RNA–Protein interactions for RNA: ENST00000407521.7

PRDM2-205, Transcript of PR/SET domain 2, humanhuman

TSL 4

Gene PRDM2, Length 513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-205ENST00000407521 NBPF20Q3BBV1 942 aa13.09□□□□□ -0.31
PRDM2-205ENST00000407521 NFRKBQ6P4R8 1299 aa13.09□□□□□ -0.31
PRDM2-205ENST00000407521 Q7L0L9 218 aa13.09□□□□□ -0.31
PRDM2-205ENST00000407521 C16orf59Q7L2K0 433 aa13.09□□□□□ -0.31
PRDM2-205ENST00000407521 TRIM22Q8IYM9 498 aa13.09□□□□□ -0.31
PRDM2-205ENST00000407521 PPP1R13LQ8WUF5 828 aa13.09□□□□□ -0.31
PRDM2-205ENST00000407521 KAT2BQ92831 832 aa13.09□□□□□ -0.31
PRDM2-205ENST00000407521 GPKOWQ92917 476 aaPredicted RBP eCLIP13.09□□□□□ -0.31
PRDM2-205ENST00000407521 ZFP91Q96JP5 570 aaPredicted RBP13.09□□□□□ -0.31
PRDM2-205ENST00000407521 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.09□□□□□ -0.31
PRDM2-205ENST00000407521 WNT8AQ9H1J5 351 aa13.09□□□□□ -0.31
PRDM2-205ENST00000407521 HIPK3Q9H422 1215 aa13.09□□□□□ -0.31
PRDM2-205ENST00000407521 TRMT13Q9NUP7 481 aaKnown RBP13.09□□□□□ -0.31
PRDM2-205ENST00000407521 CDH23Q9H251 3354 aa13.09□□□□□ -0.31
PRDM2-205ENST00000407521 VPS37CA5D8V6 355 aaPredicted RBP13.08□□□□□ -0.32
PRDM2-205ENST00000407521 DEXIO95424 95 aa13.08□□□□□ -0.32
PRDM2-205ENST00000407521 HOXD8P13378 290 aaPredicted RBP13.08□□□□□ -0.32
PRDM2-205ENST00000407521 UBA1P22314 1058 aaKnown RBP13.08□□□□□ -0.32
PRDM2-205ENST00000407521 SP2Q02086 613 aa13.08□□□□□ -0.32
PRDM2-205ENST00000407521 PTPN11Q06124 597 aaPredicted RBP13.08□□□□□ -0.32
PRDM2-205ENST00000407521 SEMA3FQ13275 785 aa13.08□□□□□ -0.32
PRDM2-205ENST00000407521 TMEM240Q5SV17 173 aa13.08□□□□□ -0.32
PRDM2-205ENST00000407521 KCNV1Q6PIU1 500 aa13.08□□□□□ -0.32
PRDM2-205ENST00000407521 USP17L6PQ6QN14 398 aa13.08□□□□□ -0.32
PRDM2-205ENST00000407521 TMEM199Q8N511 208 aa13.08□□□□□ -0.32
PRDM2-205ENST00000407521 PPTC7Q8NI37 304 aa13.08□□□□□ -0.32
PRDM2-205ENST00000407521 RNPC3Q96LT9 517 aaKnown RBP13.08□□□□□ -0.32
PRDM2-205ENST00000407521 RNF26Q9BY78 433 aaPredicted RBP13.08□□□□□ -0.32
PRDM2-205ENST00000407521 VPS54Q9P1Q0 977 aa13.08□□□□□ -0.32
PRDM2-205ENST00000407521 KCNJ14Q9UNX9 436 aa13.08□□□□□ -0.32
PRDM2-205ENST00000407521 ZDHHC9Q9Y397 364 aa13.08□□□□□ -0.32
PRDM2-205ENST00000407521 ICAM3P32942 547 aa13.07□□□□□ -0.32
PRDM2-205ENST00000407521 SMAD3P84022 425 aaKnown RBP13.07□□□□□ -0.32
PRDM2-205ENST00000407521 LAMC2Q13753 1193 aa13.07□□□□□ -0.32
PRDM2-205ENST00000407521 CELF3Q5SZQ8 465 aaKnown RBP13.07□□□□□ -0.32
PRDM2-205ENST00000407521 RASIP1Q5U651 963 aa13.07□□□□□ -0.32
PRDM2-205ENST00000407521 MYSM1Q5VVJ2 828 aa13.07□□□□□ -0.32
PRDM2-205ENST00000407521 FAM109BQ6ICB4 259 aaPredicted RBP13.07□□□□□ -0.32
PRDM2-205ENST00000407521 HEATR3Q7Z4Q2 680 aa13.07□□□□□ -0.32
PRDM2-205ENST00000407521 SESTD1Q86VW0 696 aa13.07□□□□□ -0.32
PRDM2-205ENST00000407521 DEFB123Q8N688 67 aa13.07□□□□□ -0.32
PRDM2-205ENST00000407521 VWCEQ96DN2 955 aa13.07□□□□□ -0.32
PRDM2-205ENST00000407521 C8orf76Q96K31 380 aa13.07□□□□□ -0.32
PRDM2-205ENST00000407521 INPP4AQ96PE3 977 aaPredicted RBP13.07□□□□□ -0.32
PRDM2-205ENST00000407521 MTMR10Q9NXD2 777 aa13.07□□□□□ -0.32
PRDM2-205ENST00000407521 MTMR6Q9Y217 621 aa13.07□□□□□ -0.32
PRDM2-205ENST00000407521 WDR81Q562E7 1941 aa13.07□□□□□ -0.32
PRDM2-205ENST00000407521 STK36Q9NRP7 1315 aa13.07□□□□□ -0.32
PRDM2-205ENST00000407521 MYO9BQ13459 2157 aa13.07□□□□□ -0.32
PRDM2-205ENST00000407521 H3BQV1 296 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 HAS3O00219 553 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 ADAMTS3O15072 1205 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 STX6O43752 255 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 STAM2O75886 525 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 GGPS1O95749 300 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 F2P00734 622 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 SUPT20HL2P0C7V6 817 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 ACRP10323 421 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 TGFB3P10600 412 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 CYP2C9P11712 490 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 SCG2P13521 617 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 CCL23P55773 120 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 DGKDQ16760 1214 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 PFKFB3Q16875 520 aaPredicted RBP13.06□□□□□ -0.32
PRDM2-205ENST00000407521 HSDL1Q3SXM5 330 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 FAM47CQ5HY64 1035 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 PCNX4Q63HM2 1172 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 KRT40Q6A162 431 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 WWC2Q6AWC2 1192 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 TYW1BQ6NUM6 668 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 PSRC1Q6PGN9 363 aaPredicted RBP13.06□□□□□ -0.32
PRDM2-205ENST00000407521 FERMT3Q86UX7 667 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 DHX37Q8IY37 1157 aaKnown RBP13.06□□□□□ -0.32
PRDM2-205ENST00000407521 CUL5Q93034 780 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 CHAMP1Q96JM3 812 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 CTAGE1Q96RT6 745 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 IL23AQ9NPF7 189 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 CHMP5Q9NZZ3 219 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 COL6A3P12111 3177 aa13.06□□□□□ -0.32
PRDM2-205ENST00000407521 SORBS3O60504 671 aa13.05□□□□□ -0.32
PRDM2-205ENST00000407521 ZNF286BP0CG31 522 aa13.05□□□□□ -0.32
PRDM2-205ENST00000407521 PSEN2P49810 448 aa13.05□□□□□ -0.32
PRDM2-205ENST00000407521 UBE2SQ16763 222 aa13.05□□□□□ -0.32
PRDM2-205ENST00000407521 FOXD4L6Q3SYB3 417 aaPredicted RBP13.05□□□□□ -0.32
PRDM2-205ENST00000407521 MCTP1Q6DN14 999 aa13.05□□□□□ -0.32
PRDM2-205ENST00000407521 FOXD4L3Q6VB84 417 aaPredicted RBP13.05□□□□□ -0.32
PRDM2-205ENST00000407521 ZNF365Q70YC5 407 aa13.05□□□□□ -0.32
PRDM2-205ENST00000407521 WASF1Q92558 559 aa13.05□□□□□ -0.32
PRDM2-205ENST00000407521 SCLYQ96I15 445 aa13.05□□□□□ -0.32
PRDM2-205ENST00000407521 BCAS3Q9H6U6 928 aa13.05□□□□□ -0.32
PRDM2-205ENST00000407521 PSTPIP2Q9H939 334 aa13.05□□□□□ -0.32
PRDM2-205ENST00000407521 SIP14410 1827 aa13.04□□□□□ -0.32
PRDM2-205ENST00000407521 SPATA31C2B4DYI2 1134 aa13.04□□□□□ -0.32
PRDM2-205ENST00000407521 STXBP3O00186 592 aa13.04□□□□□ -0.32
PRDM2-205ENST00000407521 FIBPO43427 364 aa13.04□□□□□ -0.32
PRDM2-205ENST00000407521 GNPTABQ3T906 1256 aa13.04□□□□□ -0.32
PRDM2-205ENST00000407521 GDF6Q6KF10 455 aaPredicted RBP13.04□□□□□ -0.32
PRDM2-205ENST00000407521 PPP1R18Q6NYC8 613 aa13.04□□□□□ -0.32
PRDM2-205ENST00000407521 XRRA1Q6P2D8 792 aa13.04□□□□□ -0.32
PRDM2-205ENST00000407521 FBXO18Q8NFZ0 1043 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms