RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ME3Q16798 604 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 ZC3H12BQ5HYM0 836 aaKnown RBP10.43□□□□□ -0.74
SNHG3-201ENST00000413987 SYT10Q6XYQ8 523 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 RASGRP2Q7LDG7 609 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 UBR7Q8N806 425 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 IQUBQ8NA54 791 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 MNS1Q8NEH6 495 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 FBXO18Q8NFZ0 1043 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 SMAD5Q99717 465 aaKnown RBP10.43□□□□□ -0.74
SNHG3-201ENST00000413987 ARMT1Q9H993 441 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 OBP2AQ9NY56 170 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 SEL1LQ9UBV2 794 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 CFAP45Q9UL16 551 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 PLAAQ9Y263 795 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 EFCAB8A8MWE9 144 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 F8W031 263 aaPredicted RBP10.43□□□□□ -0.74
SNHG3-201ENST00000413987 MBD4O95243 580 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 HSPD1P10809 573 aaKnown RBP10.43□□□□□ -0.74
SNHG3-201ENST00000413987 HAND2P61296 217 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 DYNLL1P63167 89 aaKnown RBP10.43□□□□□ -0.74
SNHG3-201ENST00000413987 GTF2IP78347 998 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 MECOMQ03112 1051 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 C21orf62-AS1Q17RA5 79 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 SWSAP1Q6NVH7 229 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 C1orf122Q6ZSJ8 110 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 CDC37L1Q7L3B6 337 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 EEPD1Q7L9B9 569 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 LCORLQ8N3X6 602 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 NEK11Q8NG66 645 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 WDR66Q8TBY9 1149 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 FBF1Q8TES7 1133 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 MAP4K1Q92918 833 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 EXOC4Q96A65 974 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 ZC3H12CQ9C0D7 883 aaKnown RBP10.43□□□□□ -0.74
SNHG3-201ENST00000413987 TSPYL2Q9H2G4 693 aaPredicted RBP10.43□□□□□ -0.74
SNHG3-201ENST00000413987 DLEC1Q9Y238 1755 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 RFX7Q2KHR2 1363 aa10.43□□□□□ -0.74
SNHG3-201ENST00000413987 SMIM22K7EJ46 135 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 MPHOSPH10O00566 681 aaKnown RBP10.42□□□□□ -0.74
SNHG3-201ENST00000413987 POLR3GO15318 223 aaPredicted RBP10.42□□□□□ -0.74
SNHG3-201ENST00000413987 DTNBO60941 627 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 PGRP06401 933 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 IVLP07476 585 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 MYCLP1P12525 358 aaPredicted RBP10.42□□□□□ -0.74
SNHG3-201ENST00000413987 CYP7A1P22680 504 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 CCT2P78371 535 aaKnown RBP10.42□□□□□ -0.74
SNHG3-201ENST00000413987 ARID5BQ14865 1188 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 SLMAPQ14BN4 828 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 TRIM22Q8IYM9 498 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 SNED1Q8TER0 1413 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 PPP1R13BQ96KQ4 1090 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 DMRTB1Q96MA1 342 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 TCEANC2Q96MN5 208 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 RMI1Q9H9A7 625 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 SMYD2Q9NRG4 433 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 ZNF277Q9NRM2 450 aaPredicted RBP10.42□□□□□ -0.74
SNHG3-201ENST00000413987 HELLSQ9NRZ9 838 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 RRP15Q9Y3B9 282 aaKnown RBP10.42□□□□□ -0.74
SNHG3-201ENST00000413987 MSRB2Q9Y3D2 182 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 V9GY48 417 aaPredicted RBP10.42□□□□□ -0.74
SNHG3-201ENST00000413987 KIF13BQ9NQT8 1826 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 H0Y3Z8 333 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 K7ENM7 598 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 TOR1BO14657 336 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 FAM13AO94988 1023 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 GTF2A1P52655 376 aaPredicted RBP10.42□□□□□ -0.74
SNHG3-201ENST00000413987 APBA1Q02410 837 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 IFRD2Q12894 506 aaPredicted RBP10.42□□□□□ -0.74
SNHG3-201ENST00000413987 STK3Q13188 491 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 NECTIN1Q15223 517 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 E4F1Q66K89 784 aaPredicted RBP10.42□□□□□ -0.74
SNHG3-201ENST00000413987 CREB3L3Q68CJ9 461 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 CEP57L1Q8IYX8 460 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 HOOK2Q96ED9 719 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 ZSCAN16Q9H4T2 348 aaPredicted RBP10.42□□□□□ -0.74
SNHG3-201ENST00000413987 CAAP1Q9H8G2 361 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 RABL2AQ9UBK7 228 aaPredicted RBP10.42□□□□□ -0.74
SNHG3-201ENST00000413987 COL4A5P29400 1685 aa10.42□□□□□ -0.74
SNHG3-201ENST00000413987 C9IYK1 514 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 SLC27A2O14975 620 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 GPR182O15218 404 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 ASMTLO95671 621 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 IL1R1P14778 569 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 CAP2P40123 477 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 ETF1P62495 437 aaKnown RBP10.41□□□□□ -0.74
SNHG3-201ENST00000413987 EVX2Q03828 476 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 ST3GAL1Q11201 340 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 NR6A1Q15406 480 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 MFSD14BQ5SR56 506 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 TOGARAM2Q6ZUX3 1019 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 TEX9Q8N6V9 391 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 SDR42E1Q8WUS8 393 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 SMARCE1Q969G3 411 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 ATP6V1E2Q96A05 226 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 AIDAQ96BJ3 306 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 NSUN4Q96CB9 384 aaKnown RBP10.41□□□□□ -0.74
SNHG3-201ENST00000413987 CCDC113Q9H0I3 377 aa10.41□□□□□ -0.74
SNHG3-201ENST00000413987 AATFQ9NY61 560 aaKnown RBP eCLIP10.41□□□□□ -0.742e-14■□□□□ 11.3
SNHG3-201ENST00000413987 UTP6Q9NYH9 597 aaKnown RBP10.41□□□□□ -0.74
SNHG3-201ENST00000413987 TPCN1Q9ULQ1 816 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms