RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 TRAF7Q6Q0C0 670 aa21.3■■□□□ 1
SREBF1-206ENST00000423161 CYFIP1Q7L576 1253 aa21.3■■□□□ 1
SREBF1-206ENST00000423161 SERINC5Q86VE9 423 aa21.3■■□□□ 1
SREBF1-206ENST00000423161 SRBD1Q8N5C6 995 aaKnown RBP21.3■■□□□ 1
SREBF1-206ENST00000423161 TUT1Q9H6E5 874 aaKnown RBP21.3■■□□□ 1
SREBF1-206ENST00000423161 ANO2Q9NQ90 1003 aa21.3■■□□□ 1
SREBF1-206ENST00000423161 SPTBN5Q9NRC6 3674 aaKnown RBP21.3■■□□□ 1
SREBF1-206ENST00000423161 SIP14410 1827 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 ABHD14A-ACY1A0A1B0GW23 586 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 EPOPA6NHQ4 379 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 PIK3CDO00329 1044 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 MEIS2O14770 477 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 SMIM10L2AP0DMW4 78 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 SMIM10L2BP0DMW5 78 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 CALM1P0DP23 149 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 CALM2P0DP24 149 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 CALM3P0DP25 149 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 NECTIN1Q15223 517 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 PCNX4Q63HM2 1172 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 METTL7BQ6UX53 244 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 TMCO2Q7Z6W1 182 aaPredicted RBP21.29■■□□□ 1
SREBF1-206ENST00000423161 RAB11FIP4Q86YS3 637 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 CMTR1Q8N1G2 835 aaKnown RBP21.29■■□□□ 1
SREBF1-206ENST00000423161 ARNTL2Q8WYA1 636 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 ATP6V0A1Q93050 837 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 ASB2Q96Q27 587 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 ZBED2Q9BTP6 218 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 USP26Q9BXU7 913 aa21.29■■□□□ 1
SREBF1-206ENST00000423161 TCF20Q9UGU0 1960 aaKnown RBP21.28■■□□□ 1
SREBF1-206ENST00000423161 GTPBP6O43824 516 aaPredicted RBP21.28■■□□□ 1
SREBF1-206ENST00000423161 EFCAB14O75071 495 aa21.28■■□□□ 1
SREBF1-206ENST00000423161 HOXC8P31273 242 aa21.28■■□□□ 1
SREBF1-206ENST00000423161 THPOP40225 353 aa21.28■■□□□ 1
SREBF1-206ENST00000423161 MRPS5P82675 430 aaKnown RBP21.28■■□□□ 1
SREBF1-206ENST00000423161 IKBKEQ14164 716 aa21.28■■□□□ 1
SREBF1-206ENST00000423161 MBTPS1Q14703 1052 aa21.28■■□□□ 1
SREBF1-206ENST00000423161 XRRA1Q6P2D8 792 aa21.28■■□□□ 1
SREBF1-206ENST00000423161 GPR20Q99678 358 aa21.28■■□□□ 1
SREBF1-206ENST00000423161 LRRC2Q9BYS8 371 aa21.28■■□□□ 1
SREBF1-206ENST00000423161 TSPYL2Q9H2G4 693 aaPredicted RBP21.28■■□□□ 1
SREBF1-206ENST00000423161 SLC12A7Q9Y666 1083 aa21.28■■□□□ 1
SREBF1-206ENST00000423161 MTCH2Q9Y6C9 303 aa21.28■■□□□ 1
SREBF1-206ENST00000423161 EMSYQ7Z589 1322 aa21.28■■□□□ 1
SREBF1-206ENST00000423161 NCOR1O75376 2440 aa21.27■■□□□ 1
SREBF1-206ENST00000423161 RBAK-RBAKDNI3L0D1 243 aa21.27■■□□□ 1
SREBF1-206ENST00000423161 POU3F3P20264 500 aaPredicted RBP21.27■■□□□ 1
SREBF1-206ENST00000423161 hCG_1642624A0A1W2PR95 340 aa21.26■□□□□ 0.99
SREBF1-206ENST00000423161 LCHNA4D1U4 455 aa21.26■□□□□ 0.99
SREBF1-206ENST00000423161 RSPH10B2B2RC85 870 aa21.26■□□□□ 0.99
SREBF1-206ENST00000423161 TREHO43280 583 aa21.26■□□□□ 0.99
SREBF1-206ENST00000423161 LGR5O75473 907 aa21.26■□□□□ 0.99
SREBF1-206ENST00000423161 RSPH10BP0C881 870 aa21.26■□□□□ 0.99
SREBF1-206ENST00000423161 SP4Q02446 784 aa21.26■□□□□ 0.99
SREBF1-206ENST00000423161 SPRED2Q7Z698 418 aa21.26■□□□□ 0.99
SREBF1-206ENST00000423161 NLRX1Q86UT6 975 aa21.26■□□□□ 0.99
SREBF1-206ENST00000423161 TRIM50Q86XT4 487 aa21.26■□□□□ 0.99
SREBF1-206ENST00000423161 CCDC82Q8N4S0 544 aa21.26■□□□□ 0.99
SREBF1-206ENST00000423161 SENP7Q9BQF6 1050 aa21.26■□□□□ 0.99
SREBF1-206ENST00000423161 RNPEPQ9H4A4 650 aa21.26■□□□□ 0.99
SREBF1-206ENST00000423161 PSTPIP2Q9H939 334 aa21.26■□□□□ 0.99
SREBF1-206ENST00000423161 ZNF215Q9UL58 517 aaPredicted RBP21.26■□□□□ 0.99
SREBF1-206ENST00000423161 GJB5O95377 273 aa21.25■□□□□ 0.99
SREBF1-206ENST00000423161 SKIV2LQ15477 1246 aaKnown RBP21.25■□□□□ 0.99
SREBF1-206ENST00000423161 BMP2KLQ5H9B9 411 aa21.25■□□□□ 0.99
SREBF1-206ENST00000423161 UTP14CQ5TAP6 766 aaKnown RBP21.25■□□□□ 0.99
SREBF1-206ENST00000423161 TMTC3Q6ZXV5 915 aa21.25■□□□□ 0.99
SREBF1-206ENST00000423161 MICU3Q86XE3 530 aa21.25■□□□□ 0.99
SREBF1-206ENST00000423161 IL27Q8NEV9 243 aa21.25■□□□□ 0.99
SREBF1-206ENST00000423161 TELO2Q9Y4R8 837 aa21.25■□□□□ 0.99
SREBF1-206ENST00000423161 UBE2SQ16763 222 aa21.24■□□□□ 0.99
SREBF1-206ENST00000423161 RNF20Q5VTR2 975 aa21.24■□□□□ 0.99
SREBF1-206ENST00000423161 KRT40Q6A162 431 aa21.24■□□□□ 0.99
SREBF1-206ENST00000423161 SGMS1Q86VZ5 419 aa21.24■□□□□ 0.99
SREBF1-206ENST00000423161 SKAP1Q86WV1 359 aa21.24■□□□□ 0.99
SREBF1-206ENST00000423161 FANCBQ8NB91 859 aa21.24■□□□□ 0.99
SREBF1-206ENST00000423161 GIMAP8Q8ND71 665 aaPredicted RBP21.24■□□□□ 0.99
SREBF1-206ENST00000423161 DBF4BQ8NFT6 615 aa21.24■□□□□ 0.99
SREBF1-206ENST00000423161 GPRASP2Q96D09 838 aa21.24■□□□□ 0.99
SREBF1-206ENST00000423161 RAD9AQ99638 391 aa21.24■□□□□ 0.99
SREBF1-206ENST00000423161 SETD4Q9NVD3 440 aa21.24■□□□□ 0.99
SREBF1-206ENST00000423161 TNFRSF10AO00220 468 aa21.23■□□□□ 0.99
SREBF1-206ENST00000423161 GNAT1P11488 350 aa21.23■□□□□ 0.99
SREBF1-206ENST00000423161 GRB10Q13322 594 aa21.23■□□□□ 0.99
SREBF1-206ENST00000423161 FAM117BQ6P1L5 589 aa21.23■□□□□ 0.99
SREBF1-206ENST00000423161 ADAMTS19Q8TE59 1207 aa21.23■□□□□ 0.99
SREBF1-206ENST00000423161 NLRC5Q86WI3 1866 aa21.22■□□□□ 0.99
SREBF1-206ENST00000423161 SPDYE3A6NKU9 549 aa21.22■□□□□ 0.99
SREBF1-206ENST00000423161 CAND2O75155 1236 aa21.22■□□□□ 0.99
SREBF1-206ENST00000423161 CTSHP09668 335 aa21.22■□□□□ 0.99
SREBF1-206ENST00000423161 PLEKHG4Q58EX7 1191 aa21.22■□□□□ 0.99
SREBF1-206ENST00000423161 SYNE3Q6ZMZ3 975 aa21.22■□□□□ 0.99
SREBF1-206ENST00000423161 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.22■□□□□ 0.998e-11■■■■■ 32.9
SREBF1-206ENST00000423161 HEATR3Q7Z4Q2 680 aa21.22■□□□□ 0.99
SREBF1-206ENST00000423161 CDHR1Q96JP9 859 aa21.22■□□□□ 0.99
SREBF1-206ENST00000423161 AMHP03971 560 aa21.21■□□□□ 0.99
SREBF1-206ENST00000423161 KCNA2P16389 499 aa21.21■□□□□ 0.99
SREBF1-206ENST00000423161 ITGB5P18084 799 aa21.21■□□□□ 0.99
SREBF1-206ENST00000423161 TCF7P36402 384 aaPredicted RBP21.21■□□□□ 0.99
SREBF1-206ENST00000423161 ARHGAP4P98171 946 aa21.21■□□□□ 0.99
SREBF1-206ENST00000423161 TFF2Q03403 129 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms