RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 SUGP1Q8IWZ8 645 aaKnown RBP16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 CEP95Q96GE4 821 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 STAT3P40763 770 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 MDH1P40925 334 aaKnown RBP16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 KLHL30Q0D2K2 578 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 COASYQ13057 564 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 REXO1Q8N1G1 1221 aaKnown RBP16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 UBLCP1Q8WVY7 318 aaPredicted RBP16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 ATP6V1G3Q96LB4 118 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 INPP4AQ96PE3 977 aaPredicted RBP16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 AJAP1Q9UKB5 411 aaPredicted RBP16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 PJA2O43164 708 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 SLC16A2P36021 539 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 PRPHP41219 470 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 ITGB3BPQ13352 177 aaPredicted RBP16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 SBK1Q52WX2 424 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 UBAP2Q5T6F2 1119 aaKnown RBP16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 KDM7AQ6ZMT4 941 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 RAD54LQ92698 747 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 EYA3Q99504 573 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 C6orf50Q9HD87 102 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 AMACRQ9UHK6 382 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 BCS1LQ9Y276 419 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 TMCO5BA8MYB1 307 aa16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 PDHBP11177 359 aa16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 ECHS1P30084 290 aa16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 MKRN4PQ13434 485 aaPredicted RBP16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 NAB2Q15742 525 aa16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 MEI1Q5TIA1 1274 aa16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 KRT25Q7Z3Z0 450 aa16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 NR2E1Q9Y466 385 aa16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 MYH14Q7Z406 1995 aaKnown RBP16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 SMIM23A6NLE4 172 aa16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 OPLAHO14841 1288 aa16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 DAPK3O43293 454 aa16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 MYL1P05976 194 aa16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 PCP11498 1178 aaKnown RBP16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 TAL1P17542 331 aaPredicted RBP16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 CASP5P51878 434 aa16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 PTK2Q05397 1052 aa16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 ODF2Q5BJF6 829 aa16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 SLC30A10Q6XR72 485 aa16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 CCDC84Q86UT8 332 aaPredicted RBP16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 CNPY4Q8N129 248 aa16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 PRPF38AQ8NAV1 312 aaKnown RBP16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 UHMK1Q8TAS1 419 aaKnown RBP16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 NCAPGQ9BPX3 1015 aa16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 COL4A3BPQ9Y5P4 624 aa16.03■□□□□ 0.16
SEMA3F-202ENST00000413852 PHF20L1A8MW92 1017 aa16.02■□□□□ 0.16
SEMA3F-202ENST00000413852 CDC37Q16543 378 aaPredicted RBP16.02■□□□□ 0.16
SEMA3F-202ENST00000413852 KIRREL3Q8IZU9 778 aa16.02■□□□□ 0.16
SEMA3F-202ENST00000413852 DAGLBQ8NCG7 672 aa16.02■□□□□ 0.16
SEMA3F-202ENST00000413852 AK8Q96MA6 479 aa16.02■□□□□ 0.16
SEMA3F-202ENST00000413852 MTMR9Q96QG7 549 aa16.02■□□□□ 0.16
SEMA3F-202ENST00000413852 ZNF335Q9H4Z2 1342 aaPredicted RBP16.02■□□□□ 0.16
SEMA3F-202ENST00000413852 MARCH6O60337 910 aa16.02■□□□□ 0.16
SEMA3F-202ENST00000413852 TTBK2Q6IQ55 1244 aa16.02■□□□□ 0.16
SEMA3F-202ENST00000413852 ZNF571Q7Z3V5 609 aaPredicted RBP16.02■□□□□ 0.16
SEMA3F-202ENST00000413852 CCDC13Q8IYE1 715 aa16.02■□□□□ 0.16
SEMA3F-202ENST00000413852 MYOCDQ8IZQ8 938 aa16.02■□□□□ 0.16
SEMA3F-202ENST00000413852 GUF1Q8N442 669 aaKnown RBP16.02■□□□□ 0.16
SEMA3F-202ENST00000413852 USP38Q8NB14 1042 aa16.02■□□□□ 0.16
SEMA3F-202ENST00000413852 PANK4Q9NVE7 773 aa16.02■□□□□ 0.16
SEMA3F-202ENST00000413852 SEC63Q9UGP8 760 aaKnown RBP16.02■□□□□ 0.16
SEMA3F-202ENST00000413852 FBXL5Q9UKA1 691 aa16.02■□□□□ 0.16
SEMA3F-202ENST00000413852 ATP6V0A2Q9Y487 856 aa16.02■□□□□ 0.16
SEMA3F-202ENST00000413852 MEIS1O00470 390 aa16.02■□□□□ 0.15
SEMA3F-202ENST00000413852 LDHBP07195 334 aaKnown RBP16.02■□□□□ 0.15
SEMA3F-202ENST00000413852 CDK8P49336 464 aa16.02■□□□□ 0.15
SEMA3F-202ENST00000413852 NBPF9Q3BBW0 867 aa16.02■□□□□ 0.15
SEMA3F-202ENST00000413852 ANKIB1Q9P2G1 1089 aa16.02■□□□□ 0.15
SEMA3F-202ENST00000413852 NOVA2Q9UNW9 492 aaKnown RBP16.02■□□□□ 0.15
SEMA3F-202ENST00000413852 DNM1LO00429 736 aa16.01■□□□□ 0.15
SEMA3F-202ENST00000413852 SERPING1P05155 500 aa16.01■□□□□ 0.15
SEMA3F-202ENST00000413852 CTNNA1P35221 906 aaKnown RBP16.01■□□□□ 0.15
SEMA3F-202ENST00000413852 ITIH3Q06033 890 aa16.01■□□□□ 0.15
SEMA3F-202ENST00000413852 NFIXQ14938 502 aa16.01■□□□□ 0.15
SEMA3F-202ENST00000413852 DNAJC19Q96DA6 116 aa16.01■□□□□ 0.15
SEMA3F-202ENST00000413852 CYFIP2Q96F07 1278 aa16.01■□□□□ 0.15
SEMA3F-202ENST00000413852 CUEDC2Q9H467 287 aa16.01■□□□□ 0.15
SEMA3F-202ENST00000413852 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.01■□□□□ 0.15
SEMA3F-202ENST00000413852 AMIGO3Q86WK7 504 aa16.01■□□□□ 0.15
SEMA3F-202ENST00000413852 TRIM51Q9BSJ1 452 aa16.01■□□□□ 0.15
SEMA3F-202ENST00000413852 KIAA1024Q9UPX6 916 aa16.01■□□□□ 0.15
SEMA3F-202ENST00000413852 CASZ1Q86V15 1759 aa16.01■□□□□ 0.15
SEMA3F-202ENST00000413852 POTEB3A0JP26 581 aa16■□□□□ 0.15
SEMA3F-202ENST00000413852 POTECB2RU33 542 aa16■□□□□ 0.15
SEMA3F-202ENST00000413852 LAD1O00515 517 aa16■□□□□ 0.15
SEMA3F-202ENST00000413852 GNAQP50148 359 aa16■□□□□ 0.15
SEMA3F-202ENST00000413852 ZNF844Q08AG5 666 aa16■□□□□ 0.15
SEMA3F-202ENST00000413852 HERC4Q5GLZ8 1057 aaPredicted RBP16■□□□□ 0.15
SEMA3F-202ENST00000413852 POTEBQ6S5H4 581 aa16■□□□□ 0.15
SEMA3F-202ENST00000413852 B4GALNT4Q76KP1 1039 aa16■□□□□ 0.15
SEMA3F-202ENST00000413852 LINC00116Q8NCU8 138 aa16■□□□□ 0.15
SEMA3F-202ENST00000413852 MYCBPQ99417 103 aaPredicted RBP16■□□□□ 0.15
SEMA3F-202ENST00000413852 HAUS2Q9NVX0 235 aa16■□□□□ 0.15
SEMA3F-202ENST00000413852 DDX20Q9UHI6 824 aaKnown RBP16■□□□□ 0.15
SEMA3F-202ENST00000413852 TTI1O43156 1089 aa16■□□□□ 0.15
SEMA3F-202ENST00000413852 SLC18A3Q16572 532 aa16■□□□□ 0.15
SEMA3F-202ENST00000413852 SPTY2D1Q68D10 685 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms