RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 GPR20Q99678 358 aa25.88■■□□□ 1.73
KDELR3-202ENST00000409006 TUT1Q9H6E5 874 aaKnown RBP25.88■■□□□ 1.73
KDELR3-202ENST00000409006 FUT2Q10981 343 aa25.87■■□□□ 1.73
KDELR3-202ENST00000409006 ZNF618Q5T7W0 954 aa25.87■■□□□ 1.73
KDELR3-202ENST00000409006 TYW1BQ6NUM6 668 aa25.87■■□□□ 1.73
KDELR3-202ENST00000409006 HEATR3Q7Z4Q2 680 aa25.87■■□□□ 1.73
KDELR3-202ENST00000409006 COL25A1Q9BXS0 654 aaPredicted RBP25.87■■□□□ 1.73
KDELR3-202ENST00000409006 CHD7Q9P2D1 2997 aa25.86■■□□□ 1.73
KDELR3-202ENST00000409006 NOP56O00567 594 aaKnown RBP25.86■■□□□ 1.73
KDELR3-202ENST00000409006 ATP9AO75110 1047 aa25.86■■□□□ 1.73
KDELR3-202ENST00000409006 CPA1P15085 419 aa25.86■■□□□ 1.73
KDELR3-202ENST00000409006 MBTPS1Q14703 1052 aa25.86■■□□□ 1.73
KDELR3-202ENST00000409006 PPP2R2DQ66LE6 453 aa25.86■■□□□ 1.73
KDELR3-202ENST00000409006 WWC2Q6AWC2 1192 aa25.86■■□□□ 1.73
KDELR3-202ENST00000409006 XRRA1Q6P2D8 792 aa25.86■■□□□ 1.73
KDELR3-202ENST00000409006 SYNE3Q6ZMZ3 975 aa25.86■■□□□ 1.73
KDELR3-202ENST00000409006 TRIM50Q86XT4 487 aa25.86■■□□□ 1.73
KDELR3-202ENST00000409006 CCDC136Q96JN2 1154 aa25.86■■□□□ 1.73
KDELR3-202ENST00000409006 SLC9A7Q96T83 725 aa25.86■■□□□ 1.73
KDELR3-202ENST00000409006 GAS2L1Q99501 681 aaPredicted RBP25.86■■□□□ 1.73
KDELR3-202ENST00000409006 FAM217BQ9NTX9 383 aaPredicted RBP25.86■■□□□ 1.73
KDELR3-202ENST00000409006 CXCL10P02778 98 aa25.85■■□□□ 1.73
KDELR3-202ENST00000409006 SMIM10L2AP0DMW4 78 aa25.85■■□□□ 1.73
KDELR3-202ENST00000409006 SMIM10L2BP0DMW5 78 aa25.85■■□□□ 1.73
KDELR3-202ENST00000409006 ITGB5P18084 799 aa25.85■■□□□ 1.73
KDELR3-202ENST00000409006 HOXC8P31273 242 aa25.85■■□□□ 1.73
KDELR3-202ENST00000409006 SP4Q02446 784 aa25.85■■□□□ 1.73
KDELR3-202ENST00000409006 TMCO2Q7Z6W1 182 aaPredicted RBP25.85■■□□□ 1.73
KDELR3-202ENST00000409006 SENP7Q9BQF6 1050 aa25.85■■□□□ 1.73
KDELR3-202ENST00000409006 RNPEPQ9H4A4 650 aa25.85■■□□□ 1.73
KDELR3-202ENST00000409006 ZBTB43O43298 467 aa25.84■■□□□ 1.73
KDELR3-202ENST00000409006 ARHGEF15O94989 841 aa25.84■■□□□ 1.73
KDELR3-202ENST00000409006 CA3P07451 260 aa25.84■■□□□ 1.73
KDELR3-202ENST00000409006 RTN1Q16799 776 aa25.84■■□□□ 1.73
KDELR3-202ENST00000409006 MICAL3Q7RTP6 2002 aa25.84■■□□□ 1.73
KDELR3-202ENST00000409006 NLRX1Q86UT6 975 aa25.84■■□□□ 1.73
KDELR3-202ENST00000409006 SERINC5Q86VE9 423 aa25.84■■□□□ 1.73
KDELR3-202ENST00000409006 HERC6Q8IVU3 1022 aa25.84■■□□□ 1.73
KDELR3-202ENST00000409006 PHOSPHO2Q8TCD6 241 aa25.84■■□□□ 1.73
KDELR3-202ENST00000409006 PPM1EQ8WY54 764 aa25.84■■□□□ 1.73
KDELR3-202ENST00000409006 KCNB2Q92953 911 aa25.84■■□□□ 1.73
KDELR3-202ENST00000409006 USP26Q9BXU7 913 aa25.84■■□□□ 1.73
KDELR3-202ENST00000409006 PRDM6Q9NQX0 595 aa25.84■■□□□ 1.73
KDELR3-202ENST00000409006 RBM28Q9NW13 759 aaKnown RBP25.84■■□□□ 1.73
KDELR3-202ENST00000409006 PCDHA6Q9UN73 950 aa25.84■■□□□ 1.73
KDELR3-202ENST00000409006 PCDHA8Q9Y5H6 950 aa25.84■■□□□ 1.73
KDELR3-202ENST00000409006 KLF18A0A0U1RQI7 1052 aa25.83■■□□□ 1.73
KDELR3-202ENST00000409006 C17orf102A2RUQ5 167 aa25.83■■□□□ 1.73
KDELR3-202ENST00000409006 TREHO43280 583 aa25.83■■□□□ 1.73
KDELR3-202ENST00000409006 BAIAP3O94812 1187 aa25.83■■□□□ 1.73
KDELR3-202ENST00000409006 KCNA2P16389 499 aa25.83■■□□□ 1.73
KDELR3-202ENST00000409006 CDC27P30260 824 aa25.83■■□□□ 1.73
KDELR3-202ENST00000409006 WDR5P61964 334 aaKnown RBP25.83■■□□□ 1.73
KDELR3-202ENST00000409006 UTP14CQ5TAP6 766 aaKnown RBP25.83■■□□□ 1.73
KDELR3-202ENST00000409006 UBIAD1Q9Y5Z9 338 aa25.83■■□□□ 1.73
KDELR3-202ENST00000409006 V9GY48 417 aaPredicted RBP25.83■■□□□ 1.73
KDELR3-202ENST00000409006 IGFBP4P22692 258 aa25.82■■□□□ 1.72
KDELR3-202ENST00000409006 DEFB103AP81534 67 aa25.82■■□□□ 1.72
KDELR3-202ENST00000409006 KRT32Q14532 448 aa25.82■■□□□ 1.72
KDELR3-202ENST00000409006 CNKSR3Q6P9H4 555 aa25.82■■□□□ 1.72
KDELR3-202ENST00000409006 ATP6V0A1Q93050 837 aa25.82■■□□□ 1.72
KDELR3-202ENST00000409006 GPRASP2Q96D09 838 aa25.82■■□□□ 1.72
KDELR3-202ENST00000409006 CERS4Q9HA82 394 aa25.82■■□□□ 1.72
KDELR3-202ENST00000409006 SETD4Q9NVD3 440 aa25.82■■□□□ 1.72
KDELR3-202ENST00000409006 PKD2L1Q9P0L9 805 aa25.82■■□□□ 1.72
KDELR3-202ENST00000409006 SPDYE3A6NKU9 549 aa25.81■■□□□ 1.72
KDELR3-202ENST00000409006 GOLGA8AA7E2F4 631 aa25.81■■□□□ 1.72
KDELR3-202ENST00000409006 GOLGA8BA8MQT2 603 aa25.81■■□□□ 1.72
KDELR3-202ENST00000409006 RFXAPO00287 272 aa25.81■■□□□ 1.72
KDELR3-202ENST00000409006 PARNO95453 639 aaKnown RBP25.81■■□□□ 1.72
KDELR3-202ENST00000409006 THPOP40225 353 aa25.81■■□□□ 1.72
KDELR3-202ENST00000409006 PGBD1Q96JS3 809 aa25.81■■□□□ 1.72
KDELR3-202ENST00000409006 CUL9Q8IWT3 2517 aa25.8■■□□□ 1.72
KDELR3-202ENST00000409006 SIP14410 1827 aa25.8■■□□□ 1.72
KDELR3-202ENST00000409006 HSPA4P34932 840 aa25.8■■□□□ 1.72
KDELR3-202ENST00000409006 NAPAP54920 295 aa25.8■■□□□ 1.72
KDELR3-202ENST00000409006 CCDC85BQ15834 202 aaPredicted RBP25.8■■□□□ 1.72
KDELR3-202ENST00000409006 SPRED2Q7Z698 418 aa25.8■■□□□ 1.72
KDELR3-202ENST00000409006 OSBPL7Q9BZF2 842 aa25.8■■□□□ 1.72
KDELR3-202ENST00000409006 SNX14Q9Y5W7 946 aa25.8■■□□□ 1.72
KDELR3-202ENST00000409006 VCANP13611 3396 aa25.79■■□□□ 1.72
KDELR3-202ENST00000409006 GSTTP1A0A1W2PQM5 241 aa25.79■■□□□ 1.72
KDELR3-202ENST00000409006 EPOPA6NHQ4 379 aa25.79■■□□□ 1.72
KDELR3-202ENST00000409006 STXBP3O00186 592 aa25.79■■□□□ 1.72
KDELR3-202ENST00000409006 TCF7P36402 384 aaPredicted RBP25.79■■□□□ 1.72
KDELR3-202ENST00000409006 KCNJ6P48051 423 aa25.79■■□□□ 1.72
KDELR3-202ENST00000409006 APOBRQ0VD83 1088 aa25.79■■□□□ 1.72
KDELR3-202ENST00000409006 JAKMIP1Q96N16 626 aaKnown RBP25.79■■□□□ 1.72
KDELR3-202ENST00000409006 RIC8AQ9NPQ8 531 aa25.79■■□□□ 1.72
KDELR3-202ENST00000409006 JADE2Q9NQC1 790 aa25.79■■□□□ 1.72
KDELR3-202ENST00000409006 LCHNA4D1U4 455 aa25.78■■□□□ 1.72
KDELR3-202ENST00000409006 RSPH10B2B2RC85 870 aa25.78■■□□□ 1.72
KDELR3-202ENST00000409006 HMGB1P09429 215 aaKnown RBP25.78■■□□□ 1.72
KDELR3-202ENST00000409006 RSPH10BP0C881 870 aa25.78■■□□□ 1.72
KDELR3-202ENST00000409006 ADD1P35611 737 aaKnown RBP25.78■■□□□ 1.72
KDELR3-202ENST00000409006 ADAM17P78536 824 aa25.78■■□□□ 1.72
KDELR3-202ENST00000409006 TAP1Q03518 808 aa25.78■■□□□ 1.72
KDELR3-202ENST00000409006 MTMR1Q13613 665 aa25.78■■□□□ 1.72
KDELR3-202ENST00000409006 Q6ZUG5 572 aa25.78■■□□□ 1.72
KDELR3-202ENST00000409006 GIMAP8Q8ND71 665 aaPredicted RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms