RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 PPTC7Q8NI37 304 aa12.42□□□□□ -0.42
CCDC148-203ENST00000409889 PHF7Q9BWX1 381 aaPredicted RBP12.42□□□□□ -0.42
CCDC148-203ENST00000409889 OSBPL7Q9BZF2 842 aa12.42□□□□□ -0.42
CCDC148-203ENST00000409889 NACAP1Q9BZK3 213 aa12.42□□□□□ -0.42
CCDC148-203ENST00000409889 NAPBQ9H115 298 aa12.42□□□□□ -0.42
CCDC148-203ENST00000409889 GPCPD1Q9NPB8 672 aa12.42□□□□□ -0.42
CCDC148-203ENST00000409889 PNMA2Q9UL42 364 aa12.42□□□□□ -0.42
CCDC148-203ENST00000409889 USP15Q9Y4E8 981 aaPredicted RBP12.42□□□□□ -0.42
CCDC148-203ENST00000409889 MYH6P13533 1939 aa12.42□□□□□ -0.42
CCDC148-203ENST00000409889 KMT2BQ9UMN6 2715 aaPredicted RBP12.42□□□□□ -0.42
CCDC148-203ENST00000409889 PLXNA4Q9HCM2 1894 aa12.42□□□□□ -0.42
CCDC148-203ENST00000409889 WDR19Q8NEZ3 1342 aa12.41□□□□□ -0.42
CCDC148-203ENST00000409889 RNF113AO15541 343 aaKnown RBP12.41□□□□□ -0.42
CCDC148-203ENST00000409889 HMMRO75330 724 aa12.41□□□□□ -0.42
CCDC148-203ENST00000409889 RGS20O76081 388 aa12.41□□□□□ -0.42
CCDC148-203ENST00000409889 ICAM3P32942 547 aa12.41□□□□□ -0.42
CCDC148-203ENST00000409889 CAMK1Q14012 370 aa12.41□□□□□ -0.42
CCDC148-203ENST00000409889 PTPN21Q16825 1174 aa12.41□□□□□ -0.42
CCDC148-203ENST00000409889 ADGRD2Q7Z7M1 963 aa12.41□□□□□ -0.42
CCDC148-203ENST00000409889 EFHBQ8N7U6 833 aa12.41□□□□□ -0.42
CCDC148-203ENST00000409889 APBB2Q92870 758 aa12.41□□□□□ -0.42
CCDC148-203ENST00000409889 CLP1Q92989 425 aaKnown RBP12.41□□□□□ -0.42
CCDC148-203ENST00000409889 RC3H2Q9HBD1 1191 aaKnown RBP12.41□□□□□ -0.42
CCDC148-203ENST00000409889 DDX41Q9UJV9 622 aaKnown RBP12.41□□□□□ -0.42
CCDC148-203ENST00000409889 BARX2Q9UMQ3 279 aaPredicted RBP12.41□□□□□ -0.42
CCDC148-203ENST00000409889 GLP2RO95838 553 aa12.4□□□□□ -0.42
CCDC148-203ENST00000409889 LAMC2Q13753 1193 aa12.4□□□□□ -0.42
CCDC148-203ENST00000409889 STXBP2Q15833 593 aa12.4□□□□□ -0.42
CCDC148-203ENST00000409889 USH1GQ495M9 461 aa12.4□□□□□ -0.42
CCDC148-203ENST00000409889 ATP6V0A1Q93050 837 aa12.4□□□□□ -0.42
CCDC148-203ENST00000409889 RIPOR3Q96MK2 946 aa12.4□□□□□ -0.42
CCDC148-203ENST00000409889 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.4□□□□□ -0.42
CCDC148-203ENST00000409889 MRVI1Q9Y6F6 885 aa12.4□□□□□ -0.42
CCDC148-203ENST00000409889 C17orf102A2RUQ5 167 aa12.39□□□□□ -0.43
CCDC148-203ENST00000409889 RANBP6O60518 1105 aaKnown RBP12.39□□□□□ -0.43
CCDC148-203ENST00000409889 CAND2O75155 1236 aa12.39□□□□□ -0.43
CCDC148-203ENST00000409889 ZFYP08048 801 aaPredicted RBP12.39□□□□□ -0.43
CCDC148-203ENST00000409889 HOXD8P13378 290 aaPredicted RBP12.39□□□□□ -0.43
CCDC148-203ENST00000409889 DNAJB1P25685 340 aa12.39□□□□□ -0.43
CCDC148-203ENST00000409889 NRIP1P48552 1158 aa12.39□□□□□ -0.43
CCDC148-203ENST00000409889 NOVP48745 357 aa12.39□□□□□ -0.43
CCDC148-203ENST00000409889 CTDSPL2Q05D32 466 aa12.39□□□□□ -0.43
CCDC148-203ENST00000409889 BTG3Q14201 252 aaPredicted RBP12.39□□□□□ -0.43
CCDC148-203ENST00000409889 ZBTB33Q86T24 672 aa12.39□□□□□ -0.43
CCDC148-203ENST00000409889 SIRT2Q8IXJ6 389 aa12.39□□□□□ -0.43
CCDC148-203ENST00000409889 ADSSL1Q8N142 457 aa12.39□□□□□ -0.43
CCDC148-203ENST00000409889 NSUN6Q8TEA1 469 aaKnown RBP12.39□□□□□ -0.43
CCDC148-203ENST00000409889 NKD2Q969F2 451 aaPredicted RBP12.39□□□□□ -0.43
CCDC148-203ENST00000409889 TAAR1Q96RJ0 339 aa12.39□□□□□ -0.43
CCDC148-203ENST00000409889 PLVAPQ9BX97 442 aa12.39□□□□□ -0.43
CCDC148-203ENST00000409889 PLAGL2Q9UPG8 496 aa12.39□□□□□ -0.43
CCDC148-203ENST00000409889 TTC3P53804 2025 aa12.38□□□□□ -0.43
CCDC148-203ENST00000409889 NCOR2Q9Y618 2525 aa12.38□□□□□ -0.43
CCDC148-203ENST00000409889 TREHO43280 583 aa12.38□□□□□ -0.43
CCDC148-203ENST00000409889 SORBS3O60504 671 aa12.38□□□□□ -0.43
CCDC148-203ENST00000409889 HSDL1Q3SXM5 330 aa12.38□□□□□ -0.43
CCDC148-203ENST00000409889 FRMD5Q7Z6J6 570 aa12.38□□□□□ -0.43
CCDC148-203ENST00000409889 RBM23Q86U06 439 aaKnown RBP12.38□□□□□ -0.43
CCDC148-203ENST00000409889 RGS22Q8NE09 1264 aa12.38□□□□□ -0.43
CCDC148-203ENST00000409889 PANK1Q8TE04 598 aa12.38□□□□□ -0.43
CCDC148-203ENST00000409889 TBC1D5Q92609 795 aa12.38□□□□□ -0.43
CCDC148-203ENST00000409889 P2RX5Q93086 422 aa12.38□□□□□ -0.43
CCDC148-203ENST00000409889 IWS1Q96ST2 819 aa12.38□□□□□ -0.43
CCDC148-203ENST00000409889 RMDN3Q96TC7 470 aa12.38□□□□□ -0.43
CCDC148-203ENST00000409889 SEC62Q99442 399 aaKnown RBP12.38□□□□□ -0.43
CCDC148-203ENST00000409889 COL20A1Q9P218 1284 aa12.38□□□□□ -0.43
CCDC148-203ENST00000409889 MED19A0JLT2 244 aaPredicted RBP12.37□□□□□ -0.43
CCDC148-203ENST00000409889 PPFIA4O75335 1185 aa12.37□□□□□ -0.43
CCDC148-203ENST00000409889 ITGB1P05556 798 aa12.37□□□□□ -0.43
CCDC148-203ENST00000409889 SMIM10L2AP0DMW4 78 aa12.37□□□□□ -0.43
CCDC148-203ENST00000409889 SMIM10L2BP0DMW5 78 aa12.37□□□□□ -0.43
CCDC148-203ENST00000409889 PDHBP11177 359 aa12.37□□□□□ -0.43
CCDC148-203ENST00000409889 TOP1P11387 765 aaKnown RBP12.37□□□□□ -0.43
CCDC148-203ENST00000409889 ATF7P17544 494 aaPredicted RBP12.37□□□□□ -0.43
CCDC148-203ENST00000409889 EIF2AK2P19525 551 aaKnown RBP12.37□□□□□ -0.43
CCDC148-203ENST00000409889 HOXC8P31273 242 aa12.37□□□□□ -0.43
CCDC148-203ENST00000409889 MYSM1Q5VVJ2 828 aa12.37□□□□□ -0.43
CCDC148-203ENST00000409889 MCTP2Q6DN12 878 aa12.37□□□□□ -0.43
CCDC148-203ENST00000409889 TMEM105Q8N8V8 129 aa12.37□□□□□ -0.43
CCDC148-203ENST00000409889 SYTL5Q8TDW5 730 aaPredicted RBP12.37□□□□□ -0.43
CCDC148-203ENST00000409889 ZNF689Q96CS4 500 aaPredicted RBP12.37□□□□□ -0.43
CCDC148-203ENST00000409889 SPATA33Q96N06 139 aa12.37□□□□□ -0.43
CCDC148-203ENST00000409889 TMEM47Q9BQJ4 181 aa12.37□□□□□ -0.43
CCDC148-203ENST00000409889 C16orf70Q9BSU1 422 aa12.37□□□□□ -0.43
CCDC148-203ENST00000409889 ECHDC1Q9NTX5 307 aa12.37□□□□□ -0.43
CCDC148-203ENST00000409889 DOCK5Q9H7D0 1870 aa12.37□□□□□ -0.43
CCDC148-203ENST00000409889 KAT6AQ92794 2004 aa12.37□□□□□ -0.43
CCDC148-203ENST00000409889 EIF3JO75822 258 aaKnown RBP12.36□□□□□ -0.43
CCDC148-203ENST00000409889 KRT37O76014 449 aa12.36□□□□□ -0.43
CCDC148-203ENST00000409889 ZNF543Q08ER8 600 aa12.36□□□□□ -0.43
CCDC148-203ENST00000409889 ARHGEF16Q5VV41 709 aa12.36□□□□□ -0.43
CCDC148-203ENST00000409889 SPPL3Q8TCT6 385 aa12.36□□□□□ -0.43
CCDC148-203ENST00000409889 SUSD6Q92537 303 aa12.36□□□□□ -0.43
CCDC148-203ENST00000409889 LRRCC1Q9C099 1032 aa12.36□□□□□ -0.43
CCDC148-203ENST00000409889 RNPEPQ9H4A4 650 aa12.36□□□□□ -0.43
CCDC148-203ENST00000409889 MYO10Q9HD67 2058 aa12.36□□□□□ -0.43
CCDC148-203ENST00000409889 EP300Q09472 2414 aaPredicted RBP12.36□□□□□ -0.43
CCDC148-203ENST00000409889 H3BRB1 525 aa12.35□□□□□ -0.43
CCDC148-203ENST00000409889 SMARCA5O60264 1052 aaPredicted RBP12.35□□□□□ -0.43
CCDC148-203ENST00000409889 GGPS1O95749 300 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms