RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 TMEM260Q9NX78 707 aa16.62■□□□□ 0.25
NCKIPSD-205ENST00000426678 HAS3O00219 553 aa16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 MAFGO15525 162 aa16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 LGALS2P05162 132 aa16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 SREBF1P36956 1147 aa16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 CLK2P49760 499 aaKnown RBP16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 SSRP1Q08945 709 aaKnown RBP16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 BFSP2Q13515 415 aa16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 ANKRD1Q15327 319 aa16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 GPR153Q6NV75 609 aa16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 CCDC155Q8N6L0 562 aa16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 BICD2Q8TD16 824 aa16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 GPR20Q99678 358 aa16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.61■□□□□ 0.259e-8■■■■■ 41.1
NCKIPSD-205ENST00000426678 MXRA8Q9BRK3 442 aa16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 WNT8AQ9H1J5 351 aa16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 BCAS3Q9H6U6 928 aa16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 IL23AQ9NPF7 189 aa16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 PKD2L1Q9P0L9 805 aa16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 HDAC6Q9UBN7 1215 aa16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 GTF2IRD1Q9UHL9 959 aa16.61■□□□□ 0.25
NCKIPSD-205ENST00000426678 CDKL5O76039 1030 aa16.6■□□□□ 0.25
NCKIPSD-205ENST00000426678 DEXIO95424 95 aa16.6■□□□□ 0.25
NCKIPSD-205ENST00000426678 ACRP10323 421 aa16.6■□□□□ 0.25
NCKIPSD-205ENST00000426678 KCNA2P16389 499 aa16.6■□□□□ 0.25
NCKIPSD-205ENST00000426678 ZNF76P36508 570 aa16.6■□□□□ 0.25
NCKIPSD-205ENST00000426678 ARHGAP4P98171 946 aa16.6■□□□□ 0.25
NCKIPSD-205ENST00000426678 GDF6Q6KF10 455 aaPredicted RBP16.6■□□□□ 0.25
NCKIPSD-205ENST00000426678 RETREG2Q8NC44 543 aa16.6■□□□□ 0.25
NCKIPSD-205ENST00000426678 C16orf70Q9BSU1 422 aa16.6■□□□□ 0.25
NCKIPSD-205ENST00000426678 SLKQ9H2G2 1235 aaPredicted RBP16.6■□□□□ 0.25
NCKIPSD-205ENST00000426678 VPS54Q9P1Q0 977 aa16.6■□□□□ 0.25
NCKIPSD-205ENST00000426678 ZNF215Q9UL58 517 aaPredicted RBP16.6■□□□□ 0.25
NCKIPSD-205ENST00000426678 TANC1Q9C0D5 1861 aa16.6■□□□□ 0.25
NCKIPSD-205ENST00000426678 H3BRB1 525 aa16.59■□□□□ 0.25
NCKIPSD-205ENST00000426678 PITPNM1O00562 1244 aa16.59■□□□□ 0.25
NCKIPSD-205ENST00000426678 ATP9AO75110 1047 aa16.59■□□□□ 0.25
NCKIPSD-205ENST00000426678 CEP55Q53EZ4 464 aa16.59■□□□□ 0.25
NCKIPSD-205ENST00000426678 TMEM240Q5SV17 173 aa16.59■□□□□ 0.25
NCKIPSD-205ENST00000426678 UTP14CQ5TAP6 766 aaKnown RBP16.59■□□□□ 0.25
NCKIPSD-205ENST00000426678 RPUSD2Q8IZ73 545 aaKnown RBP16.59■□□□□ 0.25
NCKIPSD-205ENST00000426678 CAGE1Q8TC20 777 aa16.59■□□□□ 0.25
NCKIPSD-205ENST00000426678 IL17RAQ96F46 866 aa16.59■□□□□ 0.25
NCKIPSD-205ENST00000426678 SCLYQ96I15 445 aa16.59■□□□□ 0.25
NCKIPSD-205ENST00000426678 MTIF3Q9H2K0 278 aaKnown RBP16.59■□□□□ 0.25
NCKIPSD-205ENST00000426678 TUT1Q9H6E5 874 aaKnown RBP16.59■□□□□ 0.25
NCKIPSD-205ENST00000426678 SH3GLB2Q9NR46 395 aa16.59■□□□□ 0.25
NCKIPSD-205ENST00000426678 KCNH7Q9NS40 1196 aa16.59■□□□□ 0.25
NCKIPSD-205ENST00000426678 SEC24BO95487 1268 aa16.58■□□□□ 0.24
NCKIPSD-205ENST00000426678 AK2P54819 239 aa16.58■□□□□ 0.24
NCKIPSD-205ENST00000426678 NLRP5P59047 1200 aa16.58■□□□□ 0.24
NCKIPSD-205ENST00000426678 ZNF365Q70YC5 407 aa16.58■□□□□ 0.24
NCKIPSD-205ENST00000426678 C16orf59Q7L2K0 433 aa16.58■□□□□ 0.24
NCKIPSD-205ENST00000426678 SDF4Q9BRK5 362 aa16.58■□□□□ 0.24
NCKIPSD-205ENST00000426678 JPH1Q9HDC5 661 aaPredicted RBP16.58■□□□□ 0.24
NCKIPSD-205ENST00000426678 TPCN1Q9ULQ1 816 aa16.58■□□□□ 0.24
NCKIPSD-205ENST00000426678 PFKFB2O60825 505 aa16.57■□□□□ 0.24
NCKIPSD-205ENST00000426678 FGBP02675 491 aa16.57■□□□□ 0.24
NCKIPSD-205ENST00000426678 PFKMP08237 780 aa16.57■□□□□ 0.24
NCKIPSD-205ENST00000426678 RFC2P35250 354 aa16.57■□□□□ 0.24
NCKIPSD-205ENST00000426678 TCF7P36402 384 aaPredicted RBP16.57■□□□□ 0.24
NCKIPSD-205ENST00000426678 SMAD3P84022 425 aaKnown RBP16.57■□□□□ 0.24
NCKIPSD-205ENST00000426678 SCRN1Q12765 414 aa16.57■□□□□ 0.24
NCKIPSD-205ENST00000426678 TRIM50Q86XT4 487 aa16.57■□□□□ 0.24
NCKIPSD-205ENST00000426678 CYP2W1Q8TAV3 490 aa16.57■□□□□ 0.24
NCKIPSD-205ENST00000426678 RASGRP4Q8TDF6 673 aa16.57■□□□□ 0.24
NCKIPSD-205ENST00000426678 AFAP1L1Q8TED9 768 aa16.57■□□□□ 0.24
NCKIPSD-205ENST00000426678 SEPT1Q8WYJ6 367 aa16.57■□□□□ 0.24
NCKIPSD-205ENST00000426678 SLC9A2Q9UBY0 812 aa16.57■□□□□ 0.24
NCKIPSD-205ENST00000426678 LAMA3Q16787 3333 aa16.57■□□□□ 0.24
NCKIPSD-205ENST00000426678 C17orf102A2RUQ5 167 aa16.56■□□□□ 0.24
NCKIPSD-205ENST00000426678 CYP3A4P08684 503 aa16.56■□□□□ 0.24
NCKIPSD-205ENST00000426678 SMIM10L2AP0DMW4 78 aa16.56■□□□□ 0.24
NCKIPSD-205ENST00000426678 SMIM10L2BP0DMW5 78 aa16.56■□□□□ 0.24
NCKIPSD-205ENST00000426678 NEK4P51957 841 aa16.56■□□□□ 0.24
NCKIPSD-205ENST00000426678 PTK7Q13308 1070 aa16.56■□□□□ 0.24
NCKIPSD-205ENST00000426678 NIPA1Q7RTP0 329 aa16.56■□□□□ 0.24
NCKIPSD-205ENST00000426678 PLA2G4DQ86XP0 818 aa16.56■□□□□ 0.24
NCKIPSD-205ENST00000426678 FAM177A1Q8N128 213 aaPredicted RBP16.56■□□□□ 0.24
NCKIPSD-205ENST00000426678 DEFB123Q8N688 67 aa16.56■□□□□ 0.24
NCKIPSD-205ENST00000426678 CTAGE1Q96RT6 745 aa16.56■□□□□ 0.24
NCKIPSD-205ENST00000426678 TELO2Q9Y4R8 837 aa16.56■□□□□ 0.24
NCKIPSD-205ENST00000426678 SCN5AQ14524 2016 aa16.56■□□□□ 0.24
NCKIPSD-205ENST00000426678 TRIP12Q14669 1992 aaPredicted RBP16.56■□□□□ 0.24
NCKIPSD-205ENST00000426678 NFASCO94856 1347 aa16.55■□□□□ 0.24
NCKIPSD-205ENST00000426678 STK36Q9NRP7 1315 aa16.55■□□□□ 0.24
NCKIPSD-205ENST00000426678 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.55■□□□□ 0.24
NCKIPSD-205ENST00000426678 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.55■□□□□ 0.24
NCKIPSD-205ENST00000426678 MEIS1O00470 390 aa16.55■□□□□ 0.24
NCKIPSD-205ENST00000426678 ADAMTS3O15072 1205 aa16.55■□□□□ 0.24
NCKIPSD-205ENST00000426678 IQCF3P0C7M6 154 aa16.55■□□□□ 0.24
NCKIPSD-205ENST00000426678 ARP10275 920 aa16.55■□□□□ 0.24
NCKIPSD-205ENST00000426678 SETQ01105 290 aaPredicted RBP16.55■□□□□ 0.24
NCKIPSD-205ENST00000426678 ZNF697Q5TEC3 545 aa16.55■□□□□ 0.24
NCKIPSD-205ENST00000426678 OTOP2Q7RTS6 562 aa16.55■□□□□ 0.24
NCKIPSD-205ENST00000426678 DEFB128Q7Z7B8 93 aa16.55■□□□□ 0.24
NCKIPSD-205ENST00000426678 HERVK_113Q902F9 699 aa16.55■□□□□ 0.24
NCKIPSD-205ENST00000426678 DHX38Q92620 1227 aaKnown RBP16.55■□□□□ 0.24
NCKIPSD-205ENST00000426678 GLG1Q92896 1179 aa16.55■□□□□ 0.24
NCKIPSD-205ENST00000426678 ATP6V0A1Q93050 837 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms