RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 NUB1Q9Y5A7 615 aa5.19□□□□□ -1.58
TRAPPC13-203ENST00000415825 MEFVO15553 781 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC13-203ENST00000415825 CNOT4O95628 575 aaKnown RBP5.18□□□□□ -1.58
TRAPPC13-203ENST00000415825 BCL6P41182 706 aa5.18□□□□□ -1.58
TRAPPC13-203ENST00000415825 POLNQ7Z5Q5 900 aa5.18□□□□□ -1.58
TRAPPC13-203ENST00000415825 REXO1L1PQ8IX06 675 aa5.18□□□□□ -1.58
TRAPPC13-203ENST00000415825 ARRDC4Q8NCT1 418 aa5.18□□□□□ -1.58
TRAPPC13-203ENST00000415825 EXTL1Q92935 676 aa5.18□□□□□ -1.58
TRAPPC13-203ENST00000415825 DLL4Q9NR61 685 aa5.18□□□□□ -1.58
TRAPPC13-203ENST00000415825 MYOTQ9UBF9 498 aa5.18□□□□□ -1.58
TRAPPC13-203ENST00000415825 TCRBV5S2A0A599 114 aa5.17□□□□□ -1.58
TRAPPC13-203ENST00000415825 H7BY64 318 aa5.17□□□□□ -1.58
TRAPPC13-203ENST00000415825 ACO1P21399 889 aaKnown RBP5.17□□□□□ -1.58
TRAPPC13-203ENST00000415825 ATXN1P54253 815 aaKnown RBP5.17□□□□□ -1.58
TRAPPC13-203ENST00000415825 TUBA3CQ13748 450 aa5.17□□□□□ -1.58
TRAPPC13-203ENST00000415825 USP10Q14694 798 aaKnown RBP5.17□□□□□ -1.58
TRAPPC13-203ENST00000415825 INF2Q27J81 1249 aa5.17□□□□□ -1.58
TRAPPC13-203ENST00000415825 KIAA1211LQ6NV74 962 aa5.17□□□□□ -1.58
TRAPPC13-203ENST00000415825 TUBA3EQ6PEY2 450 aa5.17□□□□□ -1.58
TRAPPC13-203ENST00000415825 MRGPRGQ86SM5 289 aa5.17□□□□□ -1.58
TRAPPC13-203ENST00000415825 NUDT10Q8NFP7 164 aa5.17□□□□□ -1.58
TRAPPC13-203ENST00000415825 NUDT11Q96G61 164 aa5.17□□□□□ -1.58
TRAPPC13-203ENST00000415825 EPB41L1Q9H4G0 881 aa5.17□□□□□ -1.58
TRAPPC13-203ENST00000415825 EMC9Q9Y3B6 208 aa5.17□□□□□ -1.58
TRAPPC13-203ENST00000415825 ZNF143P52747 638 aaPredicted RBP5.16□□□□□ -1.58
TRAPPC13-203ENST00000415825 HHEXQ03014 270 aa5.16□□□□□ -1.58
TRAPPC13-203ENST00000415825 AGBL4Q5VU57 503 aa5.16□□□□□ -1.58
TRAPPC13-203ENST00000415825 CCDC81Q6ZN84 652 aa5.16□□□□□ -1.58
TRAPPC13-203ENST00000415825 NEIL1Q96FI4 390 aaPredicted RBP5.16□□□□□ -1.58
TRAPPC13-203ENST00000415825 SMOC1Q9H4F8 434 aa5.16□□□□□ -1.58
TRAPPC13-203ENST00000415825 AURKAIP1Q9NWT8 199 aaPredicted RBP5.16□□□□□ -1.58
TRAPPC13-203ENST00000415825 REXO2Q9Y3B8 237 aaKnown RBP5.16□□□□□ -1.58
TRAPPC13-203ENST00000415825 A0A1W2PQH9 124 aa5.15□□□□□ -1.59
TRAPPC13-203ENST00000415825 RAMP2O60895 175 aa5.15□□□□□ -1.59
TRAPPC13-203ENST00000415825 RAD17O75943 681 aa5.15□□□□□ -1.59
TRAPPC13-203ENST00000415825 LRG1P02750 347 aa5.15□□□□□ -1.59
TRAPPC13-203ENST00000415825 DNAJA1P31689 397 aaKnown RBP5.15□□□□□ -1.59
TRAPPC13-203ENST00000415825 LSAMPQ13449 338 aa5.15□□□□□ -1.59
TRAPPC13-203ENST00000415825 GTF2IRD2BQ6EKJ0 949 aa5.15□□□□□ -1.59
TRAPPC13-203ENST00000415825 VHLLQ6RSH7 139 aa5.15□□□□□ -1.59
TRAPPC13-203ENST00000415825 GPR155Q7Z3F1 870 aa5.15□□□□□ -1.59
TRAPPC13-203ENST00000415825 GTF2IRD2Q86UP8 949 aa5.15□□□□□ -1.59
TRAPPC13-203ENST00000415825 Q8N1Y9 231 aa5.15□□□□□ -1.59
TRAPPC13-203ENST00000415825 ZNF483Q8TF39 744 aaPredicted RBP5.15□□□□□ -1.59
TRAPPC13-203ENST00000415825 AJUBAQ96IF1 538 aa5.15□□□□□ -1.59
TRAPPC13-203ENST00000415825 CARD11Q9BXL7 1154 aa5.15□□□□□ -1.59
TRAPPC13-203ENST00000415825 NKX2-4Q9H2Z4 354 aa5.15□□□□□ -1.59
TRAPPC13-203ENST00000415825 C12orf65Q9H3J6 166 aaKnown RBP5.15□□□□□ -1.59
TRAPPC13-203ENST00000415825 CLDND1Q9NY35 253 aa5.15□□□□□ -1.59
TRAPPC13-203ENST00000415825 H0Y858 1186 aa5.14□□□□□ -1.59
TRAPPC13-203ENST00000415825 SNRPB2P08579 225 aaKnown RBP5.14□□□□□ -1.59
TRAPPC13-203ENST00000415825 CR2P20023 1033 aa5.14□□□□□ -1.59
TRAPPC13-203ENST00000415825 GIPRP48546 466 aa5.14□□□□□ -1.59
TRAPPC13-203ENST00000415825 ZMAT1Q5H9K5 638 aa5.14□□□□□ -1.59
TRAPPC13-203ENST00000415825 EMC4Q5J8M3 183 aa5.14□□□□□ -1.59
TRAPPC13-203ENST00000415825 ZNF654Q8IZM8 581 aa5.14□□□□□ -1.59
TRAPPC13-203ENST00000415825 FUKQ8N0W3 1084 aa5.14□□□□□ -1.59
TRAPPC13-203ENST00000415825 CPLX3Q8WVH0 158 aa5.14□□□□□ -1.59
TRAPPC13-203ENST00000415825 NAF1Q96HR8 494 aaKnown RBP5.14□□□□□ -1.59
TRAPPC13-203ENST00000415825 OR14A2Q96R54 314 aa5.14□□□□□ -1.59
TRAPPC13-203ENST00000415825 ARHGAP20Q9P2F6 1191 aa5.14□□□□□ -1.59
TRAPPC13-203ENST00000415825 LRP2BPQ9P2M1 347 aa5.14□□□□□ -1.59
TRAPPC13-203ENST00000415825 PCDHA2Q9Y5H9 948 aa5.14□□□□□ -1.59
TRAPPC13-203ENST00000415825 CDC14BO60729 498 aa5.13□□□□□ -1.59
TRAPPC13-203ENST00000415825 TADA3O75528 432 aa5.13□□□□□ -1.59
TRAPPC13-203ENST00000415825 KLHL18O94889 574 aa5.13□□□□□ -1.59
TRAPPC13-203ENST00000415825 CPP00450 1065 aa5.13□□□□□ -1.59
TRAPPC13-203ENST00000415825 CSF2RBP32927 897 aa5.13□□□□□ -1.59
TRAPPC13-203ENST00000415825 ECI1P42126 302 aa5.13□□□□□ -1.59
TRAPPC13-203ENST00000415825 KCNJ6P48051 423 aa5.13□□□□□ -1.59
TRAPPC13-203ENST00000415825 SOX9P48436 509 aa5.13□□□□□ -1.59
TRAPPC13-203ENST00000415825 DGCR2P98153 550 aa5.13□□□□□ -1.59
TRAPPC13-203ENST00000415825 ZNF394Q53GI3 561 aa5.13□□□□□ -1.59
TRAPPC13-203ENST00000415825 CYP4F22Q6NT55 531 aa5.13□□□□□ -1.59
TRAPPC13-203ENST00000415825 TRIM59Q8IWR1 403 aa5.13□□□□□ -1.59
TRAPPC13-203ENST00000415825 FRS2Q8WU20 508 aa5.13□□□□□ -1.59
TRAPPC13-203ENST00000415825 CCDC140Q96MF4 163 aa5.13□□□□□ -1.59
TRAPPC13-203ENST00000415825 PRRX2Q99811 253 aa5.13□□□□□ -1.59
TRAPPC13-203ENST00000415825 GINM1Q9NU53 330 aa5.13□□□□□ -1.59
TRAPPC13-203ENST00000415825 EFR3BQ9Y2G0 817 aa5.13□□□□□ -1.59
TRAPPC13-203ENST00000415825 ACRV1P26436 265 aa5.12□□□□□ -1.59
TRAPPC13-203ENST00000415825 HOXC12P31275 282 aa5.12□□□□□ -1.59
TRAPPC13-203ENST00000415825 LTBRP36941 435 aa5.12□□□□□ -1.59
TRAPPC13-203ENST00000415825 RPS19P39019 145 aaKnown RBP5.12□□□□□ -1.59
TRAPPC13-203ENST00000415825 GLRBP48167 497 aa5.12□□□□□ -1.59
TRAPPC13-203ENST00000415825 NCAPHQ15003 741 aa5.12□□□□□ -1.59
TRAPPC13-203ENST00000415825 CSRP2Q16527 193 aa5.12□□□□□ -1.59
TRAPPC13-203ENST00000415825 IGFL4Q6B9Z1 124 aa5.12□□□□□ -1.59
TRAPPC13-203ENST00000415825 DTX3Q8N9I9 347 aa5.12□□□□□ -1.59
TRAPPC13-203ENST00000415825 NPLOC4Q8TAT6 608 aa5.12□□□□□ -1.59
TRAPPC13-203ENST00000415825 KLHL6Q8WZ60 621 aa5.12□□□□□ -1.59
TRAPPC13-203ENST00000415825 MMRN2Q9H8L6 949 aa5.12□□□□□ -1.59
TRAPPC13-203ENST00000415825 APEX2Q9UBZ4 518 aa5.12□□□□□ -1.59
TRAPPC13-203ENST00000415825 ZFP69BQ9UJL9 534 aa5.12□□□□□ -1.59
TRAPPC13-203ENST00000415825 DDX41Q9UJV9 622 aaKnown RBP5.12□□□□□ -1.59
TRAPPC13-203ENST00000415825 OAZ3Q9UMX2 235 aa5.12□□□□□ -1.59
TRAPPC13-203ENST00000415825 PCDHGB7Q9Y5F8 929 aa5.12□□□□□ -1.59
TRAPPC13-203ENST00000415825 ENO2P09104 434 aaPredicted RBP5.11□□□□□ -1.59
TRAPPC13-203ENST00000415825 C1SP09871 688 aa5.11□□□□□ -1.59
TRAPPC13-203ENST00000415825 HIBADHP31937 336 aaKnown RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms