RNA–Protein interactions for RNA: ENST00000409772.5

PDE6D-202, Transcript of phosphodiesterase 6D, humanhuman

TSL 3 BASIC

Gene PDE6D, Length 672 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-202ENST00000409772 CCDC155Q8N6L0 562 aa19.52■□□□□ 0.72
PDE6D-202ENST00000409772 RETREG2Q8NC44 543 aa19.52■□□□□ 0.72
PDE6D-202ENST00000409772 WASF1Q92558 559 aa19.52■□□□□ 0.72
PDE6D-202ENST00000409772 KAT2BQ92831 832 aa19.52■□□□□ 0.72
PDE6D-202ENST00000409772 UPF2Q9HAU5 1272 aaKnown RBP19.52■□□□□ 0.72
PDE6D-202ENST00000409772 ZNF215Q9UL58 517 aaPredicted RBP19.52■□□□□ 0.72
PDE6D-202ENST00000409772 TPCN1Q9ULQ1 816 aa19.52■□□□□ 0.72
PDE6D-202ENST00000409772 GTF3C3Q9Y5Q9 886 aa19.52■□□□□ 0.72
PDE6D-202ENST00000409772 H3BRB1 525 aa19.51■□□□□ 0.71
PDE6D-202ENST00000409772 CYP3A4P08684 503 aa19.51■□□□□ 0.71
PDE6D-202ENST00000409772 ARHGAP4P98171 946 aa19.51■□□□□ 0.71
PDE6D-202ENST00000409772 SEMA3FQ13275 785 aa19.51■□□□□ 0.71
PDE6D-202ENST00000409772 PTGISQ16647 500 aa19.51■□□□□ 0.71
PDE6D-202ENST00000409772 GPR153Q6NV75 609 aa19.51■□□□□ 0.71
PDE6D-202ENST00000409772 SEPT1Q8WYJ6 367 aa19.51■□□□□ 0.71
PDE6D-202ENST00000409772 SDF4Q9BRK5 362 aa19.51■□□□□ 0.71
PDE6D-202ENST00000409772 PPP1R12CQ9BZL4 782 aa19.51■□□□□ 0.71
PDE6D-202ENST00000409772 TUT1Q9H6E5 874 aaKnown RBP19.51■□□□□ 0.71
PDE6D-202ENST00000409772 KCNH7Q9NS40 1196 aa19.51■□□□□ 0.71
PDE6D-202ENST00000409772 TRMT13Q9NUP7 481 aaKnown RBP19.51■□□□□ 0.71
PDE6D-202ENST00000409772 HAS3O00219 553 aa19.5■□□□□ 0.71
PDE6D-202ENST00000409772 MEIS1O00470 390 aa19.5■□□□□ 0.71
PDE6D-202ENST00000409772 SORBS3O60504 671 aa19.5■□□□□ 0.71
PDE6D-202ENST00000409772 SCRN1Q12765 414 aa19.5■□□□□ 0.71
PDE6D-202ENST00000409772 C8orf34Q49A92 452 aa19.5■□□□□ 0.71
PDE6D-202ENST00000409772 TNPO1Q92973 898 aaKnown RBP19.5■□□□□ 0.71
PDE6D-202ENST00000409772 GPR20Q99678 358 aa19.5■□□□□ 0.71
PDE6D-202ENST00000409772 C16orf70Q9BSU1 422 aa19.5■□□□□ 0.71
PDE6D-202ENST00000409772 ALG1Q9BT22 464 aa19.5■□□□□ 0.71
PDE6D-202ENST00000409772 NOC4LQ9BVI4 516 aaKnown RBP19.5■□□□□ 0.71
PDE6D-202ENST00000409772 TMEM260Q9NX78 707 aa19.5■□□□□ 0.71
PDE6D-202ENST00000409772 VPS54Q9P1Q0 977 aa19.5■□□□□ 0.71
PDE6D-202ENST00000409772 GTF2IRD1Q9UHL9 959 aa19.5■□□□□ 0.71
PDE6D-202ENST00000409772 PITPNM1O00562 1244 aa19.49■□□□□ 0.71
PDE6D-202ENST00000409772 ATP9AO75110 1047 aa19.49■□□□□ 0.71
PDE6D-202ENST00000409772 LGALS2P05162 132 aa19.49■□□□□ 0.71
PDE6D-202ENST00000409772 ZNF286BP0CG31 522 aa19.49■□□□□ 0.71
PDE6D-202ENST00000409772 GNAT1P11488 350 aa19.49■□□□□ 0.71
PDE6D-202ENST00000409772 KCNA2P16389 499 aa19.49■□□□□ 0.71
PDE6D-202ENST00000409772 CYP2C18P33260 490 aa19.49■□□□□ 0.71
PDE6D-202ENST00000409772 SHHQ15465 462 aa19.49■□□□□ 0.71
PDE6D-202ENST00000409772 CAGE1Q8TC20 777 aa19.49■□□□□ 0.71
PDE6D-202ENST00000409772 PGBD1Q96JS3 809 aa19.49■□□□□ 0.71
PDE6D-202ENST00000409772 MTIF3Q9H2K0 278 aaKnown RBP19.49■□□□□ 0.71
PDE6D-202ENST00000409772 HDAC6Q9UBN7 1215 aa19.49■□□□□ 0.71
PDE6D-202ENST00000409772 PCDHA4Q9UN74 947 aa19.49■□□□□ 0.71
PDE6D-202ENST00000409772 NFASCO94856 1347 aa19.49■□□□□ 0.71
PDE6D-202ENST00000409772 PPFIA3O75145 1194 aa19.48■□□□□ 0.71
PDE6D-202ENST00000409772 PARNO95453 639 aaKnown RBP19.48■□□□□ 0.71
PDE6D-202ENST00000409772 PFKMP08237 780 aa19.48■□□□□ 0.71
PDE6D-202ENST00000409772 USP11P51784 963 aa19.48■□□□□ 0.71
PDE6D-202ENST00000409772 SETQ01105 290 aaPredicted RBP19.48■□□□□ 0.71
PDE6D-202ENST00000409772 PSRC1Q6PGN9 363 aaPredicted RBP19.48■□□□□ 0.71
PDE6D-202ENST00000409772 JPH1Q9HDC5 661 aaPredicted RBP19.48■□□□□ 0.71
PDE6D-202ENST00000409772 IL23AQ9NPF7 189 aa19.48■□□□□ 0.71
PDE6D-202ENST00000409772 SLC9A2Q9UBY0 812 aa19.48■□□□□ 0.71
PDE6D-202ENST00000409772 LTBP2Q14767 1821 aa19.48■□□□□ 0.71
PDE6D-202ENST00000409772 STK36Q9NRP7 1315 aa19.48■□□□□ 0.71
PDE6D-202ENST00000409772 CYP2C9P11712 490 aa19.47■□□□□ 0.71
PDE6D-202ENST00000409772 CSF2RAP15509 400 aa19.47■□□□□ 0.71
PDE6D-202ENST00000409772 RFC2P35250 354 aa19.47■□□□□ 0.71
PDE6D-202ENST00000409772 PLA2G4DQ86XP0 818 aa19.47■□□□□ 0.71
PDE6D-202ENST00000409772 BLIDQ8IZY5 108 aa19.47■□□□□ 0.71
PDE6D-202ENST00000409772 SMARCAD1Q9H4L7 1026 aa19.47■□□□□ 0.71
PDE6D-202ENST00000409772 BCAS3Q9H6U6 928 aa19.47■□□□□ 0.71
PDE6D-202ENST00000409772 TBC1D22BQ9NU19 505 aa19.47■□□□□ 0.71
PDE6D-202ENST00000409772 LIMCH1Q9UPQ0 1083 aa19.47■□□□□ 0.71
PDE6D-202ENST00000409772 FGBP02675 491 aa19.46■□□□□ 0.71
PDE6D-202ENST00000409772 TCF7P36402 384 aaPredicted RBP19.46■□□□□ 0.71
PDE6D-202ENST00000409772 SP4Q02446 784 aa19.46■□□□□ 0.71
PDE6D-202ENST00000409772 PTK7Q13308 1070 aa19.46■□□□□ 0.71
PDE6D-202ENST00000409772 UTP14CQ5TAP6 766 aaKnown RBP19.46■□□□□ 0.71
PDE6D-202ENST00000409772 GDF6Q6KF10 455 aaPredicted RBP19.46■□□□□ 0.71
PDE6D-202ENST00000409772 DAGLBQ8NCG7 672 aa19.46■□□□□ 0.71
PDE6D-202ENST00000409772 CYP2W1Q8TAV3 490 aa19.46■□□□□ 0.71
PDE6D-202ENST00000409772 AFAP1L1Q8TED9 768 aa19.46■□□□□ 0.71
PDE6D-202ENST00000409772 CRYGNQ8WXF5 182 aa19.46■□□□□ 0.71
PDE6D-202ENST00000409772 RNPC3Q96LT9 517 aaKnown RBP19.46■□□□□ 0.71
PDE6D-202ENST00000409772 ZSCAN31Q96LW9 406 aaPredicted RBP19.46■□□□□ 0.71
PDE6D-202ENST00000409772 AZI2Q9H6S1 392 aa19.46■□□□□ 0.71
PDE6D-202ENST00000409772 AGO4Q9HCK5 861 aaKnown RBP19.46■□□□□ 0.71
PDE6D-202ENST00000409772 TCEAL9Q9UHQ7 104 aa19.46■□□□□ 0.71
PDE6D-202ENST00000409772 C17orf102A2RUQ5 167 aa19.45■□□□□ 0.7
PDE6D-202ENST00000409772 ARP10275 920 aa19.45■□□□□ 0.7
PDE6D-202ENST00000409772 CIITAP33076 1130 aa19.45■□□□□ 0.7
PDE6D-202ENST00000409772 RBM25P49756 843 aaKnown RBP19.45■□□□□ 0.7
PDE6D-202ENST00000409772 CCL23P55773 120 aa19.45■□□□□ 0.7
PDE6D-202ENST00000409772 ME3Q16798 604 aa19.45■□□□□ 0.7
PDE6D-202ENST00000409772 C9orf50Q5SZB4 431 aa19.45■□□□□ 0.7
PDE6D-202ENST00000409772 GLG1Q92896 1179 aa19.45■□□□□ 0.7
PDE6D-202ENST00000409772 GTF3C6Q969F1 213 aa19.45■□□□□ 0.7
PDE6D-202ENST00000409772 ERAP1Q9NZ08 941 aa19.45■□□□□ 0.7
PDE6D-202ENST00000409772 PKD2L1Q9P0L9 805 aa19.45■□□□□ 0.7
PDE6D-202ENST00000409772 ORC3Q9UBD5 711 aaPredicted RBP19.45■□□□□ 0.7
PDE6D-202ENST00000409772 IPO5O00410 1097 aaKnown RBP19.44■□□□□ 0.7
PDE6D-202ENST00000409772 TMEM240Q5SV17 173 aa19.44■□□□□ 0.7
PDE6D-202ENST00000409772 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.44■□□□□ 0.7
PDE6D-202ENST00000409772 ZNF577Q9BSK1 485 aa19.44■□□□□ 0.7
PDE6D-202ENST00000409772 BRMS1Q9HCU9 246 aa19.44■□□□□ 0.7
PDE6D-202ENST00000409772 NRCAMQ92823 1304 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms