 531 aa16.39■□□□□ 0.21
CNTN4-206ENST00000427741 LUC7LQ9NQ29 371 aaKnown RBP16.39■□□□□ 0.21
CNTN4-206ENST00000427741 TFCP2L1Q9NZI6 479 aa16.39■□□□□ 0.21
CNTN4-206ENST00000427741 DDX20Q9UHI6 824 aaKnown RBP16.39■□□□□ 0.21
CNTN4-206ENST00000427741 JAG2Q9Y219 1238 aa16.39■□□□□ 0.21
CNTN4-206ENST00000427741 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.39■□□□□ 0.21
CNTN4-206ENST00000427741 CHUKO15111 745 aa16.38■□□□□ 0.21
CNTN4-206ENST00000427741 TSPY3P0CV98 308 aa16.38■□□□□ 0.21
CNTN4-206ENST00000427741 TSPY8P0CW00 308 aa16.38■□□□□ 0.21
CNTN4-206ENST00000427741 ZNF844Q08AG5 666 aa16.38■□□□□ 0.21
CNTN4-206ENST00000427741 ERFEQ4G0M1 354 aa16.38■□□□□ 0.21
CNTN4-206ENST00000427741 DDX42Q86XP3 938 aaKnown RBP eCLIP16.38■□□□□ 0.21
CNTN4-206ENST00000427741 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.38■□□□□ 0.21
CNTN4-206ENST00000427741 RAD54LQ92698 747 aa16.38■□□□□ 0.21
CNTN4-206ENST00000427741 CELF1Q92879 486 aaKnown RBP16.38■□□□□ 0.21
CNTN4-206ENST00000427741 CCDC114Q96M63 670 aa16.38■□□□□ 0.21
CNTN4-206ENST00000427741 TSG101Q99816 390 aa16.38■□□□□ 0.21
CNTN4-206ENST00000427741 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.38■□□□□ 0.21
CNTN4-206ENST00000427741 NEUROG2Q9H2A3 272 aa16.38■□□□□ 0.21
CNTN4-206ENST00000427741 KANSL2Q9H9L4 492 aa16.38■□□□□ 0.21
CNTN4-206ENST00000427741 MKNK2Q9HBH9 465 aa16.38■□□□□ 0.21
CNTN4-206ENST00000427741 C6orf50Q9HD87 102 aa16.38■□□□□ 0.21
CNTN4-206ENST00000427741 BIN2Q9UBW5 565 aaPredicted RBP16.38■□□□□ 0.21
CNTN4-206ENST00000427741 GOLGA6L10A6NI86 522 aa16.38■□□□□ 0.21
CNTN4-206ENST00000427741 ENOX2Q16206 610 aaKnown RBP16.38■□□□□ 0.21
CNTN4-206ENST00000427741 QPCTQ16769 361 aa16.38■□□□□ 0.21
CNTN4-206ENST00000427741 PROM2Q8N271 834 aa16.38■□□□□ 0.21
CNTN4-206ENST00000427741 EIF1ADQ8N9N8 165 aaKnown RBP16.38■□□□□ 0.21
CNTN4-206ENST00000427741 SPZ1Q9BXG8 430 aa16.38■□□□□ 0.21
CNTN4-206ENST00000427741 TMEM260Q9NX78 707 aa16.38■□□□□ 0.21
CNTN4-206ENST00000427741 BCCIPQ9P287 314 aaKnown RBP eCLIP16.38■□□□□ 0.21
CNTN4-206ENST00000427741 GMNCA6NCL1 334 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 POTEMA6NI47 508 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 KCNK3O14649 394 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 TRAPPC3O43617 180 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 GNA11P29992 359 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 DRP2Q13474 957 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 ARFGAP2Q8N6H7 521 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 OSBPL7Q9BZF2 842 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 BHMG1C9JSJ3 638 aaPredicted RBP16.37■□□□□ 0.21
CNTN4-206ENST00000427741 SLC37A4O43826 429 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 TMOD1P28289 359 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 FXR2P51116 673 aaKnown RBP eCLIP16.37■□□□□ 0.21
CNTN4-206ENST00000427741 FKBP3Q00688 224 aaKnown RBP16.37■□□□□ 0.21
CNTN4-206ENST00000427741 RAPGEF1Q13905 1077 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 FOXR2Q6PJQ5 311 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 FAM133AQ8N9E0 248 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 SCFD2Q8WU76 684 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 LZTS2Q9BRK4 669 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 GOLPH3Q9H4A6 298 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 DNM1LO00429 736 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 TRAF5O00463 557 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 EDIL3O43854 480 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 PSMD2Q13200 908 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 SF3B3Q15393 1217 aaKnown RBP16.37■□□□□ 0.21
CNTN4-206ENST00000427741 CALCRLQ16602 461 aa16.37■□□□□ 0.21
CNTN4-206ENST00000427741 MYOCDQ8IZQ8 938 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms