RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 ZNF792Q3KQV3 632 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 ABRAQ8N0Z2 381 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 SLC5A5Q92911 643 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 FAM20AQ96MK3 541 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 NUDT12Q9BQG2 462 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 MMTAG2Q9BU76 263 aaKnown RBP17.47■□□□□ 0.39
SHMT2-202ENST00000414700 ARHGAP39Q9C0H5 1083 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 BCAS3Q9H6U6 928 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 VAV3Q9UKW4 847 aa17.47■□□□□ 0.39
SHMT2-202ENST00000414700 POLR2DO15514 142 aaKnown RBP17.46■□□□□ 0.39
SHMT2-202ENST00000414700 PSMD10O75832 226 aa17.46■□□□□ 0.39
SHMT2-202ENST00000414700 KIF20AO95235 890 aa17.46■□□□□ 0.39
SHMT2-202ENST00000414700 MAP2K2P36507 400 aa17.46■□□□□ 0.39
SHMT2-202ENST00000414700 KARSQ15046 597 aaKnown RBP17.46■□□□□ 0.39
SHMT2-202ENST00000414700 LRCH2Q5VUJ6 765 aa17.46■□□□□ 0.39
SHMT2-202ENST00000414700 XRRA1Q6P2D8 792 aa17.46■□□□□ 0.39
SHMT2-202ENST00000414700 NIPA1Q7RTP0 329 aa17.46■□□□□ 0.39
SHMT2-202ENST00000414700 ZNF710Q8N1W2 664 aa17.46■□□□□ 0.39
SHMT2-202ENST00000414700 AGO4Q9HCK5 861 aaKnown RBP17.46■□□□□ 0.39
SHMT2-202ENST00000414700 LRWD1Q9UFC0 647 aa17.46■□□□□ 0.39
SHMT2-202ENST00000414700 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.45■□□□□ 0.38
SHMT2-202ENST00000414700 ZRSR1Q15695 479 aaKnown RBP17.45■□□□□ 0.38
SHMT2-202ENST00000414700 TMEM266Q2M3C6 531 aa17.45■□□□□ 0.38
SHMT2-202ENST00000414700 LRRC15Q8TF66 581 aa17.45■□□□□ 0.38
SHMT2-202ENST00000414700 PLIN2Q99541 437 aa17.45■□□□□ 0.38
SHMT2-202ENST00000414700 TSPY26PQ9H489 355 aa17.45■□□□□ 0.38
SHMT2-202ENST00000414700 RNF186Q9NXI6 227 aa17.45■□□□□ 0.38
SHMT2-202ENST00000414700 DDX39AO00148 427 aaKnown RBP17.45■□□□□ 0.38
SHMT2-202ENST00000414700 DHX15O43143 795 aaKnown RBP17.45■□□□□ 0.38
SHMT2-202ENST00000414700 PDE4DQ08499 809 aa17.45■□□□□ 0.38
SHMT2-202ENST00000414700 PDIA5Q14554 519 aa17.45■□□□□ 0.38
SHMT2-202ENST00000414700 LONRF3Q496Y0 759 aa17.45■□□□□ 0.38
SHMT2-202ENST00000414700 SEPT14Q6ZU15 432 aa17.45■□□□□ 0.38
SHMT2-202ENST00000414700 OTOP1Q7RTM1 612 aa17.45■□□□□ 0.38
SHMT2-202ENST00000414700 DPP9Q86TI2 863 aa17.45■□□□□ 0.38
SHMT2-202ENST00000414700 NPLOC4Q8TAT6 608 aa17.45■□□□□ 0.38
SHMT2-202ENST00000414700 AK8Q96MA6 479 aa17.45■□□□□ 0.38
SHMT2-202ENST00000414700 ZNF236Q9UL36 1845 aa17.45■□□□□ 0.38
SHMT2-202ENST00000414700 EML1O00423 815 aa17.44■□□□□ 0.38
SHMT2-202ENST00000414700 CHMP2AO43633 222 aa17.44■□□□□ 0.38
SHMT2-202ENST00000414700 EIF3JO75822 258 aaKnown RBP17.44■□□□□ 0.38
SHMT2-202ENST00000414700 LETM1O95202 739 aaPredicted RBP17.44■□□□□ 0.38
SHMT2-202ENST00000414700 UBA7P41226 1012 aa17.44■□□□□ 0.38
SHMT2-202ENST00000414700 DNTTIP2Q5QJE6 756 aaKnown RBP17.44■□□□□ 0.38
SHMT2-202ENST00000414700 MORN1Q5T089 497 aa17.44■□□□□ 0.38
SHMT2-202ENST00000414700 REM2Q8IYK8 340 aaPredicted RBP17.44■□□□□ 0.38
SHMT2-202ENST00000414700 ERCC4Q92889 916 aaPredicted RBP17.44■□□□□ 0.38
SHMT2-202ENST00000414700 GPRASP2Q96D09 838 aa17.44■□□□□ 0.38
SHMT2-202ENST00000414700 THSD7BQ9C0I4 1608 aa17.44■□□□□ 0.38
SHMT2-202ENST00000414700 GAS7O60861 476 aa17.43■□□□□ 0.38
SHMT2-202ENST00000414700 KINO60870 393 aaKnown RBP17.43■□□□□ 0.38
SHMT2-202ENST00000414700 SP2Q02086 613 aa17.43■□□□□ 0.38
SHMT2-202ENST00000414700 NCAPH2Q6IBW4 605 aa17.43■□□□□ 0.38
SHMT2-202ENST00000414700 CABP7Q86V35 215 aa17.43■□□□□ 0.38
SHMT2-202ENST00000414700 DHX58Q96C10 678 aa17.43■□□□□ 0.38
SHMT2-202ENST00000414700 TELO2Q9Y4R8 837 aa17.43■□□□□ 0.38
SHMT2-202ENST00000414700 SLC15A5A6NIM6 579 aa17.43■□□□□ 0.38
SHMT2-202ENST00000414700 TNPO2O14787 897 aaKnown RBP17.43■□□□□ 0.38
SHMT2-202ENST00000414700 SORBS3O60504 671 aa17.43■□□□□ 0.38
SHMT2-202ENST00000414700 ECM1Q16610 540 aa17.43■□□□□ 0.38
SHMT2-202ENST00000414700 ARMCX2Q7L311 632 aa17.43■□□□□ 0.38
SHMT2-202ENST00000414700 FBXO16Q8IX29 292 aaPredicted RBP17.43■□□□□ 0.38
SHMT2-202ENST00000414700 MAML3Q96JK9 1138 aa17.43■□□□□ 0.38
SHMT2-202ENST00000414700 RAB34Q9BZG1 259 aa17.43■□□□□ 0.38
SHMT2-202ENST00000414700 CCSER1Q9C0I3 900 aa17.43■□□□□ 0.38
SHMT2-202ENST00000414700 UNC45AQ9H3U1 944 aa17.43■□□□□ 0.38
SHMT2-202ENST00000414700 DDX19AQ9NUU7 478 aaKnown RBP17.43■□□□□ 0.38
SHMT2-202ENST00000414700 SERTAD1Q9UHV2 236 aa17.43■□□□□ 0.38
SHMT2-202ENST00000414700 FOXN1O15353 648 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 STAM2O75886 525 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 KCNA2P16389 499 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 LACTBP83111 547 aaPredicted RBP17.42■□□□□ 0.38
SHMT2-202ENST00000414700 E2F4Q16254 413 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 NAALADL2Q58DX5 795 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 CCDC183Q5T5S1 534 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 B3GNT9Q6UX72 402 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 NLRX1Q86UT6 975 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 RNF214Q8ND24 703 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 MORC4Q8TE76 937 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 SNX29Q8TEQ0 813 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 SYAP1Q96A49 352 aaPredicted RBP17.42■□□□□ 0.38
SHMT2-202ENST00000414700 TRIM47Q96LD4 638 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 NUP62CLQ9H1M0 184 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 CLSTN2Q9H4D0 955 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 DISC1Q9NRI5 854 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 GJD2Q9UKL4 321 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 SPATA31C2B4DYI2 1134 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 ACTN4O43707 911 aaKnown RBP17.42■□□□□ 0.38
SHMT2-202ENST00000414700 PSMC4P43686 418 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 MAP2K5Q13163 448 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 PPP2R5CQ13362 524 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 GNPTABQ3T906 1256 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 TMEM63BQ5T3F8 832 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 RIT2Q99578 217 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 WDR81Q562E7 1941 aa17.42■□□□□ 0.38
SHMT2-202ENST00000414700 ARIH2O95376 493 aa17.41■□□□□ 0.38
SHMT2-202ENST00000414700 PLCG1P19174 1290 aa17.41■□□□□ 0.38
SHMT2-202ENST00000414700 PTGS1P23219 599 aa17.41■□□□□ 0.38
SHMT2-202ENST00000414700 GRB10Q13322 594 aa17.41■□□□□ 0.38
SHMT2-202ENST00000414700 KRBA2Q6ZNG9 492 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms