RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 FGGP02679 453 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 MAGOHP61326 146 aaKnown RBP13.04□□□□□ -0.32
UBR4-205ENST00000417040 FAM186BQ8IYM0 893 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 ENOX1Q8TC92 643 aaKnown RBP13.04□□□□□ -0.32
UBR4-205ENST00000417040 NEK9Q8TD19 979 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 ANGPTL2Q9UKU9 493 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 A6NJR5 290 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 SFI1A8K8P3 1242 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 RANBP1P43487 201 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 NFRKBQ6P4R8 1299 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 FBXO11Q86XK2 927 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 RMDN2Q96LZ7 410 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 APOL6Q9BWW8 343 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 NOP53Q9NZM5 478 aaKnown RBP13.04□□□□□ -0.32
UBR4-205ENST00000417040 THEGQ9P2T0 379 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 PPFIA2O75334 1257 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 SKIP12755 728 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 YWHAEP62258 255 aaKnown RBP13.03□□□□□ -0.32
UBR4-205ENST00000417040 SMAD1Q15797 465 aaKnown RBP13.03□□□□□ -0.32
UBR4-205ENST00000417040 RSBN1LQ6PCB5 846 aaPredicted RBP13.03□□□□□ -0.32
UBR4-205ENST00000417040 RNF207Q6ZRF8 634 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 CDKL2Q92772 493 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 SNX24Q9Y343 169 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 PTK2Q05397 1052 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 TMTC4Q5T4D3 741 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 THAP9Q9H5L6 903 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 SLFN14P0C7P3 912 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 TTLL11Q8NHH1 800 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 CCDC138Q96M89 665 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 PIGSQ96S52 555 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 KRT82Q9NSB4 513 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 EPS15L1Q9UBC2 864 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 NOD1Q9Y239 953 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 ZMYM3Q14202 1370 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 GOLGA8IPA6NC78 632 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 GOLGA8JA6NMD2 632 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 SH2B2O14492 632 aaPredicted RBP13.03□□□□□ -0.32
UBR4-205ENST00000417040 ART3Q13508 389 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 ZBTB41Q5SVQ8 909 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 KRT80Q6KB66 452 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 RGS9BPQ6ZS82 235 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 KCTD6Q8NC69 237 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 PITPNM3Q9BZ71 974 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 ZWILCHQ9H900 591 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 F5H423 210 aaPredicted RBP13.03□□□□□ -0.32
UBR4-205ENST00000417040 MAPK13O15264 365 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 LCORLQ8N3X6 602 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 CCNYQ8ND76 341 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 TTC17Q96AE7 1141 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 CENPKQ9BS16 269 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 ABHD10Q9NUJ1 306 aa13.03□□□□□ -0.32
UBR4-205ENST00000417040 CFAP65Q6ZU64 1925 aaKnown RBP13.03□□□□□ -0.32
UBR4-205ENST00000417040 EEF1DP29692 281 aaKnown RBP13.02□□□□□ -0.32
UBR4-205ENST00000417040 SEPT9Q9UHD8 586 aaPredicted RBP13.02□□□□□ -0.32
UBR4-205ENST00000417040 KRT10P13645 584 aa13.02□□□□□ -0.32
UBR4-205ENST00000417040 FBXW10Q5XX13 1052 aa13.02□□□□□ -0.32
UBR4-205ENST00000417040 MYLK4Q86YV6 388 aaPredicted RBP13.02□□□□□ -0.32
UBR4-205ENST00000417040 PARP9Q8IXQ6 854 aa13.02□□□□□ -0.32
UBR4-205ENST00000417040 HSPH1Q92598 858 aa13.02□□□□□ -0.32
UBR4-205ENST00000417040 OSBP2Q969R2 916 aa13.02□□□□□ -0.32
UBR4-205ENST00000417040 KCNF1Q9H3M0 494 aa13.02□□□□□ -0.32
UBR4-205ENST00000417040 BAG5Q9UL15 447 aa13.02□□□□□ -0.32
UBR4-205ENST00000417040 ABCC10Q5T3U5 1492 aa13.02□□□□□ -0.32
UBR4-205ENST00000417040 ABCC12Q96J65 1359 aa13.02□□□□□ -0.32
UBR4-205ENST00000417040 POLGP54098 1239 aaPredicted RBP13.02□□□□□ -0.33
UBR4-205ENST00000417040 NT5C1BQ96P26 610 aa13.02□□□□□ -0.33
UBR4-205ENST00000417040 TRAIPQ9BWF2 469 aa13.02□□□□□ -0.33
UBR4-205ENST00000417040 ADAMTS1Q9UHI8 967 aa13.02□□□□□ -0.33
UBR4-205ENST00000417040 FNDC3AQ9Y2H6 1198 aaKnown RBP13.02□□□□□ -0.33
UBR4-205ENST00000417040 TRIM66O15016 1216 aa13.02□□□□□ -0.33
UBR4-205ENST00000417040 GSTA4O15217 222 aa13.02□□□□□ -0.33
UBR4-205ENST00000417040 TMEM191BP0C7N4 346 aa13.02□□□□□ -0.33
UBR4-205ENST00000417040 DDIT3P35638 169 aa13.02□□□□□ -0.33
UBR4-205ENST00000417040 SH3BGRP55822 239 aaPredicted RBP13.02□□□□□ -0.33
UBR4-205ENST00000417040 ZBED6P86452 979 aa13.02□□□□□ -0.33
UBR4-205ENST00000417040 GNPTABQ3T906 1256 aa13.02□□□□□ -0.33
UBR4-205ENST00000417040 PPP1R16BQ96T49 567 aa13.02□□□□□ -0.33
UBR4-205ENST00000417040 ABCF3Q9NUQ8 709 aa13.02□□□□□ -0.33
UBR4-205ENST00000417040 BBS9Q3SYG4 887 aa13.02□□□□□ -0.33
UBR4-205ENST00000417040 PAGR1Q9BTK6 254 aa13.02□□□□□ -0.33
UBR4-205ENST00000417040 CALN1Q9BXU9 219 aa13.02□□□□□ -0.33
UBR4-205ENST00000417040 YY1AP1Q9H869 796 aa13.02□□□□□ -0.33
UBR4-205ENST00000417040 SRPRBQ9Y5M8 271 aaKnown RBP13.02□□□□□ -0.33
UBR4-205ENST00000417040 CA4P22748 312 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 HABP4Q5JVS0 413 aaKnown RBP13.01□□□□□ -0.33
UBR4-205ENST00000417040 ZBTB33Q86T24 672 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 NLRP14Q86W24 1093 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 TRIML2Q8N7C3 387 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 POLD4Q9HCU8 107 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 ZSWIM5Q9P217 1185 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 DNAJC6O75061 913 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 CD58P19256 250 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 ESRRGP62508 458 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 TOB2Q14106 344 aaPredicted RBP13.01□□□□□ -0.33
UBR4-205ENST00000417040 C6orf118Q5T5N4 469 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 RESP18Q5W5W9 173 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 ST13P4Q8IZP2 240 aaPredicted RBP13.01□□□□□ -0.33
UBR4-205ENST00000417040 PI4K2BQ8TCG2 481 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 HEMGNQ9BXL5 484 aa13.01□□□□□ -0.33
UBR4-205ENST00000417040 NDST4Q9H3R1 872 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms