RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 RRAGAQ7L523 313 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 TMC3Q7Z5M5 1100 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 BAP1Q92560 729 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 ANKRD27Q96NW4 1050 aa8.8□□□□□ -1
HMGXB4-202ENST00000418170 MYH4Q9Y623 1939 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 SEPT2Q15019 361 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 FAM133BQ5BKY9 247 aaKnown RBP8.79□□□□□ -1
HMGXB4-202ENST00000418170 CWF19L1Q69YN2 538 aaKnown RBP8.79□□□□□ -1
HMGXB4-202ENST00000418170 DDX42Q86XP3 938 aaKnown RBP eCLIP8.79□□□□□ -1
HMGXB4-202ENST00000418170 STAG2Q8N3U4 1231 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 F8VZ95 297 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 MMEP08473 750 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 ATP4AP20648 1035 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 MCM7P33993 719 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 FLT3P36888 993 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 PAPOLAP51003 745 aaKnown RBP8.79□□□□□ -1
HMGXB4-202ENST00000418170 RNASE9P60153 205 aaKnown RBP8.79□□□□□ -1
HMGXB4-202ENST00000418170 NCALDP61601 193 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 TMC4Q7Z404 712 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 CCDC84Q86UT8 332 aaPredicted RBP8.79□□□□□ -1
HMGXB4-202ENST00000418170 SCFD2Q8WU76 684 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 ATXN2LQ8WWM7 1075 aaKnown RBP8.79□□□□□ -1
HMGXB4-202ENST00000418170 NUCKS1Q9H1E3 243 aaKnown RBP8.79□□□□□ -1
HMGXB4-202ENST00000418170 KBTBD4Q9NVX7 518 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 SAMD15Q9P1V8 674 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 BCORQ6W2J9 1755 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 GOLGA6L10A0A0M3HER8 536 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 hCG_1642624A0A1W2PR95 340 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 PDE6BP35913 854 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 EHHADHQ08426 723 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 VWA3BQ502W6 1294 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 ZC3H12AQ5D1E8 599 aaKnown RBP8.79□□□□□ -1
HMGXB4-202ENST00000418170 HGSNATQ68CP4 663 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 ERICH1Q86X53 443 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 NBPF5PQ86XG9 351 aaPredicted RBP8.79□□□□□ -1
HMGXB4-202ENST00000418170 TTC5Q8N0Z6 440 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 TEX9Q8N6V9 391 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 DRAXINQ8NBI3 349 aaPredicted RBP8.79□□□□□ -1
HMGXB4-202ENST00000418170 PAPOLBQ9NRJ5 636 aaKnown RBP8.79□□□□□ -1
HMGXB4-202ENST00000418170 RTL9Q8NET4 1388 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 RIC1Q4ADV7 1423 aa8.79□□□□□ -1
HMGXB4-202ENST00000418170 STXBP3O00186 592 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 RARAP10276 462 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 CHN1P15882 459 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 ATP2A2P16615 1042 aaKnown RBP8.78□□□□□ -1
HMGXB4-202ENST00000418170 ZNF131P52739 623 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 EIF3BP55884 814 aaKnown RBP8.78□□□□□ -1
HMGXB4-202ENST00000418170 ROR2Q01974 943 aaKnown RBP8.78□□□□□ -1
HMGXB4-202ENST00000418170 OSBPL1AQ9BXW6 950 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 ABCF3Q9NUQ8 709 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 IRAK4Q9NWZ3 460 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 PACSIN2Q9UNF0 486 aaPredicted RBP8.78□□□□□ -1
HMGXB4-202ENST00000418170 V9GY48 417 aaPredicted RBP8.78□□□□□ -1
HMGXB4-202ENST00000418170 PCCAP05165 728 aaPredicted RBP8.78□□□□□ -1
HMGXB4-202ENST00000418170 PDXDC1Q6P996 788 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 SPICE1Q8N0Z3 855 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 TSC22D3Q99576 134 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 MMRN2Q9H8L6 949 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 LUC7LQ9NQ29 371 aaKnown RBP8.78□□□□□ -1
HMGXB4-202ENST00000418170 PNMA2Q9UL42 364 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 SLC4A4Q9Y6R1 1079 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 COL14A1Q05707 1796 aaKnown RBP8.78□□□□□ -1
HMGXB4-202ENST00000418170 UBOX5O94941 541 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 KLRC1P26715 233 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 PPP1R2P41236 205 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 CTCFP49711 727 aaPredicted RBP8.78□□□□□ -1
HMGXB4-202ENST00000418170 MAP3K12Q12852 859 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 SEC23AQ15436 765 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 KIAA0753Q2KHM9 967 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 CHADLQ6NUI6 762 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 PIK3AP1Q6ZUJ8 805 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 LRRC34Q8IZ02 419 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 C4orf32Q8N8J7 132 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 PRCCQ92733 491 aaPredicted RBP8.78□□□□□ -1
HMGXB4-202ENST00000418170 CCDC134Q9H6E4 229 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 LRRC4CQ9HCJ2 640 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 GSG1L2A8MUP6 293 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 IGF2BP3O00425 579 aaKnown RBP eCLIP8.78□□□□□ -1
HMGXB4-202ENST00000418170 EVI5O60447 810 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 ITGA6P23229 1130 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 MMP13P45452 471 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 GALNTL6Q49A17 601 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 SPDYCQ5MJ68 293 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 GPIHBP1Q8IV16 184 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 BORCS6Q96GS4 357 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 NAF1Q96HR8 494 aaKnown RBP8.78□□□□□ -1
HMGXB4-202ENST00000418170 ELAC2Q9BQ52 826 aaKnown RBP8.78□□□□□ -1
HMGXB4-202ENST00000418170 FAM167BQ9BTA0 163 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 EDEM3Q9BZQ6 932 aa8.78□□□□□ -1
HMGXB4-202ENST00000418170 MBD4O95243 580 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 GCLCP48506 637 aaPredicted RBP8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 ARHGAP27Q6ZUM4 889 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 HOOK3Q86VS8 718 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 ACTRT1Q8TDG2 376 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 SEC14L1Q92503 715 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 TAF4BQ92750 862 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 ADAM7Q9H2U9 754 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 ABLIM1O14639 778 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 DAPK3O43293 454 aa8.77□□□□□ -1.01
HMGXB4-202ENST00000418170 CAND2O75155 1236 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms