RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 CLUL1Q15846 466 aa20.85■□□□□ 0.93
VCP-202ENST00000417448 ADCK5Q3MIX3 580 aa20.85■□□□□ 0.93
VCP-202ENST00000417448 RALYLQ86SE5 291 aaKnown RBP20.85■□□□□ 0.93
VCP-202ENST00000417448 FBXO11Q86XK2 927 aa20.85■□□□□ 0.93
VCP-202ENST00000417448 TMEM192Q8IY95 271 aa20.85■□□□□ 0.93
VCP-202ENST00000417448 ENAHQ8N8S7 591 aaPredicted RBP20.85■□□□□ 0.93
VCP-202ENST00000417448 NCOA7Q8NI08 942 aa20.85■□□□□ 0.93
VCP-202ENST00000417448 UPF3BQ9BZI7 483 aaKnown RBP20.85■□□□□ 0.93
VCP-202ENST00000417448 DMDP11532 3685 aa20.84■□□□□ 0.93
VCP-202ENST00000417448 CACNA1HO95180 2353 aa20.84■□□□□ 0.93
VCP-202ENST00000417448 SEC24BO95487 1268 aa20.84■□□□□ 0.93
VCP-202ENST00000417448 F2P00734 622 aa20.84■□□□□ 0.93
VCP-202ENST00000417448 MFSD10Q14728 455 aa20.84■□□□□ 0.93
VCP-202ENST00000417448 DGKDQ16760 1214 aa20.84■□□□□ 0.93
VCP-202ENST00000417448 CTC1Q2NKJ3 1217 aa20.84■□□□□ 0.93
VCP-202ENST00000417448 IQCA1Q86XH1 822 aa20.84■□□□□ 0.93
VCP-202ENST00000417448 RNF135Q8IUD6 432 aa20.84■□□□□ 0.93
VCP-202ENST00000417448 MB21D2Q8IYB1 491 aaPredicted RBP20.84■□□□□ 0.93
VCP-202ENST00000417448 LRRC2Q9BYS8 371 aa20.84■□□□□ 0.93
VCP-202ENST00000417448 OSBPL7Q9BZF2 842 aa20.84■□□□□ 0.93
VCP-202ENST00000417448 COL20A1Q9P218 1284 aa20.84■□□□□ 0.93
VCP-202ENST00000417448 BAZ2BQ9UIF8 2168 aaKnown RBP20.83■□□□□ 0.93
VCP-202ENST00000417448 WDR19Q8NEZ3 1342 aa20.83■□□□□ 0.93
VCP-202ENST00000417448 MBTPS2O43462 519 aa20.83■□□□□ 0.93
VCP-202ENST00000417448 ST18O60284 1047 aa20.83■□□□□ 0.93
VCP-202ENST00000417448 CPA1P15085 419 aa20.83■□□□□ 0.93
VCP-202ENST00000417448 TCF15Q12870 199 aa20.83■□□□□ 0.93
VCP-202ENST00000417448 KIAA0753Q2KHM9 967 aa20.83■□□□□ 0.93
VCP-202ENST00000417448 PLEKHG4Q58EX7 1191 aa20.83■□□□□ 0.93
VCP-202ENST00000417448 TBC1D5Q92609 795 aa20.83■□□□□ 0.93
VCP-202ENST00000417448 TCEANC2Q96MN5 208 aa20.83■□□□□ 0.93
VCP-202ENST00000417448 YME1L1Q96TA2 773 aa20.83■□□□□ 0.93
VCP-202ENST00000417448 UBAC1Q9BSL1 405 aa20.83■□□□□ 0.93
VCP-202ENST00000417448 DDX41Q9UJV9 622 aaKnown RBP20.83■□□□□ 0.93
VCP-202ENST00000417448 EMSYQ7Z589 1322 aa20.82■□□□□ 0.92
VCP-202ENST00000417448 B4DLN1 442 aa20.82■□□□□ 0.92
VCP-202ENST00000417448 IFIT3O14879 490 aaKnown RBP20.82■□□□□ 0.92
VCP-202ENST00000417448 PDHBP11177 359 aa20.82■□□□□ 0.92
VCP-202ENST00000417448 MRPL12P52815 198 aaKnown RBP20.82■□□□□ 0.92
VCP-202ENST00000417448 SEC23AQ15436 765 aa20.82■□□□□ 0.92
VCP-202ENST00000417448 TOP1MTQ969P6 601 aa20.82■□□□□ 0.92
VCP-202ENST00000417448 EMID1Q96A84 441 aaPredicted RBP20.82■□□□□ 0.92
VCP-202ENST00000417448 USP26Q9BXU7 913 aa20.82■□□□□ 0.92
VCP-202ENST00000417448 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.81■□□□□ 0.92
VCP-202ENST00000417448 PRC1O43663 620 aa20.81■□□□□ 0.92
VCP-202ENST00000417448 TBX10O75333 385 aa20.81■□□□□ 0.92
VCP-202ENST00000417448 REC8O95072 547 aa20.81■□□□□ 0.92
VCP-202ENST00000417448 GOLGA8HP0CJ92 632 aa20.81■□□□□ 0.92
VCP-202ENST00000417448 PTPN5P54829 565 aa20.81■□□□□ 0.92
VCP-202ENST00000417448 HYAL1Q12794 435 aa20.81■□□□□ 0.92
VCP-202ENST00000417448 USH1GQ495M9 461 aa20.81■□□□□ 0.92
VCP-202ENST00000417448 BMP8AQ7Z5Y6 402 aa20.81■□□□□ 0.92
VCP-202ENST00000417448 DGKHQ86XP1 1220 aa20.81■□□□□ 0.92
VCP-202ENST00000417448 EDAQ92838 391 aa20.81■□□□□ 0.92
VCP-202ENST00000417448 TTC14Q96N46 770 aa20.81■□□□□ 0.92
VCP-202ENST00000417448 TAAR1Q96RJ0 339 aa20.81■□□□□ 0.92
VCP-202ENST00000417448 KATNAL1Q9BW62 490 aa20.81■□□□□ 0.92
VCP-202ENST00000417448 CPVLQ9H3G5 476 aa20.81■□□□□ 0.92
VCP-202ENST00000417448 KAT14Q9H8E8 782 aa20.81■□□□□ 0.92
VCP-202ENST00000417448 ALG13Q9NP73 1137 aaKnown RBP20.81■□□□□ 0.92
VCP-202ENST00000417448 SNX14Q9Y5W7 946 aa20.81■□□□□ 0.92
VCP-202ENST00000417448 MYH6P13533 1939 aa20.8■□□□□ 0.92
VCP-202ENST00000417448 RSPH10B2B2RC85 870 aa20.8■□□□□ 0.92
VCP-202ENST00000417448 UPP2O95045 317 aa20.8■□□□□ 0.92
VCP-202ENST00000417448 LINC00271P0C7V0 271 aa20.8■□□□□ 0.92
VCP-202ENST00000417448 RSPH10BP0C881 870 aa20.8■□□□□ 0.92
VCP-202ENST00000417448 HSPA4P34932 840 aa20.8■□□□□ 0.92
VCP-202ENST00000417448 THPOP40225 353 aa20.8■□□□□ 0.92
VCP-202ENST00000417448 ZNF543Q08ER8 600 aa20.8■□□□□ 0.92
VCP-202ENST00000417448 RNF20Q5VTR2 975 aa20.8■□□□□ 0.92
VCP-202ENST00000417448 SERINC5Q86VE9 423 aa20.8■□□□□ 0.92
VCP-202ENST00000417448 PNMA1Q8ND90 353 aa20.8■□□□□ 0.92
VCP-202ENST00000417448 POP1Q99575 1024 aaKnown RBP20.8■□□□□ 0.92
VCP-202ENST00000417448 GTF2F1P35269 517 aaKnown RBP eCLIP20.79■□□□□ 0.92
VCP-202ENST00000417448 IFIT1BQ5T764 474 aaKnown RBP20.79■□□□□ 0.92
VCP-202ENST00000417448 RGS22Q8NE09 1264 aa20.79■□□□□ 0.92
VCP-202ENST00000417448 PPTC7Q8NI37 304 aa20.79■□□□□ 0.92
VCP-202ENST00000417448 SYTL5Q8TDW5 730 aaPredicted RBP20.79■□□□□ 0.92
VCP-202ENST00000417448 IGDCC4Q8TDY8 1250 aa20.79■□□□□ 0.92
VCP-202ENST00000417448 PNMA2Q9UL42 364 aa20.79■□□□□ 0.92
VCP-202ENST00000417448 PLXNA3P51805 1871 aa20.78■□□□□ 0.92
VCP-202ENST00000417448 TMEM221A6NGB7 291 aa20.78■□□□□ 0.92
VCP-202ENST00000417448 M0R296 226 aa20.78■□□□□ 0.92
VCP-202ENST00000417448 GRM6O15303 877 aa20.78■□□□□ 0.92
VCP-202ENST00000417448 LINC01565O15544 149 aa20.78■□□□□ 0.92
VCP-202ENST00000417448 SNHG28P0DPA3 235 aa20.78■□□□□ 0.92
VCP-202ENST00000417448 HOXD8P13378 290 aaPredicted RBP20.78■□□□□ 0.92
VCP-202ENST00000417448 SMAD4Q13485 552 aaKnown RBP20.78■□□□□ 0.92
VCP-202ENST00000417448 WTAPQ15007 396 aa20.78■□□□□ 0.92
VCP-202ENST00000417448 STXBP2Q15833 593 aa20.78■□□□□ 0.92
VCP-202ENST00000417448 TRIM67Q6ZTA4 783 aa20.78■□□□□ 0.92
VCP-202ENST00000417448 RAB11FIP4Q86YS3 637 aa20.78■□□□□ 0.92
VCP-202ENST00000417448 DHX37Q8IY37 1157 aaKnown RBP20.78■□□□□ 0.92
VCP-202ENST00000417448 NEK1Q96PY6 1258 aa20.78■□□□□ 0.92
VCP-202ENST00000417448 FAM86C1Q9NVL1 165 aa20.78■□□□□ 0.92
VCP-202ENST00000417448 STXBP3O00186 592 aa20.77■□□□□ 0.92
VCP-202ENST00000417448 NCK2O43639 380 aa20.77■□□□□ 0.92
VCP-202ENST00000417448 MCM5P33992 734 aa20.77■□□□□ 0.92
VCP-202ENST00000417448 CCDC178Q5BJE1 867 aa20.77■□□□□ 0.92
VCP-202ENST00000417448 NSUN6Q8TEA1 469 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 198.6 ms