RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 KIF9Q9HAQ2 790 aa8.62□□□□□ -1.03
CTNND1-207ENST00000426142 TACC3Q9Y6A5 838 aa8.62□□□□□ -1.03
CTNND1-207ENST00000426142 ABCB11O95342 1321 aa8.62□□□□□ -1.03
CTNND1-207ENST00000426142 ALKQ9UM73 1620 aa8.62□□□□□ -1.03
CTNND1-207ENST00000426142 XPOTO43592 962 aaKnown RBP8.62□□□□□ -1.03
CTNND1-207ENST00000426142 GTF2A1P52655 376 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-207ENST00000426142 SLC17A8Q8NDX2 589 aa8.62□□□□□ -1.03
CTNND1-207ENST00000426142 CDHR1Q96JP9 859 aa8.62□□□□□ -1.03
CTNND1-207ENST00000426142 PPP1R13BQ96KQ4 1090 aa8.62□□□□□ -1.03
CTNND1-207ENST00000426142 TMEM47Q9BQJ4 181 aa8.62□□□□□ -1.03
CTNND1-207ENST00000426142 JPH2Q9BR39 696 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-207ENST00000426142 SRPRBQ9Y5M8 271 aaKnown RBP8.62□□□□□ -1.03
CTNND1-207ENST00000426142 TNS3Q68CZ2 1445 aa8.62□□□□□ -1.03
CTNND1-207ENST00000426142 USP17L15C9J2P7 530 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 USP17L10C9JJH3 530 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 USP17L13C9JLJ4 530 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 USP17L11C9JVI0 530 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 USP17L18D6R9N7 530 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 USP17L22D6RA61 530 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 USP17L17D6RBQ6 530 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 USP17L19D6RCP7 530 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 USP17L20D6RJB6 530 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 ZWINTO95229 277 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 CXCR5P32302 372 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 GUCY2DQ02846 1103 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 USP17L24Q0WX57 530 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 RESTQ13127 1097 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 USP17L6PQ6QN14 398 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 SLC35F6Q8N357 371 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 RYBPQ8N488 228 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-207ENST00000426142 STAG1Q8WVM7 1258 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 CABS1Q96KC9 395 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 BHMT2Q9H2M3 363 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 PRKAG2Q9UGJ0 569 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 PCDHA6Q9UN73 950 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 PCDHA8Q9Y5H6 950 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 CDC42BPAQ5VT25 1732 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 LIFRP42702 1097 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 PEX3P56589 373 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 PPFIA1Q13136 1202 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 MAN2A1Q16706 1144 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 MIS12Q9H081 205 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 TMEM206Q9H813 350 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 TMEM260Q9NX78 707 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 STK17AQ9UEE5 414 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 PTCH1Q13635 1447 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 POTEMA6NI47 508 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 ASNSP08243 561 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 YWHAGP61981 247 aaKnown RBP eCLIP8.61□□□□□ -1.03
CTNND1-207ENST00000426142 KIAA1841Q6NSI8 718 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 DCLK2Q8N568 766 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 ACRBPQ8NEB7 543 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 SMYD2Q9NRG4 433 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 NCAPD2Q15021 1401 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 SOWAHDA6NJG2 315 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 ZMYND10O75800 440 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 MOCS3O95396 460 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 EEF1GP26641 437 aaKnown RBP8.61□□□□□ -1.03
CTNND1-207ENST00000426142 CASP1P29466 404 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 KIF11P52732 1056 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 BPIFB4P59827 614 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 ADCY1Q08828 1119 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 TTC19Q6DKK2 380 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-207ENST00000426142 CROCCP2Q86T23 111 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 CCNYQ8ND76 341 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 CACTINQ8WUQ7 758 aaKnown RBP8.61□□□□□ -1.03
CTNND1-207ENST00000426142 BCL2L12Q9HB09 334 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 RNF181Q9P0P0 153 aa8.61□□□□□ -1.03
CTNND1-207ENST00000426142 FTCDO95954 541 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 CHRNA5P30532 468 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 FKBP3Q00688 224 aaKnown RBP8.6□□□□□ -1.03
CTNND1-207ENST00000426142 TOB2Q14106 344 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-207ENST00000426142 TMTC3Q6ZXV5 915 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 PNMA8AQ86V59 439 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-207ENST00000426142 CEP95Q96GE4 821 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 MSTO1Q9BUK6 570 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 SLC38A10Q9HBR0 1119 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 FNDC3AQ9Y2H6 1198 aaKnown RBP8.6□□□□□ -1.03
CTNND1-207ENST00000426142 PSDA5PKW4 1024 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-207ENST00000426142 POC1B-GALNT4F8VUJ3 575 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 NOL3O60936 208 aaKnown RBP8.6□□□□□ -1.03
CTNND1-207ENST00000426142 PTPREP23469 700 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 SNRNP48Q6IEG0 339 aaKnown RBP8.6□□□□□ -1.03
CTNND1-207ENST00000426142 OXER1Q8TDS5 423 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 HEXIM2Q96MH2 286 aaKnown RBP8.6□□□□□ -1.03
CTNND1-207ENST00000426142 SPTLC3Q9NUV7 552 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 ARHGAP31Q2M1Z3 1444 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 TCP1P17987 556 aaKnown RBP8.6□□□□□ -1.03
CTNND1-207ENST00000426142 MTMR1Q13613 665 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 ARHGEF6Q15052 776 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 ANKRD20A3Q5VUR7 823 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 OR6B2Q6IFH4 312 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.6□□□□□ -1.03
CTNND1-207ENST00000426142 DCAF4Q8WV16 495 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 ZNF668Q96K58 619 aaPredicted RBP8.6□□□□□ -1.03
CTNND1-207ENST00000426142 RPGRIP1Q96KN7 1286 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 RMDN3Q96TC7 470 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 RWDD2AQ9UIY3 292 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 ZBTB5O15062 677 aa8.6□□□□□ -1.03
CTNND1-207ENST00000426142 INPP5BP32019 993 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms