RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 PWWP2AQ96N64 755 aa6.88□□□□□ -1.31
HMGB1P13-201ENST00000406019 KCNC2Q96PR1 638 aa6.88□□□□□ -1.31
HMGB1P13-201ENST00000406019 SYT3Q9BQG1 590 aa6.88□□□□□ -1.31
HMGB1P13-201ENST00000406019 AP5M1Q9H0R1 490 aa6.88□□□□□ -1.31
HMGB1P13-201ENST00000406019 CCDC163A0A0D9SF12 145 aa6.87□□□□□ -1.31
HMGB1P13-201ENST00000406019 WNT9AO14904 365 aa6.87□□□□□ -1.31
HMGB1P13-201ENST00000406019 RFPL3O75679 317 aa6.87□□□□□ -1.31
HMGB1P13-201ENST00000406019 SUMO1P63165 101 aaKnown RBP6.87□□□□□ -1.31
HMGB1P13-201ENST00000406019 CR1LQ2VPA4 569 aa6.87□□□□□ -1.31
HMGB1P13-201ENST00000406019 PLEKHG6Q3KR16 790 aa6.87□□□□□ -1.31
HMGB1P13-201ENST00000406019 TM4SF20Q53R12 229 aa6.87□□□□□ -1.31
HMGB1P13-201ENST00000406019 TCERG1LQ5VWI1 586 aa6.87□□□□□ -1.31
HMGB1P13-201ENST00000406019 SAPCD2Q86UD0 394 aa6.87□□□□□ -1.31
HMGB1P13-201ENST00000406019 TMEM151BQ8IW70 566 aa6.87□□□□□ -1.31
HMGB1P13-201ENST00000406019 FAM26EQ8N5C1 309 aa6.87□□□□□ -1.31
HMGB1P13-201ENST00000406019 LINC00482Q8N8I6 264 aa6.87□□□□□ -1.31
HMGB1P13-201ENST00000406019 NINJ1Q92982 152 aa6.87□□□□□ -1.31
HMGB1P13-201ENST00000406019 JAM3Q9BX67 310 aa6.87□□□□□ -1.31
HMGB1P13-201ENST00000406019 PDGFDQ9GZP0 370 aaPredicted RBP6.87□□□□□ -1.31
HMGB1P13-201ENST00000406019 TYW1Q9NV66 732 aaKnown RBP6.87□□□□□ -1.31
HMGB1P13-201ENST00000406019 MRPS23Q9Y3D9 190 aaKnown RBP6.87□□□□□ -1.31
HMGB1P13-201ENST00000406019 TRAF6Q9Y4K3 522 aa6.87□□□□□ -1.31
HMGB1P13-201ENST00000406019 GRK2P25098 689 aa6.86□□□□□ -1.31
HMGB1P13-201ENST00000406019 GRK3P35626 688 aa6.86□□□□□ -1.31
HMGB1P13-201ENST00000406019 KIZQ2M2Z5 673 aa6.86□□□□□ -1.31
HMGB1P13-201ENST00000406019 STEAP3Q658P3 488 aa6.86□□□□□ -1.31
HMGB1P13-201ENST00000406019 CYP4F22Q6NT55 531 aa6.86□□□□□ -1.31
HMGB1P13-201ENST00000406019 ETV3LQ6ZN32 361 aa6.86□□□□□ -1.31
HMGB1P13-201ENST00000406019 MAMDC2Q7Z304 686 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P13-201ENST00000406019 MILR1Q7Z6M3 343 aa6.86□□□□□ -1.31
HMGB1P13-201ENST00000406019 IFNL3Q8IZI9 196 aa6.86□□□□□ -1.31
HMGB1P13-201ENST00000406019 LINC01356Q8N9X3 169 aa6.86□□□□□ -1.31
HMGB1P13-201ENST00000406019 ARRDC4Q8NCT1 418 aa6.86□□□□□ -1.31
HMGB1P13-201ENST00000406019 GORASP1Q9BQQ3 440 aa6.86□□□□□ -1.31
HMGB1P13-201ENST00000406019 DHRS4Q9BTZ2 278 aa6.86□□□□□ -1.31
HMGB1P13-201ENST00000406019 COA3Q9Y2R0 106 aaPredicted RBP6.86□□□□□ -1.31
HMGB1P13-201ENST00000406019 SH3D21A4FU49 640 aa6.85□□□□□ -1.31
HMGB1P13-201ENST00000406019 HGSO14964 777 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P13-201ENST00000406019 KCNQ2O43526 872 aa6.85□□□□□ -1.31
HMGB1P13-201ENST00000406019 POU3F3P20264 500 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P13-201ENST00000406019 OTOP3Q7RTS5 596 aa6.85□□□□□ -1.31
HMGB1P13-201ENST00000406019 THNSL2Q86YJ6 484 aa6.85□□□□□ -1.31
HMGB1P13-201ENST00000406019 MARCH10Q8NA82 808 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P13-201ENST00000406019 GSTCDQ8NEC7 633 aa6.85□□□□□ -1.31
HMGB1P13-201ENST00000406019 PIP4K2CQ8TBX8 421 aa6.85□□□□□ -1.31
HMGB1P13-201ENST00000406019 PTPRN2Q92932 1015 aa6.85□□□□□ -1.31
HMGB1P13-201ENST00000406019 MFSD3Q96ES6 412 aa6.85□□□□□ -1.31
HMGB1P13-201ENST00000406019 SLC6A20Q9NP91 592 aa6.85□□□□□ -1.31
HMGB1P13-201ENST00000406019 SPATA6Q9NWH7 488 aaPredicted RBP6.85□□□□□ -1.31
HMGB1P13-201ENST00000406019 HSPBP1Q9NZL4 362 aa6.85□□□□□ -1.31
HMGB1P13-201ENST00000406019 ASH2LQ9UBL3 628 aa6.85□□□□□ -1.31
HMGB1P13-201ENST00000406019 WASF3Q9UPY6 502 aa6.85□□□□□ -1.31
HMGB1P13-201ENST00000406019 ADAMTS20P59510 1910 aa6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 KRTAP9-7A8MTY7 169 aa6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 ARVCFO00192 962 aa6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 DGKIO75912 1065 aa6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 PARNO95453 639 aaKnown RBP6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 SOD2P04179 222 aa6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 PDGFRBP09619 1106 aa6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 CHRNA2Q15822 529 aa6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 VMACQ2NL98 169 aa6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 TRIM61Q5EBN2 209 aa6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 TTLL10Q6ZVT0 673 aa6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 UHMK1Q8TAS1 419 aaKnown RBP6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 PHOSPHO1Q8TCT1 267 aa6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 CHAMP1Q96JM3 812 aa6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 SMOC1Q9H4F8 434 aa6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 IPPKQ9H8X2 491 aa6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 TELO2Q9Y4R8 837 aa6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 PCDHB4Q9Y5E5 795 aa6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 PMF1-BGLAPU3KQ54 211 aa6.84□□□□□ -1.31
HMGB1P13-201ENST00000406019 A0A087X0B3 334 aa6.83□□□□□ -1.32
HMGB1P13-201ENST00000406019 TCRBV5S4A2TA0A5A2 114 aa6.83□□□□□ -1.32
HMGB1P13-201ENST00000406019 LRG1P02750 347 aa6.83□□□□□ -1.32
HMGB1P13-201ENST00000406019 STAT3P40763 770 aa6.83□□□□□ -1.32
HMGB1P13-201ENST00000406019 STAT5AP42229 794 aa6.83□□□□□ -1.32
HMGB1P13-201ENST00000406019 PABPC4Q13310 644 aaKnown RBP eCLIP6.83□□□□□ -1.32
HMGB1P13-201ENST00000406019 LIPIQ6XZB0 460 aa6.83□□□□□ -1.32
HMGB1P13-201ENST00000406019 PROSER1Q86XN7 944 aa6.83□□□□□ -1.32
HMGB1P13-201ENST00000406019 NIM1KQ8IY84 436 aa6.83□□□□□ -1.32
HMGB1P13-201ENST00000406019 TTLL11Q8NHH1 800 aa6.83□□□□□ -1.32
HMGB1P13-201ENST00000406019 PCDH19Q8TAB3 1148 aa6.83□□□□□ -1.32
HMGB1P13-201ENST00000406019 SH3RF2Q8TEC5 729 aa6.83□□□□□ -1.32
HMGB1P13-201ENST00000406019 ZNF526Q8TF50 670 aaPredicted RBP6.83□□□□□ -1.32
HMGB1P13-201ENST00000406019 DDX11Q96FC9 970 aa6.83□□□□□ -1.32
HMGB1P13-201ENST00000406019 CDC6Q99741 560 aa6.83□□□□□ -1.32
HMGB1P13-201ENST00000406019 NCOA5Q9HCD5 579 aaKnown RBP6.83□□□□□ -1.32
HMGB1P13-201ENST00000406019 MYOTQ9UBF9 498 aa6.83□□□□□ -1.32
HMGB1P13-201ENST00000406019 A0A1B0GTL3 188 aa6.82□□□□□ -1.32
HMGB1P13-201ENST00000406019 NKRFO15226 690 aaKnown RBP eCLIP6.82□□□□□ -1.32
HMGB1P13-201ENST00000406019 CYP2C8P10632 490 aa6.82□□□□□ -1.32
HMGB1P13-201ENST00000406019 ITGA1P56199 1179 aa6.82□□□□□ -1.32
HMGB1P13-201ENST00000406019 GABREP78334 506 aa6.82□□□□□ -1.32
HMGB1P13-201ENST00000406019 ADAM9Q13443 819 aa6.82□□□□□ -1.32
HMGB1P13-201ENST00000406019 C21orf62-AS1Q17RA5 79 aa6.82□□□□□ -1.32
HMGB1P13-201ENST00000406019 FNDC3BQ53EP0 1204 aaKnown RBP6.82□□□□□ -1.32
HMGB1P13-201ENST00000406019 PRR31Q5SQ13 230 aa6.82□□□□□ -1.32
HMGB1P13-201ENST00000406019 NOL8Q76FK4 1167 aaKnown RBP6.82□□□□□ -1.32
HMGB1P13-201ENST00000406019 ADGRG2Q8IZP9 1017 aa6.82□□□□□ -1.32
HMGB1P13-201ENST00000406019 SLC7A14Q8TBB6 771 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms