RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 MMP3P08254 477 aa16.79■□□□□ 0.28
SUMO1-207ENST00000409498 GCFC2P16383 781 aaKnown RBP16.79■□□□□ 0.28
SUMO1-207ENST00000409498 BEX3Q00994 111 aa16.79■□□□□ 0.28
SUMO1-207ENST00000409498 SNX17Q15036 470 aa16.79■□□□□ 0.28
SUMO1-207ENST00000409498 HSDL1Q3SXM5 330 aa16.79■□□□□ 0.28
SUMO1-207ENST00000409498 AFG1LQ8WV93 481 aa16.79■□□□□ 0.28
SUMO1-207ENST00000409498 SEZ6LQ9BYH1 1024 aa16.79■□□□□ 0.28
SUMO1-207ENST00000409498 BCAS3Q9H6U6 928 aa16.79■□□□□ 0.28
SUMO1-207ENST00000409498 MLXIPQ9HAP2 919 aa16.79■□□□□ 0.28
SUMO1-207ENST00000409498 A0A1W2PQ45 241 aaPredicted RBP16.78■□□□□ 0.28
SUMO1-207ENST00000409498 A0A1W2PQY0 241 aa16.78■□□□□ 0.28
SUMO1-207ENST00000409498 PDCP20941 246 aa16.78■□□□□ 0.28
SUMO1-207ENST00000409498 FOSBP53539 338 aa16.78■□□□□ 0.28
SUMO1-207ENST00000409498 PURAQ00577 322 aaKnown RBP16.78■□□□□ 0.28
SUMO1-207ENST00000409498 ITGB3BPQ13352 177 aaPredicted RBP16.78■□□□□ 0.28
SUMO1-207ENST00000409498 PRR16Q569H4 304 aa16.78■□□□□ 0.28
SUMO1-207ENST00000409498 LARP1BQ659C4 914 aaKnown RBP16.78■□□□□ 0.28
SUMO1-207ENST00000409498 CYFIP1Q7L576 1253 aa16.78■□□□□ 0.28
SUMO1-207ENST00000409498 NOSTRINQ8IVI9 506 aa16.78■□□□□ 0.28
SUMO1-207ENST00000409498 TBC1D22BQ9NU19 505 aa16.78■□□□□ 0.28
SUMO1-207ENST00000409498 SCN10AQ9Y5Y9 1956 aa16.77■□□□□ 0.28
SUMO1-207ENST00000409498 FAM205CA6NFA0 338 aa16.77■□□□□ 0.28
SUMO1-207ENST00000409498 KIF28PB7ZC32 967 aa16.77■□□□□ 0.28
SUMO1-207ENST00000409498 TBX3O15119 743 aa16.77■□□□□ 0.28
SUMO1-207ENST00000409498 CAPN15O75808 1086 aa16.77■□□□□ 0.28
SUMO1-207ENST00000409498 TDP2O95551 362 aa16.77■□□□□ 0.28
SUMO1-207ENST00000409498 TRAPPC10P48553 1259 aa16.77■□□□□ 0.28
SUMO1-207ENST00000409498 DGKDQ16760 1214 aa16.77■□□□□ 0.28
SUMO1-207ENST00000409498 SLC39A5Q6ZMH5 540 aa16.77■□□□□ 0.28
SUMO1-207ENST00000409498 SLC43A3Q8NBI5 491 aa16.77■□□□□ 0.28
SUMO1-207ENST00000409498 GLT1D1Q96MS3 346 aa16.77■□□□□ 0.28
SUMO1-207ENST00000409498 SPATA33Q96N06 139 aa16.77■□□□□ 0.28
SUMO1-207ENST00000409498 GPR20Q99678 358 aa16.77■□□□□ 0.28
SUMO1-207ENST00000409498 SENP6Q9GZR1 1112 aaPredicted RBP16.77■□□□□ 0.28
SUMO1-207ENST00000409498 DOCK5Q9H7D0 1870 aa16.77■□□□□ 0.27
SUMO1-207ENST00000409498 IPO5O00410 1097 aaKnown RBP16.76■□□□□ 0.27
SUMO1-207ENST00000409498 MSH4O15457 936 aa16.76■□□□□ 0.27
SUMO1-207ENST00000409498 ATG7O95352 703 aa16.76■□□□□ 0.27
SUMO1-207ENST00000409498 PDIA4P13667 645 aaKnown RBP16.76■□□□□ 0.27
SUMO1-207ENST00000409498 ORC2Q13416 577 aaPredicted RBP16.76■□□□□ 0.27
SUMO1-207ENST00000409498 LETM2Q2VYF4 491 aa16.76■□□□□ 0.27
SUMO1-207ENST00000409498 ETNPPLQ8TBG4 499 aa16.76■□□□□ 0.27
SUMO1-207ENST00000409498 SLC5A5Q92911 643 aa16.76■□□□□ 0.27
SUMO1-207ENST00000409498 RIT2Q99578 217 aa16.76■□□□□ 0.27
SUMO1-207ENST00000409498 SDF4Q9BRK5 362 aa16.76■□□□□ 0.27
SUMO1-207ENST00000409498 ZNF577Q9BSK1 485 aa16.76■□□□□ 0.27
SUMO1-207ENST00000409498 MTG1Q9BT17 334 aaPredicted RBP16.76■□□□□ 0.27
SUMO1-207ENST00000409498 HTATIP2Q9BUP3 242 aa16.76■□□□□ 0.27
SUMO1-207ENST00000409498 JPH1Q9HDC5 661 aaPredicted RBP16.76■□□□□ 0.27
SUMO1-207ENST00000409498 KCNMB3Q9NPA1 279 aa16.76■□□□□ 0.27
SUMO1-207ENST00000409498 STARD7Q9NQZ5 370 aa16.76■□□□□ 0.27
SUMO1-207ENST00000409498 SLC9A2Q9UBY0 812 aa16.76■□□□□ 0.27
SUMO1-207ENST00000409498 DDX25Q9UHL0 483 aaKnown RBP16.76■□□□□ 0.27
SUMO1-207ENST00000409498 GSTTP1A0A1W2PQM5 241 aa16.75■□□□□ 0.27
SUMO1-207ENST00000409498 H3BQV1 296 aa16.75■□□□□ 0.27
SUMO1-207ENST00000409498 HAS3O00219 553 aa16.75■□□□□ 0.27
SUMO1-207ENST00000409498 MYCNP04198 464 aaPredicted RBP16.75■□□□□ 0.27
SUMO1-207ENST00000409498 CDK7P50613 346 aa16.75■□□□□ 0.27
SUMO1-207ENST00000409498 B3GNT9Q6UX72 402 aa16.75■□□□□ 0.27
SUMO1-207ENST00000409498 CXCL17Q6UXB2 119 aa16.75■□□□□ 0.27
SUMO1-207ENST00000409498 SEPT1Q8WYJ6 367 aa16.75■□□□□ 0.27
SUMO1-207ENST00000409498 KAT2BQ92831 832 aa16.75■□□□□ 0.27
SUMO1-207ENST00000409498 FAM20AQ96MK3 541 aa16.75■□□□□ 0.27
SUMO1-207ENST00000409498 C16orf70Q9BSU1 422 aa16.75■□□□□ 0.27
SUMO1-207ENST00000409498 GRIN2DO15399 1336 aa16.74■□□□□ 0.27
SUMO1-207ENST00000409498 IGKV6D-21A0A0A0MT36 114 aa16.74■□□□□ 0.27
SUMO1-207ENST00000409498 SLC37A4O43826 429 aa16.74■□□□□ 0.27
SUMO1-207ENST00000409498 CCNT1O60563 726 aaKnown RBP16.74■□□□□ 0.27
SUMO1-207ENST00000409498 PSMD10O75832 226 aa16.74■□□□□ 0.27
SUMO1-207ENST00000409498 F2P00734 622 aa16.74■□□□□ 0.27
SUMO1-207ENST00000409498 SYT1P21579 422 aa16.74■□□□□ 0.27
SUMO1-207ENST00000409498 ZNF746Q6NUN9 644 aaPredicted RBP16.74■□□□□ 0.27
SUMO1-207ENST00000409498 FERMT2Q96AC1 680 aa16.74■□□□□ 0.27
SUMO1-207ENST00000409498 TELO2Q9Y4R8 837 aa16.74■□□□□ 0.27
SUMO1-207ENST00000409498 ALPK3Q96L96 1907 aa16.74■□□□□ 0.27
SUMO1-207ENST00000409498 A0A0U1RQG5 324 aaPredicted RBP16.73■□□□□ 0.27
SUMO1-207ENST00000409498 ARVCFO00192 962 aa16.73■□□□□ 0.27
SUMO1-207ENST00000409498 NOP56O00567 594 aaKnown RBP16.73■□□□□ 0.27
SUMO1-207ENST00000409498 WNT7AO00755 349 aa16.73■□□□□ 0.27
SUMO1-207ENST00000409498 LGR5O75473 907 aa16.73■□□□□ 0.27
SUMO1-207ENST00000409498 MYL3P08590 195 aa16.73■□□□□ 0.27
SUMO1-207ENST00000409498 KRT76Q01546 638 aa16.73■□□□□ 0.27
SUMO1-207ENST00000409498 PTPN11Q06124 597 aaPredicted RBP16.73■□□□□ 0.27
SUMO1-207ENST00000409498 LRRC26Q2I0M4 334 aa16.73■□□□□ 0.27
SUMO1-207ENST00000409498 ANKRD33Q7Z3H0 272 aa16.73■□□□□ 0.27
SUMO1-207ENST00000409498 SESTD1Q86VW0 696 aa16.73■□□□□ 0.27
SUMO1-207ENST00000409498 HAS1Q92839 578 aa16.73■□□□□ 0.27
SUMO1-207ENST00000409498 TOX2Q96NM4 488 aa16.73■□□□□ 0.27
SUMO1-207ENST00000409498 KATNAL1Q9BW62 490 aa16.73■□□□□ 0.27
SUMO1-207ENST00000409498 PKD2L1Q9P0L9 805 aa16.73■□□□□ 0.27
SUMO1-207ENST00000409498 EMSYQ7Z589 1322 aa16.72■□□□□ 0.27
SUMO1-207ENST00000409498 CCNE2O96020 404 aa16.72■□□□□ 0.27
SUMO1-207ENST00000409498 LGALS2P05162 132 aa16.72■□□□□ 0.27
SUMO1-207ENST00000409498 TCF7P36402 384 aaPredicted RBP16.72■□□□□ 0.27
SUMO1-207ENST00000409498 TOB1P50616 345 aaPredicted RBP16.72■□□□□ 0.27
SUMO1-207ENST00000409498 ACTR2P61160 394 aa16.72■□□□□ 0.27
SUMO1-207ENST00000409498 ITGA7Q13683 1181 aa16.72■□□□□ 0.27
SUMO1-207ENST00000409498 GNL2Q13823 731 aaKnown RBP16.72■□□□□ 0.27
SUMO1-207ENST00000409498 NFRKBQ6P4R8 1299 aa16.72■□□□□ 0.27
SUMO1-207ENST00000409498 ABHD15Q6UXT9 468 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms