RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 TXKP42681 527 aa14.13□□□□□ -0.15
LRRTM1-205ENST00000417012 DYMQ7RTS9 669 aa14.13□□□□□ -0.15
LRRTM1-205ENST00000417012 LARP4BQ92615 738 aaKnown RBP14.13□□□□□ -0.15
LRRTM1-205ENST00000417012 MS4A14Q96JA4 679 aa14.13□□□□□ -0.15
LRRTM1-205ENST00000417012 SPZ1Q9BXG8 430 aa14.13□□□□□ -0.15
LRRTM1-205ENST00000417012 UBA5Q9GZZ9 404 aa14.13□□□□□ -0.15
LRRTM1-205ENST00000417012 SAMM50Q9Y512 469 aa14.13□□□□□ -0.15
LRRTM1-205ENST00000417012 KIAA0754O94854 1291 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 HEXIM1O94992 359 aaKnown RBP14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 ATP2B2Q01814 1243 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 ORC2Q13416 577 aaPredicted RBP14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 SLC9C1Q4G0N8 1177 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 TBCKQ8TEA7 893 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 SEC63Q9UGP8 760 aaKnown RBP14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 FRMPD2Q68DX3 1309 aaPredicted RBP14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 KRT14P02533 472 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 SLURP2P0DP57 97 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 ERCC3P19447 782 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 ATP1A2P50993 1020 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 GUCY2DQ02846 1103 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 ASTE1Q2TB18 679 aaPredicted RBP14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 KCTD16Q68DU8 428 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 SH2D3CQ8N5H7 860 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 IFT81Q8WYA0 676 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 NUCKS1Q9H1E3 243 aaKnown RBP14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 GDF3Q9NR23 364 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 NFU1Q9UMS0 254 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 DAGLAQ9Y4D2 1042 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 USP17L5A8MUK1 530 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 PPEF1O14829 653 aaPredicted RBP14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 CLSTN1O94985 981 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 GLI1P08151 1106 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 CARSP49589 748 aaKnown RBP14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 GRB10Q13322 594 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 DOK7Q18PE1 504 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 TMEM266Q2M3C6 531 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 ARHGAP27Q6ZUM4 889 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 EPB41L5Q9HCM4 733 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 BLOC1S4Q9NUP1 217 aa14.12□□□□□ -0.15
LRRTM1-205ENST00000417012 SCNN1DP51172 638 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 DNA2P51530 1060 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 LRRC55Q6ZSA7 311 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 SPATS2Q86XZ4 545 aaKnown RBP14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 CNPY4Q8N129 248 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 REXO1Q8N1G1 1221 aaKnown RBP14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 NEDD1Q8NHV4 660 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 YY1AP1Q9H869 796 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 ZNF287Q9HBT7 754 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 NLRC4Q9NPP4 1024 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 ATXN2Q99700 1313 aaKnown RBP14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 RBAK-RBAKDNI3L0D1 243 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 ZEB2O60315 1214 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 HOXA10P31260 410 aaPredicted RBP14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 HOXA7P31268 230 aaPredicted RBP14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 USP8P40818 1118 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 CALCRLQ16602 461 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 SFMBT2Q5VUG0 894 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 KDM7AQ6ZMT4 941 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 CERS5Q8N5B7 392 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 KAT2BQ92831 832 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 PIGSQ96S52 555 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 RAB34Q9BZG1 259 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 RIC8AQ9NPQ8 531 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 CEP72Q9P209 647 aa14.11□□□□□ -0.15
LRRTM1-205ENST00000417012 ESYT3A0FGR9 886 aa14.1□□□□□ -0.15
LRRTM1-205ENST00000417012 GRID2IPA4D2P6 1211 aa14.1□□□□□ -0.15
LRRTM1-205ENST00000417012 PALMO75781 387 aa14.1□□□□□ -0.15
LRRTM1-205ENST00000417012 SERPING1P05155 500 aa14.1□□□□□ -0.15
LRRTM1-205ENST00000417012 SLC27A3Q5K4L6 730 aa14.1□□□□□ -0.15
LRRTM1-205ENST00000417012 HGSNATQ68CP4 663 aa14.1□□□□□ -0.15
LRRTM1-205ENST00000417012 MCTP2Q6DN12 878 aa14.1□□□□□ -0.15
LRRTM1-205ENST00000417012 TMC4Q7Z404 712 aa14.1□□□□□ -0.15
LRRTM1-205ENST00000417012 LRRC47Q8N1G4 583 aaKnown RBP14.1□□□□□ -0.15
LRRTM1-205ENST00000417012 LRRC27Q9C0I9 530 aa14.1□□□□□ -0.15
LRRTM1-205ENST00000417012 DDX4Q9NQI0 724 aaKnown RBP14.1□□□□□ -0.15
LRRTM1-205ENST00000417012 CCDC40Q4G0X9 1142 aa14.1□□□□□ -0.15
LRRTM1-205ENST00000417012 IQCKQ8N0W5 287 aa14.1□□□□□ -0.15
LRRTM1-205ENST00000417012 MREGQ8N565 214 aa14.1□□□□□ -0.15
LRRTM1-205ENST00000417012 FTCDO95954 541 aa14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 FAM153BP0C7A2 387 aa14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 PLCG2P16885 1265 aa14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 GUCY2FP51841 1108 aa14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 FAM153CQ494X1 144 aa14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 MICALCLQ6ZW33 695 aa14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 KRT27Q7Z3Y8 459 aa14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 OTUD6BQ8N6M0 293 aa14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 SYN2Q92777 582 aaPredicted RBP14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 PNMA5Q96PV4 448 aa14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 CRAMP1Q96RY5 1269 aa14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 BIN2Q9UBW5 565 aaPredicted RBP14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 FAM153AQ9UHL3 310 aa14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 GAKO14976 1311 aa14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 BRWD3Q6RI45 1802 aa14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 ZSCAN5CA6NGD5 496 aaPredicted RBP14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 ZNF233A6NK53 670 aa14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 NR1D1P20393 614 aa14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 LSP1P33241 339 aa14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 FXR2P51116 673 aaKnown RBP eCLIP14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 PSMD2Q13200 908 aa14.09□□□□□ -0.15
LRRTM1-205ENST00000417012 WHAMMQ8TF30 809 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms