RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 MYSM1Q5VVJ2 828 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 GDF6Q6KF10 455 aaPredicted RBP11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 TYW1BQ6NUM6 668 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 APOA5Q6Q788 366 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 OTOP2Q7RTS6 562 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 SGMS1Q86VZ5 419 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 FANCBQ8NB91 859 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 EMID1Q96A84 441 aaPredicted RBP11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 MTA3Q9BTC8 594 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 SEMA6BQ9H3T3 888 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 IL23AQ9NPF7 189 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 RTEL1Q9NZ71 1219 aa11.11□□□□□ -0.63
NIF3L1-202ENST00000409020 CCND2P30279 289 aa11.1□□□□□ -0.63
NIF3L1-202ENST00000409020 BRDTQ58F21 947 aaPredicted RBP11.1□□□□□ -0.63
NIF3L1-202ENST00000409020 ZNF697Q5TEC3 545 aa11.1□□□□□ -0.63
NIF3L1-202ENST00000409020 NFRKBQ6P4R8 1299 aa11.1□□□□□ -0.63
NIF3L1-202ENST00000409020 PPTC7Q8NI37 304 aa11.1□□□□□ -0.63
NIF3L1-202ENST00000409020 WNT8BQ93098 351 aa11.1□□□□□ -0.63
NIF3L1-202ENST00000409020 CDX2Q99626 313 aaPredicted RBP11.1□□□□□ -0.63
NIF3L1-202ENST00000409020 BACH2Q9BYV9 841 aa11.1□□□□□ -0.63
NIF3L1-202ENST00000409020 MAP3K20Q9NYL2 800 aaKnown RBP11.1□□□□□ -0.63
NIF3L1-202ENST00000409020 STXBP5LQ9Y2K9 1186 aa11.1□□□□□ -0.63
NIF3L1-202ENST00000409020 CNTNAP5Q8WYK1 1306 aa11.1□□□□□ -0.63
NIF3L1-202ENST00000409020 DNAJB2P25686 324 aa11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 CDC27P30260 824 aa11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 ZNF200P98182 395 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 FUT2Q10981 343 aa11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 TSGA10IPQ3SY00 556 aa11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 CELF3Q5SZQ8 465 aaKnown RBP11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 RNF20Q5VTR2 975 aa11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 WWC2Q6AWC2 1192 aa11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 PSRC1Q6PGN9 363 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 DHX32Q7L7V1 743 aaKnown RBP11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 DEFB128Q7Z7B8 93 aa11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 TMTC2Q8N394 836 aa11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 DHX38Q92620 1227 aaKnown RBP11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 LZTS2Q9BRK4 669 aa11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 ALG1Q9BT22 464 aa11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 PBX4Q9BYU1 374 aa11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 FAM217BQ9NTX9 383 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 SEC63Q9UGP8 760 aaKnown RBP11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 SNX14Q9Y5W7 946 aa11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 SCN5AQ14524 2016 aa11.09□□□□□ -0.63
NIF3L1-202ENST00000409020 KLF18A0A0U1RQI7 1052 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 PIK3CDO00329 1044 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 ADAMTS3O15072 1205 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 KPNA6O60684 536 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 F2P00734 622 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 CALM1P0DP23 149 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 CALM2P0DP24 149 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 CALM3P0DP25 149 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 SMARCA1P28370 1054 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 PSEN2P49810 448 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 LAMC2Q13753 1193 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 PTGISQ16647 500 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 DGKDQ16760 1214 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 HEATR3Q7Z4Q2 680 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 SMARCC2Q8TAQ2 1214 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 MYLIPQ8WY64 445 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 KCNB2Q92953 911 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 PGBD1Q96JS3 809 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 SPATA33Q96N06 139 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 INPP4AQ96PE3 977 aaPredicted RBP11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 SEZ6LQ9BYH1 1024 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 HDAC6Q9UBN7 1215 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 HAS3O00219 553 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 MAFGO15525 162 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 ZBTB43O43298 467 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 PPFIA3O75145 1194 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 FGBP02675 491 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 SUPT20HL2P0C7V6 817 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 XRCC6P12956 609 aaKnown RBP eCLIP11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 HOXD8P13378 290 aaPredicted RBP11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 CASTP20810 708 aaKnown RBP11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 HSPA4P34932 840 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 GNAQP50148 359 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 RABGGTBP53611 331 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 APOBRQ0VD83 1088 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 MFSD10Q14728 455 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 GPNMBQ14956 572 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 GRIN2CQ14957 1233 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 KIAA0753Q2KHM9 967 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 CYFIP1Q7L576 1253 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 SAMD3Q8N6K7 520 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 HERVK_113Q902F9 699 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 JAKMIP1Q96N16 626 aaKnown RBP11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 C16orf70Q9BSU1 422 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 PSTPIP2Q9H939 334 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 GTF2IRD1Q9UHL9 959 aa11.08□□□□□ -0.64
NIF3L1-202ENST00000409020 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 TTC36A6NLP5 189 aa11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 SPATA31C2B4DYI2 1134 aa11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 ATP9AO75110 1047 aa11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 IQCF3P0C7M6 154 aa11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 MYOGP15173 224 aa11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 ADD1P35611 737 aaKnown RBP11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 MRE11P49959 708 aa11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 SP4Q02446 784 aa11.07□□□□□ -0.64
NIF3L1-202ENST00000409020 TRAF1Q13077 416 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms