RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 MSL3Q8N5Y2 521 aaKnown RBP14.93□□□□□ -0.02
HLA-DMB-258ENST00000418107 TIFAQ96CG3 184 aa14.93□□□□□ -0.02
HLA-DMB-258ENST00000418107 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.93□□□□□ -0.02
HLA-DMB-258ENST00000418107 NUP62CLQ9H1M0 184 aa14.93□□□□□ -0.02
HLA-DMB-258ENST00000418107 ZNF576Q9H609 170 aa14.93□□□□□ -0.02
HLA-DMB-258ENST00000418107 DACT1Q9NYF0 836 aa14.93□□□□□ -0.02
HLA-DMB-258ENST00000418107 TBX21Q9UL17 535 aa14.93□□□□□ -0.02
HLA-DMB-258ENST00000418107 SYNGAP1Q96PV0 1343 aa14.93□□□□□ -0.02
HLA-DMB-258ENST00000418107 DNAJC25-GNG10A0A024R161 153 aa14.92□□□□□ -0.02
HLA-DMB-258ENST00000418107 SYCE3A1L190 88 aa14.92□□□□□ -0.02
HLA-DMB-258ENST00000418107 ADCY6O43306 1168 aa14.92□□□□□ -0.02
HLA-DMB-258ENST00000418107 KINO60870 393 aaKnown RBP14.92□□□□□ -0.02
HLA-DMB-258ENST00000418107 MAMDC4Q6UXC1 1216 aa14.92□□□□□ -0.02
HLA-DMB-258ENST00000418107 CPXCR1Q8N123 301 aa14.92□□□□□ -0.02
HLA-DMB-258ENST00000418107 SYMPKQ92797 1274 aaKnown RBP14.92□□□□□ -0.02
HLA-DMB-258ENST00000418107 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.92□□□□□ -0.02
HLA-DMB-258ENST00000418107 A0A1B0GVL5 298 aa14.91□□□□□ -0.02
HLA-DMB-258ENST00000418107 GOLGA6L3A6NEY3 463 aa14.91□□□□□ -0.02
HLA-DMB-258ENST00000418107 DUSP11O75319 330 aaKnown RBP14.91□□□□□ -0.02
HLA-DMB-258ENST00000418107 NR1I2O75469 434 aa14.91□□□□□ -0.02
HLA-DMB-258ENST00000418107 C6orf222P0C671 652 aaPredicted RBP14.91□□□□□ -0.02
HLA-DMB-258ENST00000418107 CMA1P23946 247 aa14.91□□□□□ -0.02
HLA-DMB-258ENST00000418107 UBE2SQ16763 222 aa14.91□□□□□ -0.02
HLA-DMB-258ENST00000418107 MFSD5Q6N075 450 aa14.91□□□□□ -0.02
HLA-DMB-258ENST00000418107 C16orf59Q7L2K0 433 aa14.91□□□□□ -0.02
HLA-DMB-258ENST00000418107 GLT1D1Q96MS3 346 aa14.91□□□□□ -0.02
HLA-DMB-258ENST00000418107 CLIC6Q96NY7 704 aa14.91□□□□□ -0.02
HLA-DMB-258ENST00000418107 TMEM260Q9NX78 707 aa14.91□□□□□ -0.02
HLA-DMB-258ENST00000418107 FAM13BQ9NYF5 915 aa14.91□□□□□ -0.02
HLA-DMB-258ENST00000418107 GRXCR1A8MXD5 290 aa14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 M0R2N6 131 aa14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 CST5P28325 142 aaPredicted RBP14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 PBX2P40425 430 aa14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 FAM160A1Q05DH4 1040 aa14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 PTGDRQ13258 359 aa14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 PPIGQ13427 754 aaKnown RBP eCLIP14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 ACVR2BQ13705 512 aa14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 CAMK4Q16566 473 aa14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 TJAP1Q5JTD0 557 aa14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 AXDND1Q5T1B0 1012 aaPredicted RBP14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 ZNF467Q7Z7K2 595 aaPredicted RBP14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 PRPF38AQ8NAV1 312 aaKnown RBP14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 VTI1AQ96AJ9 217 aa14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 FGD4Q96M96 766 aa14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 TNMDQ9H2S6 317 aa14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 GOLPH3LQ9H4A5 285 aa14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 RAVER2Q9HCJ3 691 aaKnown RBP14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 SRPRBQ9Y5M8 271 aaKnown RBP14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 MROH7Q68CQ1 1323 aa14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 MYH7BA7E2Y1 1941 aa14.9□□□□□ -0.02
HLA-DMB-258ENST00000418107 CCNT1O60563 726 aaKnown RBP14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 ZBED4O75132 1171 aa14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 ASGR1P07306 291 aa14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 CSF2RAP15509 400 aa14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 CDK7P50613 346 aa14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 ZNF445P59923 1031 aa14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 LETM2Q2VYF4 491 aa14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 CCDC144BQ3MJ40 725 aa14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 TMEM240Q5SV17 173 aa14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 MCTP2Q6DN12 878 aa14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 NEK8Q86SG6 692 aa14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 PCSK9Q8NBP7 692 aaKnown RBP14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 TBCKQ8TEA7 893 aa14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 PPM1EQ8WY54 764 aa14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 PBX4Q9BYU1 374 aa14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 PPP1R12CQ9BZL4 782 aa14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 RANBP17Q9H2T7 1088 aaKnown RBP14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 CLSTN2Q9H4D0 955 aa14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 MRPL11Q9Y3B7 192 aaKnown RBP14.89□□□□□ -0.03
HLA-DMB-258ENST00000418107 ARVCFO00192 962 aa14.88□□□□□ -0.03
HLA-DMB-258ENST00000418107 WNT7AO00755 349 aa14.88□□□□□ -0.03
HLA-DMB-258ENST00000418107 ATP2A1O14983 1001 aa14.88□□□□□ -0.03
HLA-DMB-258ENST00000418107 ACRP10323 421 aa14.88□□□□□ -0.03
HLA-DMB-258ENST00000418107 NDUFA8P51970 172 aa14.88□□□□□ -0.03
HLA-DMB-258ENST00000418107 RESP18Q5W5W9 173 aa14.88□□□□□ -0.03
HLA-DMB-258ENST00000418107 USP17L6PQ6QN14 398 aa14.88□□□□□ -0.03
HLA-DMB-258ENST00000418107 LRSAM1Q6UWE0 723 aa14.88□□□□□ -0.03
HLA-DMB-258ENST00000418107 ARMCX2Q7L311 632 aa14.88□□□□□ -0.03
HLA-DMB-258ENST00000418107 ANKRD35Q8N283 1001 aa14.88□□□□□ -0.03
HLA-DMB-258ENST00000418107 SDF4Q9BRK5 362 aa14.88□□□□□ -0.03
HLA-DMB-258ENST00000418107 UPF3AQ9H1J1 476 aaKnown RBP14.88□□□□□ -0.03
HLA-DMB-258ENST00000418107 ABHD16BQ9H3Z7 469 aa14.88□□□□□ -0.03
HLA-DMB-258ENST00000418107 SPC25Q9HBM1 224 aa14.88□□□□□ -0.03
HLA-DMB-258ENST00000418107 FBXO2Q9UK22 296 aaPredicted RBP14.88□□□□□ -0.03
HLA-DMB-258ENST00000418107 A0A0U1RQG5 324 aaPredicted RBP14.87□□□□□ -0.03
HLA-DMB-258ENST00000418107 SPDYE3A6NKU9 549 aa14.87□□□□□ -0.03
HLA-DMB-258ENST00000418107 PFKFB1P16118 471 aa14.87□□□□□ -0.03
HLA-DMB-258ENST00000418107 SYKP43405 635 aa14.87□□□□□ -0.03
HLA-DMB-258ENST00000418107 GJA9P57773 515 aa14.87□□□□□ -0.03
HLA-DMB-258ENST00000418107 ATP2C1P98194 919 aaPredicted RBP14.87□□□□□ -0.03
HLA-DMB-258ENST00000418107 GNASQ5JWF2 1037 aa14.87□□□□□ -0.03
HLA-DMB-258ENST00000418107 SPECC1Q5M775 1068 aa14.87□□□□□ -0.03
HLA-DMB-258ENST00000418107 RASIP1Q5U651 963 aa14.87□□□□□ -0.03
HLA-DMB-258ENST00000418107 ZNF365Q70YC5 407 aa14.87□□□□□ -0.03
HLA-DMB-258ENST00000418107 FAM126BQ8IXS8 530 aa14.87□□□□□ -0.03
HLA-DMB-258ENST00000418107 TMEM199Q8N511 208 aa14.87□□□□□ -0.03
HLA-DMB-258ENST00000418107 ZNF579Q8NAF0 562 aaKnown RBP14.87□□□□□ -0.03
HLA-DMB-258ENST00000418107 GAS2L1Q99501 681 aaPredicted RBP14.87□□□□□ -0.03
HLA-DMB-258ENST00000418107 TSPY26PQ9H489 355 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms