RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 ATP8B1O43520 1251 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 TADA3O75528 432 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 TDP2O95551 362 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 SLURP2P0DP57 97 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 INPP5BP32019 993 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 PABPC4Q13310 644 aaKnown RBP eCLIP9.51□□□□□ -0.89
SH3D19-204ENST00000427414 ERO1BQ86YB8 467 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 CDAN1Q8IWY9 1227 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 GIMAP8Q8ND71 665 aaPredicted RBP9.51□□□□□ -0.89
SH3D19-204ENST00000427414 RAD54LQ92698 747 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 KIFC2Q96AC6 838 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 RPAP3Q9H6T3 665 aaPredicted RBP9.51□□□□□ -0.89
SH3D19-204ENST00000427414 CSADQ9Y600 493 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 BICDL2A1A5D9 508 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 LRRC10BA6NIK2 292 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 SASH3O75995 380 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 ZNF18P17022 549 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 TECP42680 631 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 SPIRE1Q08AE8 756 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 GRB10Q13322 594 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 PPIL2Q13356 520 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 SMC1AQ14683 1233 aaKnown RBP9.5□□□□□ -0.89
SH3D19-204ENST00000427414 ZSCAN26Q16670 478 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 MUM1L1Q5H9M0 696 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 USP17L6PQ6QN14 398 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 B3GNT9Q6UX72 402 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 UNC13DQ70J99 1090 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 CDK5RAP3Q96JB5 506 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 BMP2KQ9NSY1 1161 aaPredicted RBP9.5□□□□□ -0.89
SH3D19-204ENST00000427414 CTDP1Q9Y5B0 961 aaPredicted RBP9.5□□□□□ -0.89
SH3D19-204ENST00000427414 SNCAIPQ9Y6H5 919 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 SPDYE5A6NIY4 337 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 KLRC4O43908 158 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 DDNO94850 711 aaPredicted RBP9.5□□□□□ -0.89
SH3D19-204ENST00000427414 TBC1D8O95759 1140 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 PLCG1P19174 1290 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 EPHX2P34913 555 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 TXKP42681 527 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 SPP2Q13103 211 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 MTMR2Q13614 643 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 CEP55Q53EZ4 464 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 SPECC1Q5M775 1068 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 TRIM65Q6PJ69 517 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 ARMC9Q7Z3E5 817 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 LARP4BQ92615 738 aaKnown RBP9.5□□□□□ -0.89
SH3D19-204ENST00000427414 IQCDQ96DY2 449 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 SENP7Q9BQF6 1050 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 MXRA8Q9BRK3 442 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 TIPINQ9BVW5 301 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 TRIM9Q9C026 710 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 RASSF4Q9H2L5 321 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 UBIAD1Q9Y5Z9 338 aa9.5□□□□□ -0.89
SH3D19-204ENST00000427414 A0A0G2JLL6 359 aaPredicted RBP9.49□□□□□ -0.89
SH3D19-204ENST00000427414 PPP1R3GB7ZBB8 358 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 LYPLA2O95372 231 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 BMP6P22004 513 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 EHHADHQ08426 723 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 KARSQ15046 597 aaKnown RBP9.49□□□□□ -0.89
SH3D19-204ENST00000427414 FASTKD5Q7L8L6 764 aaKnown RBP9.49□□□□□ -0.89
SH3D19-204ENST00000427414 PRRT2Q7Z6L0 340 aaPredicted RBP9.49□□□□□ -0.89
SH3D19-204ENST00000427414 C10orf67Q8IYJ2 551 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 SPICE1Q8N0Z3 855 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 CDHR1Q96JP9 859 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 PNMA5Q96PV4 448 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 IWS1Q96ST2 819 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 MTRQ99707 1265 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 TBC1D22BQ9NU19 505 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 ASTN2O75129 1339 aaPredicted RBP9.49□□□□□ -0.89
SH3D19-204ENST00000427414 FRMD3A2A2Y4 597 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 RAD21O60216 631 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 MARCH6O60337 910 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 PSMD10O75832 226 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 FLOT1O75955 427 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 FGFR1OPO95684 399 aaKnown RBP9.49□□□□□ -0.89
SH3D19-204ENST00000427414 PRR29P0C7W0 189 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 FANCCQ00597 558 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 ISM2Q6H9L7 571 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 CC2D1AQ6P1N0 951 aaPredicted RBP9.49□□□□□ -0.89
SH3D19-204ENST00000427414 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.49□□□□□ -0.89
SH3D19-204ENST00000427414 ADSSL1Q8N142 457 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 PDILTQ8N807 584 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 DNERQ8NFT8 737 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 GLIS2Q9BZE0 524 aaPredicted RBP9.49□□□□□ -0.89
SH3D19-204ENST00000427414 UBXN6Q9BZV1 441 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 BLOC1S4Q9NUP1 217 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 CWC15Q9P013 229 aaKnown RBP9.49□□□□□ -0.89
SH3D19-204ENST00000427414 RSPH14Q9UHP6 348 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 VAV3Q9UKW4 847 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 PFASO15067 1338 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 COL11A1P12107 1806 aaPredicted RBP9.49□□□□□ -0.89
SH3D19-204ENST00000427414 B4DLN1 442 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 SCP2P22307 547 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 GYS2P54840 703 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 EPHA7Q15375 998 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 USH1GQ495M9 461 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 LDLRAD1Q5T700 205 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 CDKAL1Q5VV42 579 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 RASSF8Q8NHQ8 419 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 SNX29Q8TEQ0 813 aa9.49□□□□□ -0.89
SH3D19-204ENST00000427414 TEX13BQ9BXU2 312 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms