RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 PPP2R5CQ13362 524 aa17.21■□□□□ 0.35
AP1S3-204ENST00000409375 TAPT1Q6NXT6 567 aa17.21■□□□□ 0.35
AP1S3-204ENST00000409375 KATNBL1Q9H079 304 aa17.21■□□□□ 0.35
AP1S3-204ENST00000409375 JPH1Q9HDC5 661 aaPredicted RBP17.21■□□□□ 0.35
AP1S3-204ENST00000409375 FAM13BQ9NYF5 915 aa17.21■□□□□ 0.35
AP1S3-204ENST00000409375 LRWD1Q9UFC0 647 aa17.21■□□□□ 0.35
AP1S3-204ENST00000409375 DDX41Q9UJV9 622 aaKnown RBP17.21■□□□□ 0.35
AP1S3-204ENST00000409375 PCDHA7Q9UN72 937 aa17.21■□□□□ 0.35
AP1S3-204ENST00000409375 DDX49Q9Y6V7 483 aaKnown RBP17.21■□□□□ 0.35
AP1S3-204ENST00000409375 A0A1W2PQ27 194 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 A0A1W2PQ64 194 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 A0A1W2PQD8 194 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 SLC26A4O43511 780 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 GH1P01241 217 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 IGHA2P01877 340 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 AKR1A1P14550 325 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 KCNA2P16389 499 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 UBA1P22314 1058 aaKnown RBP17.2■□□□□ 0.34
AP1S3-204ENST00000409375 SFNP31947 248 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 UBA7P41226 1012 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 JAK3P52333 1124 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 CAP1Q01518 475 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 TNFAIP2Q03169 654 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 SEMA3FQ13275 785 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 PKN2Q16513 984 aaKnown RBP17.2■□□□□ 0.34
AP1S3-204ENST00000409375 CCDC144BQ3MJ40 725 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 HAUS3Q68CZ6 603 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 ZNF746Q6NUN9 644 aaPredicted RBP17.2■□□□□ 0.34
AP1S3-204ENST00000409375 CCDC62Q6P9F0 684 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 CTU1Q7Z7A3 348 aaKnown RBP17.2■□□□□ 0.34
AP1S3-204ENST00000409375 DHX37Q8IY37 1157 aaKnown RBP17.2■□□□□ 0.34
AP1S3-204ENST00000409375 SMAP1Q8IYB5 467 aaPredicted RBP17.2■□□□□ 0.34
AP1S3-204ENST00000409375 IGSF22Q8N9C0 903 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 RDM1Q8NG50 284 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 MLXIPQ9HAP2 919 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 SLC9A2Q9UBY0 812 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 PTPN22Q9Y2R2 807 aa17.2■□□□□ 0.34
AP1S3-204ENST00000409375 WDR64B1ANS9 1081 aa17.19■□□□□ 0.34
AP1S3-204ENST00000409375 PRPF40AO75400 957 aaKnown RBP17.19■□□□□ 0.34
AP1S3-204ENST00000409375 GGPS1O95749 300 aa17.19■□□□□ 0.34
AP1S3-204ENST00000409375 CYBAP13498 195 aa17.19■□□□□ 0.34
AP1S3-204ENST00000409375 ELNP15502 786 aa17.19■□□□□ 0.34
AP1S3-204ENST00000409375 MCM4P33991 863 aa17.19■□□□□ 0.34
AP1S3-204ENST00000409375 ADCYAP1R1P41586 468 aa17.19■□□□□ 0.34
AP1S3-204ENST00000409375 LBX1P52954 281 aa17.19■□□□□ 0.34
AP1S3-204ENST00000409375 UBE2HP62256 183 aa17.19■□□□□ 0.34
AP1S3-204ENST00000409375 LAMC2Q13753 1193 aa17.19■□□□□ 0.34
AP1S3-204ENST00000409375 DUSP28Q4G0W2 176 aa17.19■□□□□ 0.34
AP1S3-204ENST00000409375 KRT79Q5XKE5 535 aa17.19■□□□□ 0.34
AP1S3-204ENST00000409375 NCAPH2Q6IBW4 605 aa17.19■□□□□ 0.34
AP1S3-204ENST00000409375 METTL7BQ6UX53 244 aa17.19■□□□□ 0.34
AP1S3-204ENST00000409375 PYM1Q9BRP8 204 aaKnown RBP17.19■□□□□ 0.34
AP1S3-204ENST00000409375 CSRNP2Q9H175 543 aa17.19■□□□□ 0.34
AP1S3-204ENST00000409375 SAMM50Q9Y512 469 aa17.19■□□□□ 0.34
AP1S3-204ENST00000409375 PTCH2Q9Y6C5 1203 aa17.19■□□□□ 0.34
AP1S3-204ENST00000409375 DDX39AO00148 427 aaKnown RBP17.18■□□□□ 0.34
AP1S3-204ENST00000409375 NOP56O00567 594 aaKnown RBP17.18■□□□□ 0.34
AP1S3-204ENST00000409375 DHX15O43143 795 aaKnown RBP17.18■□□□□ 0.34
AP1S3-204ENST00000409375 CHMP2AO43633 222 aa17.18■□□□□ 0.34
AP1S3-204ENST00000409375 ATP9AO75110 1047 aa17.18■□□□□ 0.34
AP1S3-204ENST00000409375 ZNF865P0CJ78 1059 aaPredicted RBP17.18■□□□□ 0.34
AP1S3-204ENST00000409375 PRKAR2AP13861 404 aaKnown RBP17.18■□□□□ 0.34
AP1S3-204ENST00000409375 CNGA1P29973 690 aa17.18■□□□□ 0.34
AP1S3-204ENST00000409375 ITGB3BPQ13352 177 aaPredicted RBP17.18■□□□□ 0.34
AP1S3-204ENST00000409375 LY6KQ17RY6 165 aa17.18■□□□□ 0.34
AP1S3-204ENST00000409375 BRDTQ58F21 947 aaPredicted RBP17.18■□□□□ 0.34
AP1S3-204ENST00000409375 CELF3Q5SZQ8 465 aaKnown RBP17.18■□□□□ 0.34
AP1S3-204ENST00000409375 CCDC73Q6ZRK6 1079 aa17.18■□□□□ 0.34
AP1S3-204ENST00000409375 CYFIP1Q7L576 1253 aa17.18■□□□□ 0.34
AP1S3-204ENST00000409375 MIER3Q7Z3K6 550 aa17.18■□□□□ 0.34
AP1S3-204ENST00000409375 RASSF8Q8NHQ8 419 aa17.18■□□□□ 0.34
AP1S3-204ENST00000409375 NEK9Q8TD19 979 aa17.18■□□□□ 0.34
AP1S3-204ENST00000409375 CDK5RAP3Q96JB5 506 aa17.18■□□□□ 0.34
AP1S3-204ENST00000409375 PDGFCQ9NRA1 345 aa17.18■□□□□ 0.34
AP1S3-204ENST00000409375 CCDC39Q9UFE4 941 aa17.18■□□□□ 0.34
AP1S3-204ENST00000409375 VAV3Q9UKW4 847 aa17.18■□□□□ 0.34
AP1S3-204ENST00000409375 Q9Y3F1 56 aa17.18■□□□□ 0.34
AP1S3-204ENST00000409375 KDM3AQ9Y4C1 1321 aa17.18■□□□□ 0.34
AP1S3-204ENST00000409375 POTEMA6NI47 508 aa17.17■□□□□ 0.34
AP1S3-204ENST00000409375 SEPT4O43236 478 aa17.17■□□□□ 0.34
AP1S3-204ENST00000409375 MSCO60682 206 aa17.17■□□□□ 0.34
AP1S3-204ENST00000409375 DKC1O60832 514 aaKnown RBP eCLIP17.17■□□□□ 0.34
AP1S3-204ENST00000409375 FARP2O94887 1054 aaPredicted RBP17.17■□□□□ 0.34
AP1S3-204ENST00000409375 ARIH2O95376 493 aa17.17■□□□□ 0.34
AP1S3-204ENST00000409375 CMA1P23946 247 aa17.17■□□□□ 0.34
AP1S3-204ENST00000409375 CACNB2Q08289 660 aaPredicted RBP17.17■□□□□ 0.34
AP1S3-204ENST00000409375 SPIRE1Q08AE8 756 aa17.17■□□□□ 0.34
AP1S3-204ENST00000409375 PRAMEF19Q5SWL8 479 aa17.17■□□□□ 0.34
AP1S3-204ENST00000409375 AXDND1Q5T1B0 1012 aaPredicted RBP17.17■□□□□ 0.34
AP1S3-204ENST00000409375 MIS18BP1Q6P0N0 1132 aa17.17■□□□□ 0.34
AP1S3-204ENST00000409375 MRPS27Q92552 414 aaKnown RBP17.17■□□□□ 0.34
AP1S3-204ENST00000409375 EMID1Q96A84 441 aaPredicted RBP17.17■□□□□ 0.34
AP1S3-204ENST00000409375 CALML4Q96GE6 196 aa17.17■□□□□ 0.34
AP1S3-204ENST00000409375 SPATA33Q96N06 139 aa17.17■□□□□ 0.34
AP1S3-204ENST00000409375 CLIC6Q96NY7 704 aa17.17■□□□□ 0.34
AP1S3-204ENST00000409375 UIMC1Q96RL1 719 aa17.17■□□□□ 0.34
AP1S3-204ENST00000409375 AP5M1Q9H0R1 490 aa17.17■□□□□ 0.34
AP1S3-204ENST00000409375 UNC45AQ9H3U1 944 aa17.17■□□□□ 0.34
AP1S3-204ENST00000409375 SPC25Q9HBM1 224 aa17.17■□□□□ 0.34
AP1S3-204ENST00000409375 PSAPP07602 524 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms