RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 USP53Q70EK8 1073 aa5.71□□□□□ -1.5
LINC02541-201ENST00000427157 PIP4K2CQ8TBX8 421 aa5.71□□□□□ -1.5
LINC02541-201ENST00000427157 WRNIP1Q96S55 665 aa5.71□□□□□ -1.5
LINC02541-201ENST00000427157 PHF20Q9BVI0 1012 aa5.71□□□□□ -1.5
LINC02541-201ENST00000427157 JAM3Q9BX67 310 aa5.71□□□□□ -1.5
LINC02541-201ENST00000427157 TMEM168Q9H0V1 697 aa5.71□□□□□ -1.5
LINC02541-201ENST00000427157 SLC6A20Q9NP91 592 aa5.71□□□□□ -1.5
LINC02541-201ENST00000427157 PPP4R1LQ9P1A2 415 aa5.71□□□□□ -1.5
LINC02541-201ENST00000427157 ASH2LQ9UBL3 628 aa5.71□□□□□ -1.5
LINC02541-201ENST00000427157 C1QTNF3-AMACRE9PGA6 284 aa5.7□□□□□ -1.5
LINC02541-201ENST00000427157 MATN3O15232 486 aa5.7□□□□□ -1.5
LINC02541-201ENST00000427157 MAFKO60675 156 aa5.7□□□□□ -1.5
LINC02541-201ENST00000427157 CYP7B1O75881 506 aa5.7□□□□□ -1.5
LINC02541-201ENST00000427157 DNAJA1P31689 397 aaKnown RBP5.7□□□□□ -1.5
LINC02541-201ENST00000427157 PLEKHH3Q7Z736 793 aa5.7□□□□□ -1.5
LINC02541-201ENST00000427157 TTLL11Q8NHH1 800 aa5.7□□□□□ -1.5
LINC02541-201ENST00000427157 ST6GALNAC2Q9UJ37 374 aa5.7□□□□□ -1.5
LINC02541-201ENST00000427157 R3HCC1Q9Y3T6 440 aaKnown RBP5.7□□□□□ -1.5
LINC02541-201ENST00000427157 SLC27A2O14975 620 aa5.69□□□□□ -1.5
LINC02541-201ENST00000427157 COL6A1P12109 1028 aa5.69□□□□□ -1.5
LINC02541-201ENST00000427157 SURF1Q15526 300 aa5.69□□□□□ -1.5
LINC02541-201ENST00000427157 TRMT10BQ6PF06 316 aaKnown RBP5.69□□□□□ -1.5
LINC02541-201ENST00000427157 RSPO2Q6UXX9 243 aaPredicted RBP5.69□□□□□ -1.5
LINC02541-201ENST00000427157 ANKS3Q6ZW76 656 aa5.69□□□□□ -1.5
LINC02541-201ENST00000427157 PROSER1Q86XN7 944 aa5.69□□□□□ -1.5
LINC02541-201ENST00000427157 CHST13Q8NET6 341 aa5.69□□□□□ -1.5
LINC02541-201ENST00000427157 IGDCC4Q8TDY8 1250 aa5.69□□□□□ -1.5
LINC02541-201ENST00000427157 ARHGEF4Q9NR80 690 aa5.69□□□□□ -1.5
LINC02541-201ENST00000427157 HSPBP1Q9NZL4 362 aa5.69□□□□□ -1.5
LINC02541-201ENST00000427157 FTSJ1Q9UET6 329 aa5.69□□□□□ -1.5
LINC02541-201ENST00000427157 GRK2P25098 689 aa5.68□□□□□ -1.5
LINC02541-201ENST00000427157 GRK3P35626 688 aa5.68□□□□□ -1.5
LINC02541-201ENST00000427157 GRIN1Q05586 938 aa5.68□□□□□ -1.5
LINC02541-201ENST00000427157 HSP90AA2PQ14568 343 aaPredicted RBP5.68□□□□□ -1.5
LINC02541-201ENST00000427157 ICAM4Q14773 271 aa5.68□□□□□ -1.5
LINC02541-201ENST00000427157 NTRK3Q16288 839 aa5.68□□□□□ -1.5
LINC02541-201ENST00000427157 PHF19Q5T6S3 580 aa5.68□□□□□ -1.5
LINC02541-201ENST00000427157 KCNT2Q6UVM3 1135 aa5.68□□□□□ -1.5
LINC02541-201ENST00000427157 OTOP3Q7RTS5 596 aa5.68□□□□□ -1.5
LINC02541-201ENST00000427157 TRIM48Q8IWZ4 208 aa5.68□□□□□ -1.5
LINC02541-201ENST00000427157 RBM12BQ8IXT5 1001 aaKnown RBP5.68□□□□□ -1.5
LINC02541-201ENST00000427157 KBTBD2Q8IY47 623 aa5.68□□□□□ -1.5
LINC02541-201ENST00000427157 KLHL36Q8N4N3 616 aa5.68□□□□□ -1.5
LINC02541-201ENST00000427157 DTX3Q8N9I9 347 aa5.68□□□□□ -1.5
LINC02541-201ENST00000427157 CLEC4DQ8WXI8 215 aa5.68□□□□□ -1.5
LINC02541-201ENST00000427157 DVL3Q92997 716 aaPredicted RBP5.68□□□□□ -1.5
LINC02541-201ENST00000427157 SGSM3Q96HU1 749 aa5.68□□□□□ -1.5
LINC02541-201ENST00000427157 AARSD1Q9BTE6 412 aaKnown RBP5.68□□□□□ -1.5
LINC02541-201ENST00000427157 GPR42O15529 346 aa5.67□□□□□ -1.5
LINC02541-201ENST00000427157 KLF4O43474 513 aa5.67□□□□□ -1.5
LINC02541-201ENST00000427157 EPHB4P54760 987 aa5.67□□□□□ -1.5
LINC02541-201ENST00000427157 ZXDAP98168 799 aa5.67□□□□□ -1.5
LINC02541-201ENST00000427157 VASNQ6EMK4 673 aa5.67□□□□□ -1.5
LINC02541-201ENST00000427157 LBX2Q6XYB7 198 aa5.67□□□□□ -1.5
LINC02541-201ENST00000427157 DCAF4Q8WV16 495 aa5.67□□□□□ -1.5
LINC02541-201ENST00000427157 OSBP2Q969R2 916 aa5.67□□□□□ -1.5
LINC02541-201ENST00000427157 ZNF428Q96B54 188 aa5.67□□□□□ -1.5
LINC02541-201ENST00000427157 DLL4Q9NR61 685 aa5.67□□□□□ -1.5
LINC02541-201ENST00000427157 NPEPPSL1A6NEC2 478 aa5.66□□□□□ -1.5
LINC02541-201ENST00000427157 PRODHO43272 600 aa5.66□□□□□ -1.5
LINC02541-201ENST00000427157 LTFP02788 710 aa5.66□□□□□ -1.5
LINC02541-201ENST00000427157 FGFR1P11362 822 aa5.66□□□□□ -1.5
LINC02541-201ENST00000427157 COL6A2P12110 1019 aa5.66□□□□□ -1.5
LINC02541-201ENST00000427157 TUSC3Q13454 348 aa5.66□□□□□ -1.5
LINC02541-201ENST00000427157 CDSNQ15517 529 aa5.66□□□□□ -1.5
LINC02541-201ENST00000427157 KIZQ2M2Z5 673 aa5.66□□□□□ -1.5
LINC02541-201ENST00000427157 NUDT10Q8NFP7 164 aa5.66□□□□□ -1.5
LINC02541-201ENST00000427157 UHMK1Q8TAS1 419 aaKnown RBP5.66□□□□□ -1.5
LINC02541-201ENST00000427157 NUDT11Q96G61 164 aa5.66□□□□□ -1.5
LINC02541-201ENST00000427157 KCNJ15Q99712 375 aa5.66□□□□□ -1.5
LINC02541-201ENST00000427157 BARX1Q9HBU1 254 aaPredicted RBP5.66□□□□□ -1.5
LINC02541-201ENST00000427157 CD248Q9HCU0 757 aa5.66□□□□□ -1.5
LINC02541-201ENST00000427157 TELO2Q9Y4R8 837 aa5.66□□□□□ -1.5
LINC02541-201ENST00000427157 BLACEA4D250 179 aa5.65□□□□□ -1.5
LINC02541-201ENST00000427157 IQCA1LA6NCM1 817 aa5.65□□□□□ -1.5
LINC02541-201ENST00000427157 NKRFO15226 690 aaKnown RBP eCLIP5.65□□□□□ -1.5
LINC02541-201ENST00000427157 KLHL18O94889 574 aa5.65□□□□□ -1.5
LINC02541-201ENST00000427157 GNAT1P11488 350 aa5.65□□□□□ -1.5
LINC02541-201ENST00000427157 PABPC1P11940 636 aaKnown RBP5.65□□□□□ -1.5
LINC02541-201ENST00000427157 PPP2CBP62714 309 aa5.65□□□□□ -1.5
LINC02541-201ENST00000427157 PPP2CAP67775 309 aa5.65□□□□□ -1.5
LINC02541-201ENST00000427157 NFATC3Q12968 1075 aa5.65□□□□□ -1.5
LINC02541-201ENST00000427157 SKIDA1Q1XH10 827 aa5.65□□□□□ -1.5
LINC02541-201ENST00000427157 HABP4Q5JVS0 413 aaKnown RBP5.65□□□□□ -1.5
LINC02541-201ENST00000427157 YOD1Q5VVQ6 348 aaPredicted RBP5.65□□□□□ -1.5
LINC02541-201ENST00000427157 STYK1Q6J9G0 422 aa5.65□□□□□ -1.5
LINC02541-201ENST00000427157 ARHGEF18Q6ZSZ5 1173 aa5.65□□□□□ -1.5
LINC02541-201ENST00000427157 CIR1Q86X95 450 aaPredicted RBP5.65□□□□□ -1.5
LINC02541-201ENST00000427157 DNERQ8NFT8 737 aa5.65□□□□□ -1.5
LINC02541-201ENST00000427157 KISS1RQ969F8 398 aaPredicted RBP5.65□□□□□ -1.5
LINC02541-201ENST00000427157 GMLQ99445 158 aa5.65□□□□□ -1.5
LINC02541-201ENST00000427157 PTPN18Q99952 460 aa5.65□□□□□ -1.5
LINC02541-201ENST00000427157 ZFYVE21Q9BQ24 234 aa5.65□□□□□ -1.5
LINC02541-201ENST00000427157 MEGF9Q9H1U4 602 aa5.65□□□□□ -1.5
LINC02541-201ENST00000427157 ADAM29Q9UKF5 820 aa5.65□□□□□ -1.5
LINC02541-201ENST00000427157 AKAP8O43823 692 aaKnown RBP5.64□□□□□ -1.51
LINC02541-201ENST00000427157 B4GALT4O60513 344 aa5.64□□□□□ -1.51
LINC02541-201ENST00000427157 KNG1P01042 644 aa5.64□□□□□ -1.51
LINC02541-201ENST00000427157 CKMP06732 381 aa5.64□□□□□ -1.51
LINC02541-201ENST00000427157 FAHP16930 419 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms