RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 HMGCRP04035 888 aa17.35■□□□□ 0.37
LINC00116-201ENST00000414416 CLCN1P35523 988 aa17.35■□□□□ 0.37
LINC00116-201ENST00000414416 DTHD1Q6ZMT9 781 aa17.35■□□□□ 0.37
LINC00116-201ENST00000414416 SLC5A5Q92911 643 aa17.35■□□□□ 0.37
LINC00116-201ENST00000414416 NAP1L5Q96NT1 182 aaPredicted RBP17.35■□□□□ 0.37
LINC00116-201ENST00000414416 NRBP1Q9UHY1 535 aa17.35■□□□□ 0.37
LINC00116-201ENST00000414416 RBM47A0AV96 593 aaKnown RBP17.35■□□□□ 0.37
LINC00116-201ENST00000414416 ATP9AO75110 1047 aa17.35■□□□□ 0.37
LINC00116-201ENST00000414416 ZNF865P0CJ78 1059 aaPredicted RBP17.35■□□□□ 0.37
LINC00116-201ENST00000414416 TXNP10599 105 aaKnown RBP17.35■□□□□ 0.37
LINC00116-201ENST00000414416 LRCH2Q5VUJ6 765 aa17.35■□□□□ 0.37
LINC00116-201ENST00000414416 FERMT2Q96AC1 680 aa17.35■□□□□ 0.37
LINC00116-201ENST00000414416 RIT2Q99578 217 aa17.35■□□□□ 0.37
LINC00116-201ENST00000414416 SENP7Q9BQF6 1050 aa17.35■□□□□ 0.37
LINC00116-201ENST00000414416 TTC12Q9H892 705 aaPredicted RBP17.35■□□□□ 0.37
LINC00116-201ENST00000414416 RRAGDQ9NQL2 400 aaPredicted RBP17.35■□□□□ 0.37
LINC00116-201ENST00000414416 PCDHA12Q9UN75 941 aa17.35■□□□□ 0.37
LINC00116-201ENST00000414416 GAS7O60861 476 aa17.34■□□□□ 0.37
LINC00116-201ENST00000414416 ARIH2O95376 493 aa17.34■□□□□ 0.37
LINC00116-201ENST00000414416 KCNA2P16389 499 aa17.34■□□□□ 0.37
LINC00116-201ENST00000414416 GRK4P32298 578 aa17.34■□□□□ 0.37
LINC00116-201ENST00000414416 ADCYAP1R1P41586 468 aa17.34■□□□□ 0.37
LINC00116-201ENST00000414416 ME1P48163 572 aa17.34■□□□□ 0.37
LINC00116-201ENST00000414416 SP2Q02086 613 aa17.34■□□□□ 0.37
LINC00116-201ENST00000414416 ITGB3BPQ13352 177 aaPredicted RBP17.34■□□□□ 0.37
LINC00116-201ENST00000414416 LY6KQ17RY6 165 aa17.34■□□□□ 0.37
LINC00116-201ENST00000414416 CCDC144BQ3MJ40 725 aa17.34■□□□□ 0.37
LINC00116-201ENST00000414416 CTU1Q7Z7A3 348 aaKnown RBP17.34■□□□□ 0.37
LINC00116-201ENST00000414416 KRI1Q8N9T8 703 aaKnown RBP17.34■□□□□ 0.37
LINC00116-201ENST00000414416 SDF4Q9BRK5 362 aa17.34■□□□□ 0.37
LINC00116-201ENST00000414416 TBC1D22BQ9NU19 505 aa17.34■□□□□ 0.37
LINC00116-201ENST00000414416 DDX41Q9UJV9 622 aaKnown RBP17.34■□□□□ 0.37
LINC00116-201ENST00000414416 VWA3AA6NCI4 1184 aa17.33■□□□□ 0.37
LINC00116-201ENST00000414416 CYBAP13498 195 aa17.33■□□□□ 0.37
LINC00116-201ENST00000414416 LIG1P18858 919 aa17.33■□□□□ 0.37
LINC00116-201ENST00000414416 UBA1P22314 1058 aaKnown RBP17.33■□□□□ 0.37
LINC00116-201ENST00000414416 TECP42680 631 aa17.33■□□□□ 0.37
LINC00116-201ENST00000414416 CACNB2Q08289 660 aaPredicted RBP17.33■□□□□ 0.37
LINC00116-201ENST00000414416 TRIM32Q13049 653 aa17.33■□□□□ 0.37
LINC00116-201ENST00000414416 NEDD9Q14511 834 aa17.33■□□□□ 0.37
LINC00116-201ENST00000414416 TMEM266Q2M3C6 531 aa17.33■□□□□ 0.37
LINC00116-201ENST00000414416 CCDC62Q6P9F0 684 aa17.33■□□□□ 0.37
LINC00116-201ENST00000414416 GIMAP8Q8ND71 665 aaPredicted RBP17.33■□□□□ 0.37
LINC00116-201ENST00000414416 FBXO2Q9UK22 296 aaPredicted RBP17.33■□□□□ 0.37
LINC00116-201ENST00000414416 SRPRBQ9Y5M8 271 aaKnown RBP17.33■□□□□ 0.37
LINC00116-201ENST00000414416 PSMD10O75832 226 aa17.33■□□□□ 0.36
LINC00116-201ENST00000414416 PRKAR2AP13861 404 aaKnown RBP17.33■□□□□ 0.36
LINC00116-201ENST00000414416 IL17AQ16552 155 aa17.33■□□□□ 0.36
LINC00116-201ENST00000414416 IQSEC1Q6DN90 963 aa17.33■□□□□ 0.36
LINC00116-201ENST00000414416 TEKT3Q9BXF9 490 aa17.33■□□□□ 0.36
LINC00116-201ENST00000414416 NFASCO94856 1347 aa17.32■□□□□ 0.36
LINC00116-201ENST00000414416 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.32■□□□□ 0.36
LINC00116-201ENST00000414416 DHX15O43143 795 aaKnown RBP17.32■□□□□ 0.36
LINC00116-201ENST00000414416 FXR2P51116 673 aaKnown RBP eCLIP17.32■□□□□ 0.36
LINC00116-201ENST00000414416 FAM184BQ9ULE4 1060 aa17.32■□□□□ 0.36
LINC00116-201ENST00000414416 PCDHA7Q9UN72 937 aa17.32■□□□□ 0.36
LINC00116-201ENST00000414416 HTTP42858 3142 aa17.32■□□□□ 0.36
LINC00116-201ENST00000414416 SYCE3A1L190 88 aa17.32■□□□□ 0.36
LINC00116-201ENST00000414416 DDX39AO00148 427 aaKnown RBP17.32■□□□□ 0.36
LINC00116-201ENST00000414416 GGPS1O95749 300 aa17.32■□□□□ 0.36
LINC00116-201ENST00000414416 TNFAIP2Q03169 654 aa17.32■□□□□ 0.36
LINC00116-201ENST00000414416 DUSP28Q4G0W2 176 aa17.32■□□□□ 0.36
LINC00116-201ENST00000414416 CYFIP1Q7L576 1253 aa17.32■□□□□ 0.36
LINC00116-201ENST00000414416 TRPV1Q8NER1 839 aa17.32■□□□□ 0.36
LINC00116-201ENST00000414416 CLIC6Q96NY7 704 aa17.32■□□□□ 0.36
LINC00116-201ENST00000414416 RAB34Q9BZG1 259 aa17.32■□□□□ 0.36
LINC00116-201ENST00000414416 TCEAL9Q9UHQ7 104 aa17.32■□□□□ 0.36
LINC00116-201ENST00000414416 VAV3Q9UKW4 847 aa17.32■□□□□ 0.36
LINC00116-201ENST00000414416 CENPFP49454 3210 aa17.31■□□□□ 0.36
LINC00116-201ENST00000414416 FSD2A1L4K1 749 aa17.31■□□□□ 0.36
LINC00116-201ENST00000414416 GOLGA6L4A6NEF3 574 aa17.31■□□□□ 0.36
LINC00116-201ENST00000414416 CUTAO60888 179 aa17.31■□□□□ 0.36
LINC00116-201ENST00000414416 INHAP05111 366 aa17.31■□□□□ 0.36
LINC00116-201ENST00000414416 AKR1A1P14550 325 aa17.31■□□□□ 0.36
LINC00116-201ENST00000414416 SMPD1P17405 629 aa17.31■□□□□ 0.36
LINC00116-201ENST00000414416 LONP1P36776 959 aaKnown RBP17.31■□□□□ 0.36
LINC00116-201ENST00000414416 GRIN1Q05586 938 aa17.31■□□□□ 0.36
LINC00116-201ENST00000414416 PPP2R5CQ13362 524 aa17.31■□□□□ 0.36
LINC00116-201ENST00000414416 TMEM63BQ5T3F8 832 aa17.31■□□□□ 0.36
LINC00116-201ENST00000414416 BCAS3Q9H6U6 928 aa17.31■□□□□ 0.36
LINC00116-201ENST00000414416 MLXIPQ9HAP2 919 aa17.31■□□□□ 0.36
LINC00116-201ENST00000414416 JPH1Q9HDC5 661 aaPredicted RBP17.31■□□□□ 0.36
LINC00116-201ENST00000414416 NKRFO15226 690 aaKnown RBP eCLIP17.3■□□□□ 0.36
LINC00116-201ENST00000414416 SORBS3O60504 671 aa17.3■□□□□ 0.36
LINC00116-201ENST00000414416 CNGA1P29973 690 aa17.3■□□□□ 0.36
LINC00116-201ENST00000414416 SPIRE1Q08AE8 756 aa17.3■□□□□ 0.36
LINC00116-201ENST00000414416 PDIA5Q14554 519 aa17.3■□□□□ 0.36
LINC00116-201ENST00000414416 CELF3Q5SZQ8 465 aaKnown RBP17.3■□□□□ 0.36
LINC00116-201ENST00000414416 MAP3K21Q5TCX8 1036 aa17.3■□□□□ 0.36
LINC00116-201ENST00000414416 METTL7BQ6UX53 244 aa17.3■□□□□ 0.36
LINC00116-201ENST00000414416 DHX37Q8IY37 1157 aaKnown RBP17.3■□□□□ 0.36
LINC00116-201ENST00000414416 IGSF22Q8N9C0 903 aa17.3■□□□□ 0.36
LINC00116-201ENST00000414416 COPS5Q92905 334 aa17.3■□□□□ 0.36
LINC00116-201ENST00000414416 CSRNP2Q9H175 543 aa17.3■□□□□ 0.36
LINC00116-201ENST00000414416 UNC45AQ9H3U1 944 aa17.3■□□□□ 0.36
LINC00116-201ENST00000414416 SLC9A2Q9UBY0 812 aa17.3■□□□□ 0.36
LINC00116-201ENST00000414416 POTEMA6NI47 508 aa17.3■□□□□ 0.36
LINC00116-201ENST00000414416 CHMP2AO43633 222 aa17.3■□□□□ 0.36
LINC00116-201ENST00000414416 FARP2O94887 1054 aaPredicted RBP17.3■□□□□ 0.36
LINC00116-201ENST00000414416 ZNF445P59923 1031 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms