RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 GUCY2DQ02846 1103 aa13.13□□□□□ -0.31
LIMK1-202ENST00000418310 KIAA0753Q2KHM9 967 aa13.13□□□□□ -0.31
LIMK1-202ENST00000418310 PRR16Q569H4 304 aa13.13□□□□□ -0.31
LIMK1-202ENST00000418310 MUM1L1Q5H9M0 696 aa13.13□□□□□ -0.31
LIMK1-202ENST00000418310 SFMBT2Q5VUG0 894 aa13.13□□□□□ -0.31
LIMK1-202ENST00000418310 CCDC84Q86UT8 332 aaPredicted RBP13.13□□□□□ -0.31
LIMK1-202ENST00000418310 STK17AQ9UEE5 414 aa13.13□□□□□ -0.31
LIMK1-202ENST00000418310 BCS1LQ9Y276 419 aa13.13□□□□□ -0.31
LIMK1-202ENST00000418310 CCDC88AQ3V6T2 1871 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 ANO9A1A5B4 782 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 KRT14P02533 472 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 TUBB4BP68371 445 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 IQCEQ6IPM2 695 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 FAM76AQ8TAV0 307 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 CUL5Q93034 780 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 NOX5Q96PH1 765 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 KRT12Q99456 494 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 TLR10Q9BXR5 811 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 KCNQ5Q9NR82 932 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 SERPINB13Q9UIV8 391 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 LAMB1P07942 1786 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 DLEC1Q9Y238 1755 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 A0A087X0T9 212 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 PLA2G4BP0C869 781 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 FAM228BP0C875 321 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 PLCG2P16885 1265 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 CARSP49589 748 aaKnown RBP13.12□□□□□ -0.31
LIMK1-202ENST00000418310 PSMC6P62333 389 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 FKBP3Q00688 224 aaKnown RBP13.12□□□□□ -0.31
LIMK1-202ENST00000418310 KLHL30Q0D2K2 578 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 SLC9C1Q4G0N8 1177 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 ARL8AQ96BM9 186 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 EPB41L5Q9HCM4 733 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 SAMM50Q9Y512 469 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 CLIC2O15247 247 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 GDF11O95390 407 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 FGFR1OPO95684 399 aaKnown RBP13.12□□□□□ -0.31
LIMK1-202ENST00000418310 TTLL1O95922 423 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 FAM153BP0C7A2 387 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 CCT5P48643 541 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 ZNF543Q08ER8 600 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 ADAM9Q13443 819 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 FAM153CQ494X1 144 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 HAUS3Q68CZ6 603 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 KIAA0825Q8IV33 1275 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 DNAJC19Q96DA6 116 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 PURBQ96QR8 312 aaKnown RBP13.12□□□□□ -0.31
LIMK1-202ENST00000418310 PSD3Q9NYI0 1048 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 FAM153AQ9UHL3 310 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 FAM184BQ9ULE4 1060 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 PCDHA1Q9Y5I3 950 aa13.12□□□□□ -0.31
LIMK1-202ENST00000418310 PVALEFA0A1B0GWK0 134 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 TULP2O00295 520 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 PRPF6O94906 941 aaKnown RBP13.11□□□□□ -0.31
LIMK1-202ENST00000418310 MCM3P25205 808 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 HOXA13P31271 388 aaPredicted RBP13.11□□□□□ -0.31
LIMK1-202ENST00000418310 FXR2P51116 673 aaKnown RBP eCLIP13.11□□□□□ -0.31
LIMK1-202ENST00000418310 KLHDC7AQ5VTJ3 777 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 CERS5Q8N5B7 392 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 RASSF4Q9H2L5 321 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 LAMB2P55268 1798 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 TNRC6CQ9HCJ0 1690 aaKnown RBP13.11□□□□□ -0.31
LIMK1-202ENST00000418310 A0A1W2PQJ5 194 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 TMCO5BA8MYB1 307 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 CHMP2AO43633 222 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 ZEB2O60315 1214 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 MED24O75448 989 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 HEXIM1O94992 359 aaKnown RBP13.11□□□□□ -0.31
LIMK1-202ENST00000418310 TUBBP07437 444 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 GLI1P08151 1106 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 SLC9A1P19634 815 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 ATP2B4P23634 1241 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 UBXN2AP68543 259 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 LRRC63Q05C16 580 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 RC3H1Q5TC82 1133 aaKnown RBP13.11□□□□□ -0.31
LIMK1-202ENST00000418310 GJB7Q6PEY0 223 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 SPICE1Q8N0Z3 855 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 FNBP4Q8N3X1 1017 aaPredicted RBP13.11□□□□□ -0.31
LIMK1-202ENST00000418310 SPAG5Q96R06 1193 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 FAM107BQ9H098 131 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 DBNDD1Q9H9R9 158 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.11□□□□□ -0.31
LIMK1-202ENST00000418310 ZC3H4Q9UPT8 1303 aaKnown RBP13.11□□□□□ -0.31
LIMK1-202ENST00000418310 COL22A1Q8NFW1 1626 aaPredicted RBP13.11□□□□□ -0.31
LIMK1-202ENST00000418310 PNMA6FA0A0J9YX94 578 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 RSPH10B2B2RC85 870 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 RSPH10BP0C881 870 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 NR2F2P24468 414 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 HLTFQ14527 1009 aaKnown RBP eCLIP13.11□□□□□ -0.31
LIMK1-202ENST00000418310 QRICH1Q2TAL8 776 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 ASPRV1Q53RT3 343 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 HGSNATQ68CP4 663 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 RPGRIP1Q96KN7 1286 aa13.11□□□□□ -0.31
LIMK1-202ENST00000418310 NOL4O94818 638 aa13.1□□□□□ -0.31
LIMK1-202ENST00000418310 MRPL12P52815 198 aaKnown RBP13.1□□□□□ -0.31
LIMK1-202ENST00000418310 KSR1Q8IVT5 923 aa13.1□□□□□ -0.31
LIMK1-202ENST00000418310 CCDC43Q96MW1 224 aaKnown RBP13.1□□□□□ -0.31
LIMK1-202ENST00000418310 EMILIN3Q9NT22 766 aa13.1□□□□□ -0.31
LIMK1-202ENST00000418310 STIM2Q9P246 746 aa13.1□□□□□ -0.31
LIMK1-202ENST00000418310 USP21Q9UK80 565 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms