RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 GIMAP6Q6P9H5 292 aa6.7□□□□□ -1.34
HMGB1P49-201ENST00000418882 STK32CQ86UX6 486 aa6.7□□□□□ -1.34
HMGB1P49-201ENST00000418882 GORASP1Q9BQQ3 440 aa6.7□□□□□ -1.34
HMGB1P49-201ENST00000418882 FANCLQ9NW38 375 aa6.7□□□□□ -1.34
HMGB1P49-201ENST00000418882 TBX22Q9Y458 520 aa6.7□□□□□ -1.34
HMGB1P49-201ENST00000418882 CCDC66A2RUB6 948 aa6.69□□□□□ -1.34
HMGB1P49-201ENST00000418882 KCNK3O14649 394 aa6.69□□□□□ -1.34
HMGB1P49-201ENST00000418882 EFCAB14O75071 495 aa6.69□□□□□ -1.34
HMGB1P49-201ENST00000418882 DNAJC8O75937 253 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P49-201ENST00000418882 LRG1P02750 347 aa6.69□□□□□ -1.34
HMGB1P49-201ENST00000418882 THBS2P35442 1172 aa6.69□□□□□ -1.34
HMGB1P49-201ENST00000418882 JAM2P57087 298 aa6.69□□□□□ -1.34
HMGB1P49-201ENST00000418882 RBM10P98175 930 aaKnown RBP6.69□□□□□ -1.34
HMGB1P49-201ENST00000418882 GRIN1Q05586 938 aa6.69□□□□□ -1.34
HMGB1P49-201ENST00000418882 TUSC3Q13454 348 aa6.69□□□□□ -1.34
HMGB1P49-201ENST00000418882 ZNF460Q14592 562 aa6.69□□□□□ -1.34
HMGB1P49-201ENST00000418882 VWA3BQ502W6 1294 aa6.69□□□□□ -1.34
HMGB1P49-201ENST00000418882 ADGRG2Q8IZP9 1017 aa6.69□□□□□ -1.34
HMGB1P49-201ENST00000418882 FNIP1Q8TF40 1166 aa6.69□□□□□ -1.34
HMGB1P49-201ENST00000418882 FBXW5Q969U6 566 aa6.69□□□□□ -1.34
HMGB1P49-201ENST00000418882 PWWP2AQ96N64 755 aa6.69□□□□□ -1.34
HMGB1P49-201ENST00000418882 SMURF1Q9HCE7 757 aa6.69□□□□□ -1.34
HMGB1P49-201ENST00000418882 CD2APQ9Y5K6 639 aa6.69□□□□□ -1.34
HMGB1P49-201ENST00000418882 ZNF561-AS1K7EIQ3 104 aa6.68□□□□□ -1.34
HMGB1P49-201ENST00000418882 MAN2B1O00754 1011 aa6.68□□□□□ -1.34
HMGB1P49-201ENST00000418882 FFAR3O14843 346 aa6.68□□□□□ -1.34
HMGB1P49-201ENST00000418882 PDE6AP16499 860 aa6.68□□□□□ -1.34
HMGB1P49-201ENST00000418882 SPIRE1Q08AE8 756 aa6.68□□□□□ -1.34
HMGB1P49-201ENST00000418882 CYP4F22Q6NT55 531 aa6.68□□□□□ -1.34
HMGB1P49-201ENST00000418882 TEPPQ6URK8 271 aa6.68□□□□□ -1.34
HMGB1P49-201ENST00000418882 CD300LDQ6UXZ3 194 aa6.68□□□□□ -1.34
HMGB1P49-201ENST00000418882 OSTM1Q86WC4 334 aa6.68□□□□□ -1.34
HMGB1P49-201ENST00000418882 PROSER1Q86XN7 944 aa6.68□□□□□ -1.34
HMGB1P49-201ENST00000418882 KRTAP1-3Q8IUG1 177 aa6.68□□□□□ -1.34
HMGB1P49-201ENST00000418882 ZC3H7AQ8IWR0 971 aaKnown RBP6.68□□□□□ -1.34
HMGB1P49-201ENST00000418882 CISD2Q8N5K1 135 aaKnown RBP6.68□□□□□ -1.34
HMGB1P49-201ENST00000418882 TP53I13Q8NBR0 393 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P49-201ENST00000418882 TOX2Q96NM4 488 aa6.68□□□□□ -1.34
HMGB1P49-201ENST00000418882 DTLQ9NZJ0 730 aa6.68□□□□□ -1.34
HMGB1P49-201ENST00000418882 DSEQ9UL01 958 aa6.68□□□□□ -1.34
HMGB1P49-201ENST00000418882 A0A1B0GTL3 188 aa6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 ACOT7O00154 380 aa6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 KRIT1O00522 736 aa6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 CYP2C8P10632 490 aa6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 RANGAP1P46060 587 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 DNM2P50570 870 aa6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 AFF3P51826 1226 aaKnown RBP6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 ITGA1P56199 1179 aa6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 PABPC4Q13310 644 aaKnown RBP eCLIP6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 SMAD4Q13485 552 aaKnown RBP6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 RTP5Q14D33 572 aa6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 FNDC3BQ53EP0 1204 aaKnown RBP6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 TM4SF20Q53R12 229 aa6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 ZNF385BQ569K4 471 aa6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 CIAPIN1Q6FI81 312 aa6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 ARHGAP36Q6ZRI8 547 aa6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 C16orf59Q7L2K0 433 aa6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 PTRH1Q86Y79 214 aaKnown RBP6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 PHOSPHO1Q8TCT1 267 aa6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 ZNF526Q8TF50 670 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 MAGEB10Q96LZ2 347 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 CATSPERZQ9NTU4 200 aa6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 SPATA6Q9NWH7 488 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 SRPK3Q9UPE1 567 aa6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 FAN1Q9Y2M0 1017 aa6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 PMF1-BGLAPU3KQ54 211 aa6.67□□□□□ -1.34
HMGB1P49-201ENST00000418882 FAM83GA6ND36 823 aa6.66□□□□□ -1.34
HMGB1P49-201ENST00000418882 RFXAPO00287 272 aa6.66□□□□□ -1.34
HMGB1P49-201ENST00000418882 KRT15P19012 456 aa6.66□□□□□ -1.34
HMGB1P49-201ENST00000418882 EPHA5P54756 1037 aa6.66□□□□□ -1.34
HMGB1P49-201ENST00000418882 ADAM9Q13443 819 aa6.66□□□□□ -1.34
HMGB1P49-201ENST00000418882 SEC23AQ15436 765 aa6.66□□□□□ -1.34
HMGB1P49-201ENST00000418882 SPOCD1Q6ZMY3 1216 aa6.66□□□□□ -1.34
HMGB1P49-201ENST00000418882 KCTD1Q719H9 257 aa6.66□□□□□ -1.34
HMGB1P49-201ENST00000418882 TTLL11Q8NHH1 800 aa6.66□□□□□ -1.34
HMGB1P49-201ENST00000418882 TOE1Q96GM8 510 aaKnown RBP6.66□□□□□ -1.34
HMGB1P49-201ENST00000418882 TNPO3Q9Y5L0 923 aaKnown RBP6.66□□□□□ -1.34
HMGB1P49-201ENST00000418882 FAM90A27PA6NNH2 459 aa6.65□□□□□ -1.34
HMGB1P49-201ENST00000418882 ZSCAN22P10073 491 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P49-201ENST00000418882 GPR19Q15760 415 aa6.65□□□□□ -1.34
HMGB1P49-201ENST00000418882 LIPIQ6XZB0 460 aa6.65□□□□□ -1.34
HMGB1P49-201ENST00000418882 OVCH1Q7RTY7 1134 aa6.65□□□□□ -1.34
HMGB1P49-201ENST00000418882 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P49-201ENST00000418882 NOP9Q86U38 636 aaKnown RBP6.65□□□□□ -1.34
HMGB1P49-201ENST00000418882 SAPCD2Q86UD0 394 aa6.65□□□□□ -1.34
HMGB1P49-201ENST00000418882 HOMER1Q86YM7 354 aa6.65□□□□□ -1.34
HMGB1P49-201ENST00000418882 LINC00482Q8N8I6 264 aa6.65□□□□□ -1.34
HMGB1P49-201ENST00000418882 IGSF22Q8N9C0 903 aa6.65□□□□□ -1.34
HMGB1P49-201ENST00000418882 APPBP2Q92624 585 aa6.65□□□□□ -1.34
HMGB1P49-201ENST00000418882 ZBTB8AQ96BR9 441 aa6.65□□□□□ -1.34
HMGB1P49-201ENST00000418882 C11orf84Q9BUA3 381 aaPredicted RBP6.65□□□□□ -1.34
HMGB1P49-201ENST00000418882 CELF4Q9BZC1 486 aaKnown RBP6.65□□□□□ -1.34
HMGB1P49-201ENST00000418882 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P49-201ENST00000418882 TRIM13O60858 407 aa6.64□□□□□ -1.35
HMGB1P49-201ENST00000418882 CDC45O75419 566 aa6.64□□□□□ -1.35
HMGB1P49-201ENST00000418882 GLRX3O76003 335 aaKnown RBP6.64□□□□□ -1.35
HMGB1P49-201ENST00000418882 NAT1P18440 290 aa6.64□□□□□ -1.35
HMGB1P49-201ENST00000418882 LACTBP83111 547 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P49-201ENST00000418882 PAN2Q504Q3 1202 aaKnown RBP6.64□□□□□ -1.35
HMGB1P49-201ENST00000418882 PHF19Q5T6S3 580 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms