RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 ECM1Q16610 540 aa10.9□□□□□ -0.67
RIF1-202ENST00000414861 ZSCAN23Q3MJ62 389 aa10.9□□□□□ -0.67
RIF1-202ENST00000414861 NAALADL2Q58DX5 795 aa10.9□□□□□ -0.67
RIF1-202ENST00000414861 NLRX1Q86UT6 975 aa10.9□□□□□ -0.67
RIF1-202ENST00000414861 SNX29Q8TEQ0 813 aa10.9□□□□□ -0.67
RIF1-202ENST00000414861 USP6NLQ92738 828 aa10.9□□□□□ -0.67
RIF1-202ENST00000414861 ERCC4Q92889 916 aaPredicted RBP10.9□□□□□ -0.67
RIF1-202ENST00000414861 TRIM47Q96LD4 638 aa10.9□□□□□ -0.67
RIF1-202ENST00000414861 RIT2Q99578 217 aa10.9□□□□□ -0.67
RIF1-202ENST00000414861 CFHR5Q9BXR6 569 aa10.9□□□□□ -0.67
RIF1-202ENST00000414861 RAB34Q9BZG1 259 aa10.9□□□□□ -0.67
RIF1-202ENST00000414861 NUP62CLQ9H1M0 184 aa10.9□□□□□ -0.67
RIF1-202ENST00000414861 DISC1Q9NRI5 854 aa10.9□□□□□ -0.67
RIF1-202ENST00000414861 GJD2Q9UKL4 321 aa10.9□□□□□ -0.67
RIF1-202ENST00000414861 TELO2Q9Y4R8 837 aa10.9□□□□□ -0.67
RIF1-202ENST00000414861 FOXN1O15353 648 aa10.89□□□□□ -0.67
RIF1-202ENST00000414861 SORBS3O60504 671 aa10.89□□□□□ -0.67
RIF1-202ENST00000414861 ARIH2O95376 493 aa10.89□□□□□ -0.67
RIF1-202ENST00000414861 HSPA6P17066 643 aa10.89□□□□□ -0.67
RIF1-202ENST00000414861 PLCG1P19174 1290 aa10.89□□□□□ -0.67
RIF1-202ENST00000414861 MAP2K5Q13163 448 aa10.89□□□□□ -0.67
RIF1-202ENST00000414861 GNPTABQ3T906 1256 aa10.89□□□□□ -0.67
RIF1-202ENST00000414861 PNMA5Q96PV4 448 aa10.89□□□□□ -0.67
RIF1-202ENST00000414861 TEKT3Q9BXF9 490 aa10.89□□□□□ -0.67
RIF1-202ENST00000414861 SERTAD1Q9UHV2 236 aa10.89□□□□□ -0.67
RIF1-202ENST00000414861 CCNE2O96020 404 aa10.89□□□□□ -0.67
RIF1-202ENST00000414861 PTGS1P23219 599 aa10.89□□□□□ -0.67
RIF1-202ENST00000414861 ICAM3P32942 547 aa10.89□□□□□ -0.67
RIF1-202ENST00000414861 TXLNAP40222 546 aa10.89□□□□□ -0.67
RIF1-202ENST00000414861 PSMC4P43686 418 aa10.89□□□□□ -0.67
RIF1-202ENST00000414861 GRB10Q13322 594 aa10.89□□□□□ -0.67
RIF1-202ENST00000414861 ZNF467Q7Z7K2 595 aaPredicted RBP10.89□□□□□ -0.67
RIF1-202ENST00000414861 GRAMD1CQ8IYS0 662 aa10.89□□□□□ -0.67
RIF1-202ENST00000414861 FLRT1Q9NZU1 646 aa10.89□□□□□ -0.67
RIF1-202ENST00000414861 CASP8AP2Q9UKL3 1982 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 LOC102724159A0A0B4J2E5 919 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 POTEB3A0JP26 581 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 ASB14A6NK59 587 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 MED24O75448 989 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 SNAI1O95863 264 aaPredicted RBP10.88□□□□□ -0.67
RIF1-202ENST00000414861 UBA1P22314 1058 aaKnown RBP10.88□□□□□ -0.67
RIF1-202ENST00000414861 PWP2Q15269 919 aaKnown RBP10.88□□□□□ -0.67
RIF1-202ENST00000414861 CCL14Q16627 93 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 TMEM63BQ5T3F8 832 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 PDXDC2PQ6P474 469 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 POTEBQ6S5H4 581 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 MAMDC4Q6UXC1 1216 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 KRBA2Q6ZNG9 492 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 KCNK18Q7Z418 384 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 CKAP2LQ8IYA6 745 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 RASSF8Q8NHQ8 419 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 SYAP1Q96A49 352 aaPredicted RBP10.88□□□□□ -0.67
RIF1-202ENST00000414861 KATNBL1Q9H079 304 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 PDGFCQ9NRA1 345 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.88□□□□□ -0.67
RIF1-202ENST00000414861 DIS3Q9Y2L1 958 aaKnown RBP10.88□□□□□ -0.67
RIF1-202ENST00000414861 MYH9P35579 1960 aaKnown RBP10.88□□□□□ -0.67
RIF1-202ENST00000414861 SYCE3A1L190 88 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 POTEFA5A3E0 1075 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 B4DLN1 442 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 MAFGO15525 162 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 HOXC6P09630 235 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 SPATA31C1P0DKV0 1188 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 CYP2B6P20813 491 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 STAT6P42226 847 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 FCGRTP55899 365 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 C1QTNF8P60827 252 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 CYP4A11Q02928 519 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 TMEM119Q4V9L6 283 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 KRT79Q5XKE5 535 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 POTEGQ6S5H5 508 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 CNNM3Q8NE01 707 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 SOCS4Q8WXH5 440 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 CDHR1Q96JP9 859 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 MPHOSPH6Q99547 160 aaKnown RBP10.88□□□□□ -0.67
RIF1-202ENST00000414861 MTRQ99707 1265 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 EIF2AK1Q9BQI3 630 aaKnown RBP10.88□□□□□ -0.67
RIF1-202ENST00000414861 TNMDQ9H2S6 317 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 RGL1Q9NZL6 768 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 GABRQQ9UN88 632 aa10.88□□□□□ -0.67
RIF1-202ENST00000414861 PRR29P0C7W0 189 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 CCT6AP40227 531 aaKnown RBP10.87□□□□□ -0.67
RIF1-202ENST00000414861 SP4Q02446 784 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 SP3Q02447 781 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 CATSPER3Q86XQ3 398 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 STAMQ92783 540 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 TIGD1Q96MW7 591 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 APBA2Q99767 749 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 TINF2Q9BSI4 451 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 TBC1D22BQ9NU19 505 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 BLOC1S4Q9NUP1 217 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 BRCA2P51587 3418 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 A0A087WWV3 80 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 SLFN14P0C7P3 912 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 CASP1P29466 404 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 PNOCQ13519 176 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 LY6KQ17RY6 165 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 RRAGBQ5VZM2 374 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 TAPT1Q6NXT6 567 aa10.87□□□□□ -0.67
RIF1-202ENST00000414861 RBM43Q6ZSC3 357 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms