RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 GSPT2Q8IYD1 628 aaKnown RBP18.41■□□□□ 0.54
LIMS2-208ENST00000410011 GLIS3Q8NEA6 775 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 RBM17Q96I25 401 aaKnown RBP18.41■□□□□ 0.54
LIMS2-208ENST00000410011 TRERF1Q96PN7 1200 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 TANGO6Q9C0B7 1094 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 PCDHGC5Q9Y5F6 944 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 MYH10P35580 1976 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 PITPNM2Q9BZ72 1349 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 ATAD5Q96QE3 1844 aa18.41■□□□□ 0.54
LIMS2-208ENST00000410011 ZBTB5O15062 677 aa18.4■□□□□ 0.54
LIMS2-208ENST00000410011 AKR1B1P15121 316 aa18.4■□□□□ 0.54
LIMS2-208ENST00000410011 SLC1A4P43007 532 aa18.4■□□□□ 0.54
LIMS2-208ENST00000410011 USP11P51784 963 aa18.4■□□□□ 0.54
LIMS2-208ENST00000410011 CCDC40Q4G0X9 1142 aa18.4■□□□□ 0.54
LIMS2-208ENST00000410011 GDAP1L1Q96MZ0 367 aa18.4■□□□□ 0.54
LIMS2-208ENST00000410011 GDF3Q9NR23 364 aa18.4■□□□□ 0.54
LIMS2-208ENST00000410011 CYP3A7-CYP3A51PA0A087WV96 503 aa18.4■□□□□ 0.54
LIMS2-208ENST00000410011 CES2O00748 559 aa18.4■□□□□ 0.54
LIMS2-208ENST00000410011 PPP1R11O60927 126 aaPredicted RBP18.4■□□□□ 0.54
LIMS2-208ENST00000410011 CYP3A7P24462 503 aa18.4■□□□□ 0.54
LIMS2-208ENST00000410011 HOXA10P31260 410 aaPredicted RBP18.4■□□□□ 0.54
LIMS2-208ENST00000410011 C10orf76Q5T2E6 689 aa18.4■□□□□ 0.54
LIMS2-208ENST00000410011 DRC1Q96MC2 740 aa18.4■□□□□ 0.54
LIMS2-208ENST00000410011 KCTD10Q9H3F6 313 aa18.4■□□□□ 0.54
LIMS2-208ENST00000410011 LY75O60449 1722 aa18.4■□□□□ 0.54
LIMS2-208ENST00000410011 APBA1Q02410 837 aa18.39■□□□□ 0.53
LIMS2-208ENST00000410011 C8orf74Q6P047 294 aa18.39■□□□□ 0.53
LIMS2-208ENST00000410011 FOXR1Q6PIV2 292 aa18.39■□□□□ 0.53
LIMS2-208ENST00000410011 MOXD1Q6UVY6 613 aa18.39■□□□□ 0.53
LIMS2-208ENST00000410011 IFT20Q8IY31 132 aa18.39■□□□□ 0.53
LIMS2-208ENST00000410011 LRRC47Q8N1G4 583 aaKnown RBP18.39■□□□□ 0.53
LIMS2-208ENST00000410011 TBC1D16Q8TBP0 767 aa18.39■□□□□ 0.53
LIMS2-208ENST00000410011 MBOAT7Q96N66 472 aa18.39■□□□□ 0.53
LIMS2-208ENST00000410011 PSTPIP2Q9H939 334 aa18.39■□□□□ 0.53
LIMS2-208ENST00000410011 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.39■□□□□ 0.53
LIMS2-208ENST00000410011 TDRD12Q587J7 1177 aaKnown RBP18.39■□□□□ 0.53
LIMS2-208ENST00000410011 KCNMB3Q9NPA1 279 aa18.39■□□□□ 0.53
LIMS2-208ENST00000410011 GPCPD1Q9NPB8 672 aa18.39■□□□□ 0.53
LIMS2-208ENST00000410011 MAGEA9P43362 315 aa18.38■□□□□ 0.53
LIMS2-208ENST00000410011 CORO7P57737 925 aa18.38■□□□□ 0.53
LIMS2-208ENST00000410011 DNAJC21Q5F1R6 531 aaKnown RBP18.38■□□□□ 0.53
LIMS2-208ENST00000410011 MEI1Q5TIA1 1274 aa18.38■□□□□ 0.53
LIMS2-208ENST00000410011 MREGQ8N565 214 aa18.38■□□□□ 0.53
LIMS2-208ENST00000410011 EIF1ADQ8N9N8 165 aaKnown RBP18.38■□□□□ 0.53
LIMS2-208ENST00000410011 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.38■□□□□ 0.538e-7■■■■■ 58.5
LIMS2-208ENST00000410011 RBM12Q9NTZ6 932 aaKnown RBP18.38■□□□□ 0.53
LIMS2-208ENST00000410011 POLLQ9UGP5 575 aa18.38■□□□□ 0.53
LIMS2-208ENST00000410011 SERPINB13Q9UIV8 391 aa18.38■□□□□ 0.53
LIMS2-208ENST00000410011 ATP8B3O60423 1300 aa18.38■□□□□ 0.53
LIMS2-208ENST00000410011 PLA2G4BP0C869 781 aa18.38■□□□□ 0.53
LIMS2-208ENST00000410011 CXCR5P32302 372 aa18.38■□□□□ 0.53
LIMS2-208ENST00000410011 IRAK1P51617 712 aa18.38■□□□□ 0.53
LIMS2-208ENST00000410011 POLR2FP61218 127 aaKnown RBP18.38■□□□□ 0.53
LIMS2-208ENST00000410011 SKOR1P84550 965 aa18.38■□□□□ 0.53
LIMS2-208ENST00000410011 DPP8Q6V1X1 898 aaPredicted RBP18.38■□□□□ 0.53
LIMS2-208ENST00000410011 TMC4Q7Z404 712 aa18.38■□□□□ 0.53
LIMS2-208ENST00000410011 C1orf131Q8NDD1 294 aaKnown RBP18.38■□□□□ 0.53
LIMS2-208ENST00000410011 SCFD1Q8WVM8 642 aa18.38■□□□□ 0.53
LIMS2-208ENST00000410011 LSM14BQ9BX40 385 aaKnown RBP18.38■□□□□ 0.53
LIMS2-208ENST00000410011 FAM107BQ9H098 131 aa18.38■□□□□ 0.53
LIMS2-208ENST00000410011 NLRC4Q9NPP4 1024 aa18.38■□□□□ 0.53
LIMS2-208ENST00000410011 EMILIN3Q9NT22 766 aa18.38■□□□□ 0.53
LIMS2-208ENST00000410011 MARCH6O60337 910 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 ATP2B2Q01814 1243 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 UBE2SQ16763 222 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 EMC10Q5UCC4 262 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 ANKRD13CQ8N6S4 541 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 CRAMP1Q96RY5 1269 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 PLCB1Q9NQ66 1216 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 RSPH14Q9UHP6 348 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 BZW2Q9Y6E2 419 aaKnown RBP18.37■□□□□ 0.53
LIMS2-208ENST00000410011 TRIM66O15016 1216 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 NCK2O43639 380 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 HSF2BPO75031 334 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 CYP11B2P19099 503 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 ANXA13P27216 316 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 SLC7A5Q01650 507 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 MCTP2Q6DN12 878 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 C10orf67Q8IYJ2 551 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 SLFN12Q8IYM2 578 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 ZBTB9Q96C00 473 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 GANQ9H2C0 597 aa18.37■□□□□ 0.53
LIMS2-208ENST00000410011 BUB1O43683 1085 aa18.36■□□□□ 0.53
LIMS2-208ENST00000410011 PALMO75781 387 aa18.36■□□□□ 0.53
LIMS2-208ENST00000410011 CD302Q8IX05 232 aa18.36■□□□□ 0.53
LIMS2-208ENST00000410011 IQCKQ8N0W5 287 aa18.36■□□□□ 0.53
LIMS2-208ENST00000410011 TBC1D5Q92609 795 aa18.36■□□□□ 0.53
LIMS2-208ENST00000410011 KIAA1024Q9UPX6 916 aa18.36■□□□□ 0.53
LIMS2-208ENST00000410011 TRAF3IP3Q9Y228 551 aa18.36■□□□□ 0.53
LIMS2-208ENST00000410011 STK24Q9Y6E0 443 aa18.36■□□□□ 0.53
LIMS2-208ENST00000410011 CETN3O15182 167 aa18.35■□□□□ 0.53
LIMS2-208ENST00000410011 KLRC1P26715 233 aa18.35■□□□□ 0.53
LIMS2-208ENST00000410011 SHMT1P34896 483 aa18.35■□□□□ 0.53
LIMS2-208ENST00000410011 MATR3P43243 847 aaKnown RBP eCLIP18.35■□□□□ 0.53
LIMS2-208ENST00000410011 PAK2Q13177 524 aa18.35■□□□□ 0.53
LIMS2-208ENST00000410011 ADAM9Q13443 819 aa18.35■□□□□ 0.53
LIMS2-208ENST00000410011 HERC4Q5GLZ8 1057 aaPredicted RBP18.35■□□□□ 0.53
LIMS2-208ENST00000410011 FRMD5Q7Z6J6 570 aa18.35■□□□□ 0.53
LIMS2-208ENST00000410011 INPP4AQ96PE3 977 aaPredicted RBP18.35■□□□□ 0.53
LIMS2-208ENST00000410011 CAPS2Q9BXY5 557 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms