RNA–Protein interactions for RNA: ENST00000409115.7

PTMA-202, Transcript of prothymosin alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTMA, Length 1,221 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-202ENST00000409115 LRRC47Q8N1G4 583 aaKnown RBP11.4□□□□□ -0.58
PTMA-202ENST00000409115 CCDC17Q96LX7 622 aa11.4□□□□□ -0.58
PTMA-202ENST00000409115 SLF1Q9BQI6 1058 aa11.4□□□□□ -0.58
PTMA-202ENST00000409115 PRDM12Q9H4Q4 367 aa11.4□□□□□ -0.58
PTMA-202ENST00000409115 ZNF576Q9H609 170 aa11.4□□□□□ -0.58
PTMA-202ENST00000409115 RAVER2Q9HCJ3 691 aaKnown RBP11.4□□□□□ -0.58
PTMA-202ENST00000409115 ATP8A2Q9NTI2 1148 aa11.4□□□□□ -0.58
PTMA-202ENST00000409115 CNPY2Q9Y2B0 182 aa11.4□□□□□ -0.58
PTMA-202ENST00000409115 DYRK1BQ9Y463 629 aa11.4□□□□□ -0.58
PTMA-202ENST00000409115 UMODL1Q5DID0 1318 aa11.39□□□□□ -0.59
PTMA-202ENST00000409115 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.39□□□□□ -0.59
PTMA-202ENST00000409115 RBAK-RBAKDNI3L0D1 243 aa11.39□□□□□ -0.59
PTMA-202ENST00000409115 ICMTO60725 284 aa11.39□□□□□ -0.59
PTMA-202ENST00000409115 C6orf222P0C671 652 aaPredicted RBP11.39□□□□□ -0.59
PTMA-202ENST00000409115 CSF2RAP15509 400 aa11.39□□□□□ -0.59
PTMA-202ENST00000409115 BEX3Q00994 111 aa11.39□□□□□ -0.59
PTMA-202ENST00000409115 HSP90AB4PQ58FF6 505 aa11.39□□□□□ -0.59
PTMA-202ENST00000409115 CCSAPQ6IQ19 270 aaPredicted RBP11.39□□□□□ -0.59
PTMA-202ENST00000409115 CCDC129Q6ZRS4 1044 aa11.39□□□□□ -0.59
PTMA-202ENST00000409115 C16orf59Q7L2K0 433 aa11.39□□□□□ -0.59
PTMA-202ENST00000409115 KLHDC9Q8NEP7 349 aa11.39□□□□□ -0.59
PTMA-202ENST00000409115 TIFAQ96CG3 184 aa11.39□□□□□ -0.59
PTMA-202ENST00000409115 HAUS7Q99871 368 aa11.39□□□□□ -0.59
PTMA-202ENST00000409115 TEX13BQ9BXU2 312 aa11.39□□□□□ -0.59
PTMA-202ENST00000409115 PBX4Q9BYU1 374 aa11.39□□□□□ -0.59
PTMA-202ENST00000409115 KANSL2Q9H9L4 492 aa11.39□□□□□ -0.59
PTMA-202ENST00000409115 GPAMQ9HCL2 828 aa11.39□□□□□ -0.59
PTMA-202ENST00000409115 EPB41L4AQ9HCS5 686 aaPredicted RBP11.39□□□□□ -0.59
PTMA-202ENST00000409115 HOMER2Q9NSB8 354 aa11.39□□□□□ -0.59
PTMA-202ENST00000409115 NRBP1Q9UHY1 535 aa11.39□□□□□ -0.59
PTMA-202ENST00000409115 LRFN2Q9ULH4 789 aa11.39□□□□□ -0.59
PTMA-202ENST00000409115 GPC6Q9Y625 555 aaPredicted RBP11.39□□□□□ -0.59
PTMA-202ENST00000409115 SCN10AQ9Y5Y9 1956 aa11.38□□□□□ -0.59
PTMA-202ENST00000409115 PRRC2BQ5JSZ5 2229 aaKnown RBP11.38□□□□□ -0.59
PTMA-202ENST00000409115 DNAJC25-GNG10A0A024R161 153 aa11.38□□□□□ -0.59
PTMA-202ENST00000409115 TMEM265A0A087WTH1 108 aa11.38□□□□□ -0.59
PTMA-202ENST00000409115 DCDC2CA8MYV0 355 aa11.38□□□□□ -0.59
PTMA-202ENST00000409115 PRDM1O75626 825 aa11.38□□□□□ -0.59
PTMA-202ENST00000409115 ASGR1P07306 291 aa11.38□□□□□ -0.59
PTMA-202ENST00000409115 MSX1P28360 303 aa11.38□□□□□ -0.59
PTMA-202ENST00000409115 HIF1AQ16665 826 aa11.38□□□□□ -0.59
PTMA-202ENST00000409115 TMEM240Q5SV17 173 aa11.38□□□□□ -0.59
PTMA-202ENST00000409115 TMCO4Q5TGY1 634 aa11.38□□□□□ -0.59
PTMA-202ENST00000409115 ANKRD33Q7Z3H0 272 aa11.38□□□□□ -0.59
PTMA-202ENST00000409115 AMOTL1Q8IY63 956 aa11.38□□□□□ -0.59
PTMA-202ENST00000409115 DDX11Q96FC9 970 aa11.38□□□□□ -0.59
PTMA-202ENST00000409115 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.38□□□□□ -0.593e-15■□□□□ 9.5
PTMA-202ENST00000409115 ARPP21Q9UBL0 812 aaPredicted RBP11.38□□□□□ -0.59
PTMA-202ENST00000409115 DIS3Q9Y2L1 958 aaKnown RBP11.38□□□□□ -0.59
PTMA-202ENST00000409115 KIAA1217Q5T5P2 1943 aa11.38□□□□□ -0.59
PTMA-202ENST00000409115 ASTN1O14525 1302 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 SYNGAP1Q96PV0 1343 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 NCOR1O75376 2440 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 MYH7BA7E2Y1 1941 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.37□□□□□ -0.59
PTMA-202ENST00000409115 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.37□□□□□ -0.59
PTMA-202ENST00000409115 MINDY4BA8MYZ0 360 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 LCE2BO14633 110 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 CTAGE5O15320 804 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 TIMP1P01033 207 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 ATP5JP18859 108 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 CYP2C18P33260 490 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 CNTN2Q02246 1040 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 PTSQ03393 145 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 ADGRE1Q14246 886 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 CCDC85BQ15834 202 aaPredicted RBP11.37□□□□□ -0.59
PTMA-202ENST00000409115 C11orf91Q3C1V1 193 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 CCDC144BQ3MJ40 725 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 ARSJQ5FYB0 599 aaPredicted RBP11.37□□□□□ -0.59
PTMA-202ENST00000409115 ARMCX2Q7L311 632 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 FAM126BQ8IXS8 530 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 GAS2L1Q99501 681 aaPredicted RBP11.37□□□□□ -0.59
PTMA-202ENST00000409115 KLK14Q9P0G3 267 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 FAM184BQ9ULE4 1060 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 ISY1Q9ULR0 285 aaKnown RBP11.37□□□□□ -0.59
PTMA-202ENST00000409115 ATG2AQ2TAZ0 1938 aa11.37□□□□□ -0.59
PTMA-202ENST00000409115 GSG1L2A8MUP6 293 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 F5H6K3 240 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 M0R2C6 588 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 TNFRSF10BO14763 440 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 F11P03951 625 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 CST5P28325 142 aaPredicted RBP11.36□□□□□ -0.59
PTMA-202ENST00000409115 COPB2P35606 906 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 SNAP25P60880 206 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 KLRC3Q07444 240 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 PPIGQ13427 754 aaKnown RBP eCLIP11.36□□□□□ -0.596e-9■■■■■ 32.8
PTMA-202ENST00000409115 ACVR2BQ13705 512 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 UBE3CQ15386 1083 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 TMEM63BQ5T3F8 832 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 MFSD5Q6N075 450 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 ZNF365Q70YC5 407 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 CCDC144CPQ8IYA2 1237 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 NUP133Q8WUM0 1156 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 CEP95Q96GE4 821 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 GLT1D1Q96MS3 346 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 TOX2Q96NM4 488 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 KATNBL1Q9H079 304 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 UPF3AQ9H1J1 476 aaKnown RBP11.36□□□□□ -0.59
PTMA-202ENST00000409115 NKX2-4Q9H2Z4 354 aa11.36□□□□□ -0.59
PTMA-202ENST00000409115 STIM2Q9P246 746 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms