RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 CDC45O75419 566 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 BAIAP3O94812 1187 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 ARHGEF15O94989 841 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 SMIM10L2AP0DMW4 78 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 SMIM10L2BP0DMW5 78 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 KCNJ6P48051 423 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 WDR5P61964 334 aaKnown RBP17.88■□□□□ 0.45
ACTB-202ENST00000414620 DEFB103AP81534 67 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 RBL2Q08999 1139 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 NEDD9Q14511 834 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 ADCK5Q3MIX3 580 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 UTP14CQ5TAP6 766 aaKnown RBP17.88■□□□□ 0.45
ACTB-202ENST00000414620 PCNX4Q63HM2 1172 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 METTL7BQ6UX53 244 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 HEATR3Q7Z4Q2 680 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 HERC6Q8IVU3 1022 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 FANCBQ8NB91 859 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 TUT1Q9H6E5 874 aaKnown RBP17.88■□□□□ 0.45
ACTB-202ENST00000414620 PSTPIP2Q9H939 334 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 PKD2L1Q9P0L9 805 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 CNTNAP5Q8WYK1 1306 aa17.88■□□□□ 0.45
ACTB-202ENST00000414620 C17orf102A2RUQ5 167 aa17.87■□□□□ 0.45
ACTB-202ENST00000414620 THPOP40225 353 aa17.87■□□□□ 0.45
ACTB-202ENST00000414620 CNKSR3Q6P9H4 555 aa17.87■□□□□ 0.45
ACTB-202ENST00000414620 TRAF7Q6Q0C0 670 aa17.87■□□□□ 0.45
ACTB-202ENST00000414620 APOA5Q6Q788 366 aa17.87■□□□□ 0.45
ACTB-202ENST00000414620 SYNE3Q6ZMZ3 975 aa17.87■□□□□ 0.45
ACTB-202ENST00000414620 NLRX1Q86UT6 975 aa17.87■□□□□ 0.45
ACTB-202ENST00000414620 SGMS1Q86VZ5 419 aa17.87■□□□□ 0.45
ACTB-202ENST00000414620 RASEFQ8IZ41 740 aa17.87■□□□□ 0.45
ACTB-202ENST00000414620 PHOSPHO2Q8TCD6 241 aa17.87■□□□□ 0.45
ACTB-202ENST00000414620 ATP6V0A1Q93050 837 aa17.87■□□□□ 0.45
ACTB-202ENST00000414620 GPR20Q99678 358 aa17.87■□□□□ 0.45
ACTB-202ENST00000414620 LOXHD1Q8IVV2 1947 aa17.86■□□□□ 0.45
ACTB-202ENST00000414620 TREHO43280 583 aa17.86■□□□□ 0.45
ACTB-202ENST00000414620 CXCL10P02778 98 aa17.86■□□□□ 0.45
ACTB-202ENST00000414620 MBTPS1Q14703 1052 aa17.86■□□□□ 0.45
ACTB-202ENST00000414620 SPRED2Q7Z698 418 aa17.86■□□□□ 0.45
ACTB-202ENST00000414620 BRPF3Q9ULD4 1205 aa17.86■□□□□ 0.45
ACTB-202ENST00000414620 PRUNE2Q8WUY3 3088 aa17.86■□□□□ 0.45
ACTB-202ENST00000414620 TCF20Q9UGU0 1960 aaKnown RBP17.86■□□□□ 0.45
ACTB-202ENST00000414620 EPOPA6NHQ4 379 aa17.85■□□□□ 0.45
ACTB-202ENST00000414620 KIF28PB7ZC32 967 aa17.85■□□□□ 0.45
ACTB-202ENST00000414620 TLL1O43897 1013 aa17.85■□□□□ 0.45
ACTB-202ENST00000414620 PARNO95453 639 aaKnown RBP17.85■□□□□ 0.45
ACTB-202ENST00000414620 RTN1Q16799 776 aa17.85■□□□□ 0.45
ACTB-202ENST00000414620 WWC2Q6AWC2 1192 aa17.85■□□□□ 0.45
ACTB-202ENST00000414620 DHX32Q7L7V1 743 aaKnown RBP17.85■□□□□ 0.45
ACTB-202ENST00000414620 SERINC5Q86VE9 423 aa17.85■□□□□ 0.45
ACTB-202ENST00000414620 NLRC5Q86WI3 1866 aa17.85■□□□□ 0.45
ACTB-202ENST00000414620 PGBD1Q96JS3 809 aa17.85■□□□□ 0.45
ACTB-202ENST00000414620 RNPEPQ9H4A4 650 aa17.85■□□□□ 0.45
ACTB-202ENST00000414620 NAP1L2Q9ULW6 460 aaPredicted RBP17.85■□□□□ 0.45
ACTB-202ENST00000414620 PCDHA6Q9UN73 950 aa17.85■□□□□ 0.45
ACTB-202ENST00000414620 PCDHA8Q9Y5H6 950 aa17.85■□□□□ 0.45
ACTB-202ENST00000414620 LCHNA4D1U4 455 aa17.84■□□□□ 0.45
ACTB-202ENST00000414620 SPDYE3A6NKU9 549 aa17.84■□□□□ 0.45
ACTB-202ENST00000414620 GOLGA8AA7E2F4 631 aa17.84■□□□□ 0.45
ACTB-202ENST00000414620 GOLGA8BA8MQT2 603 aa17.84■□□□□ 0.45
ACTB-202ENST00000414620 ZBTB43O43298 467 aa17.84■□□□□ 0.45
ACTB-202ENST00000414620 ATP9AO75110 1047 aa17.84■□□□□ 0.45
ACTB-202ENST00000414620 CTSHP09668 335 aa17.84■□□□□ 0.45
ACTB-202ENST00000414620 CPA1P15085 419 aa17.84■□□□□ 0.45
ACTB-202ENST00000414620 EXOSC10Q01780 885 aaKnown RBP17.84■□□□□ 0.45
ACTB-202ENST00000414620 TAP1Q03518 808 aa17.84■□□□□ 0.45
ACTB-202ENST00000414620 FAM117BQ6P1L5 589 aa17.84■□□□□ 0.45
ACTB-202ENST00000414620 XRRA1Q6P2D8 792 aa17.84■□□□□ 0.45
ACTB-202ENST00000414620 ARNTL2Q8WYA1 636 aa17.84■□□□□ 0.45
ACTB-202ENST00000414620 USP26Q9BXU7 913 aa17.84■□□□□ 0.45
ACTB-202ENST00000414620 SETD4Q9NVD3 440 aa17.84■□□□□ 0.45
ACTB-202ENST00000414620 RBM28Q9NW13 759 aaKnown RBP17.84■□□□□ 0.45
ACTB-202ENST00000414620 KLF18A0A0U1RQI7 1052 aa17.83■□□□□ 0.44
ACTB-202ENST00000414620 RSPH10B2B2RC85 870 aa17.83■□□□□ 0.44
ACTB-202ENST00000414620 LGR5O75473 907 aa17.83■□□□□ 0.44
ACTB-202ENST00000414620 RSPH10BP0C881 870 aa17.83■□□□□ 0.44
ACTB-202ENST00000414620 KCNA2P16389 499 aa17.83■□□□□ 0.44
ACTB-202ENST00000414620 ITGB5P18084 799 aa17.83■□□□□ 0.44
ACTB-202ENST00000414620 TCF7P36402 384 aaPredicted RBP17.83■□□□□ 0.44
ACTB-202ENST00000414620 NAPAP54920 295 aa17.83■□□□□ 0.44
ACTB-202ENST00000414620 TYW1BQ6NUM6 668 aa17.83■□□□□ 0.44
ACTB-202ENST00000414620 GPRASP2Q96D09 838 aa17.83■□□□□ 0.44
ACTB-202ENST00000414620 SENP7Q9BQF6 1050 aa17.83■□□□□ 0.44
ACTB-202ENST00000414620 ZBED2Q9BTP6 218 aa17.83■□□□□ 0.44
ACTB-202ENST00000414620 THEGQ9P2T0 379 aa17.83■□□□□ 0.44
ACTB-202ENST00000414620 ZNF215Q9UL58 517 aaPredicted RBP17.83■□□□□ 0.44
ACTB-202ENST00000414620 CHD9Q3L8U1 2897 aa17.82■□□□□ 0.44
ACTB-202ENST00000414620 PRRC2BQ5JSZ5 2229 aaKnown RBP17.82■□□□□ 0.44
ACTB-202ENST00000414620 MARK3P27448 753 aa17.82■□□□□ 0.44
ACTB-202ENST00000414620 HOXC8P31273 242 aa17.82■□□□□ 0.44
ACTB-202ENST00000414620 ARHGAP4P98171 946 aa17.82■□□□□ 0.44
ACTB-202ENST00000414620 MTMR1Q13613 665 aa17.82■□□□□ 0.44
ACTB-202ENST00000414620 IKBKEQ14164 716 aa17.82■□□□□ 0.44
ACTB-202ENST00000414620 KRT40Q6A162 431 aa17.82■□□□□ 0.44
ACTB-202ENST00000414620 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.82■□□□□ 0.442e-30■■■□□ 14.8
ACTB-202ENST00000414620 CCDC136Q96JN2 1154 aa17.82■□□□□ 0.44
ACTB-202ENST00000414620 OSBPL7Q9BZF2 842 aa17.82■□□□□ 0.44
ACTB-202ENST00000414620 UBIAD1Q9Y5Z9 338 aa17.82■□□□□ 0.44
ACTB-202ENST00000414620 ABHD14A-ACY1A0A1B0GW23 586 aa17.81■□□□□ 0.44
ACTB-202ENST00000414620 CDC27P30260 824 aa17.81■□□□□ 0.44
ACTB-202ENST00000414620 FGD1P98174 961 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms