RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 EPB41L2O43491 1005 aaKnown RBP15.25■□□□□ 0.03
SDF4-203ENST00000403997 LGALS2P05162 132 aa15.25■□□□□ 0.03
SDF4-203ENST00000403997 ITGB5P18084 799 aa15.25■□□□□ 0.03
SDF4-203ENST00000403997 PBX2P40425 430 aa15.25■□□□□ 0.03
SDF4-203ENST00000403997 UTP14CQ5TAP6 766 aaKnown RBP15.25■□□□□ 0.03
SDF4-203ENST00000403997 ERICH6BQ5W0A0 696 aa15.25■□□□□ 0.03
SDF4-203ENST00000403997 PPP1R18Q6NYC8 613 aa15.25■□□□□ 0.03
SDF4-203ENST00000403997 GIMAP8Q8ND71 665 aaPredicted RBP15.25■□□□□ 0.03
SDF4-203ENST00000403997 AFAP1L1Q8TED9 768 aa15.25■□□□□ 0.03
SDF4-203ENST00000403997 DHX38Q92620 1227 aaKnown RBP15.25■□□□□ 0.03
SDF4-203ENST00000403997 GPRASP2Q96D09 838 aa15.25■□□□□ 0.03
SDF4-203ENST00000403997 CDHR1Q96JP9 859 aa15.25■□□□□ 0.03
SDF4-203ENST00000403997 GPR20Q99678 358 aa15.25■□□□□ 0.03
SDF4-203ENST00000403997 PBX4Q9BYU1 374 aa15.25■□□□□ 0.03
SDF4-203ENST00000403997 TUT1Q9H6E5 874 aaKnown RBP15.25■□□□□ 0.03
SDF4-203ENST00000403997 BARHL2Q9NY43 387 aa15.25■□□□□ 0.03
SDF4-203ENST00000403997 MSRAQ9UJ68 235 aa15.25■□□□□ 0.03
SDF4-203ENST00000403997 UBIAD1Q9Y5Z9 338 aa15.25■□□□□ 0.03
SDF4-203ENST00000403997 COL6A3P12111 3177 aa15.25■□□□□ 0.03
SDF4-203ENST00000403997 hCG_1984214I3L0E3 225 aa15.24■□□□□ 0.03
SDF4-203ENST00000403997 ATP9AO75110 1047 aa15.24■□□□□ 0.03
SDF4-203ENST00000403997 FOSP01100 380 aaPredicted RBP15.24■□□□□ 0.03
SDF4-203ENST00000403997 ACTN1P12814 892 aa15.24■□□□□ 0.03
SDF4-203ENST00000403997 SELPP16109 830 aa15.24■□□□□ 0.03
SDF4-203ENST00000403997 PTK7Q13308 1070 aa15.24■□□□□ 0.03
SDF4-203ENST00000403997 MTMR1Q13613 665 aa15.24■□□□□ 0.03
SDF4-203ENST00000403997 RAB30Q15771 203 aa15.24■□□□□ 0.03
SDF4-203ENST00000403997 FBXL16Q8N461 479 aa15.24■□□□□ 0.03
SDF4-203ENST00000403997 ZNF713Q8N859 430 aaPredicted RBP15.24■□□□□ 0.03
SDF4-203ENST00000403997 MYLIPQ8WY64 445 aa15.24■□□□□ 0.03
SDF4-203ENST00000403997 PGBD1Q96JS3 809 aa15.24■□□□□ 0.03
SDF4-203ENST00000403997 GLT8D2Q9H1C3 349 aa15.24■□□□□ 0.03
SDF4-203ENST00000403997 ZNF576Q9H609 170 aa15.24■□□□□ 0.03
SDF4-203ENST00000403997 JADE2Q9NQC1 790 aa15.24■□□□□ 0.03
SDF4-203ENST00000403997 PKD2L1Q9P0L9 805 aa15.24■□□□□ 0.03
SDF4-203ENST00000403997 TELO2Q9Y4R8 837 aa15.24■□□□□ 0.03
SDF4-203ENST00000403997 TRIP12Q14669 1992 aaPredicted RBP15.24■□□□□ 0.03
SDF4-203ENST00000403997 C17orf102A2RUQ5 167 aa15.23■□□□□ 0.03
SDF4-203ENST00000403997 SMIM10L2AP0DMW4 78 aa15.23■□□□□ 0.03
SDF4-203ENST00000403997 SMIM10L2BP0DMW5 78 aa15.23■□□□□ 0.03
SDF4-203ENST00000403997 CKBP12277 381 aa15.23■□□□□ 0.03
SDF4-203ENST00000403997 SCG2P13521 617 aa15.23■□□□□ 0.03
SDF4-203ENST00000403997 KCNA2P16389 499 aa15.23■□□□□ 0.03
SDF4-203ENST00000403997 AKAP17AQ02040 695 aaKnown RBP15.23■□□□□ 0.03
SDF4-203ENST00000403997 HIC1Q14526 733 aa15.23■□□□□ 0.03
SDF4-203ENST00000403997 PFKFB3Q16875 520 aaPredicted RBP15.23■□□□□ 0.03
SDF4-203ENST00000403997 RUFY3Q7L099 469 aa15.23■□□□□ 0.03
SDF4-203ENST00000403997 LRRC8DQ7L1W4 858 aa15.23■□□□□ 0.03
SDF4-203ENST00000403997 TEX2Q8IWB9 1127 aa15.23■□□□□ 0.03
SDF4-203ENST00000403997 AGXT2Q9BYV1 514 aa15.23■□□□□ 0.03
SDF4-203ENST00000403997 ZSWIM6Q9HCJ5 1215 aa15.23■□□□□ 0.03
SDF4-203ENST00000403997 ZNF215Q9UL58 517 aaPredicted RBP15.23■□□□□ 0.03
SDF4-203ENST00000403997 MAFGO15525 162 aa15.22■□□□□ 0.03
SDF4-203ENST00000403997 PRPF3O43395 683 aaKnown RBP15.22■□□□□ 0.03
SDF4-203ENST00000403997 PARNO95453 639 aaKnown RBP15.22■□□□□ 0.03
SDF4-203ENST00000403997 CENPBP07199 599 aaPredicted RBP15.22■□□□□ 0.03
SDF4-203ENST00000403997 ATP2A2P16615 1042 aaKnown RBP15.22■□□□□ 0.03
SDF4-203ENST00000403997 RABGGTBP53611 331 aa15.22■□□□□ 0.03
SDF4-203ENST00000403997 RBL2Q08999 1139 aa15.22■□□□□ 0.03
SDF4-203ENST00000403997 GRIN2CQ14957 1233 aa15.22■□□□□ 0.03
SDF4-203ENST00000403997 TRIM50Q86XT4 487 aa15.22■□□□□ 0.03
SDF4-203ENST00000403997 ATP6V0A1Q93050 837 aa15.22■□□□□ 0.03
SDF4-203ENST00000403997 MXRA8Q9BRK3 442 aa15.22■□□□□ 0.03
SDF4-203ENST00000403997 ANO3Q9BYT9 981 aa15.22■□□□□ 0.03
SDF4-203ENST00000403997 TMEM260Q9NX78 707 aa15.22■□□□□ 0.03
SDF4-203ENST00000403997 CYP46A1Q9Y6A2 500 aa15.22■□□□□ 0.03
SDF4-203ENST00000403997 MYO9BQ13459 2157 aa15.21■□□□□ 0.03
SDF4-203ENST00000403997 SCN5AQ14524 2016 aa15.21■□□□□ 0.03
SDF4-203ENST00000403997 GNAT1P11488 350 aa15.21■□□□□ 0.03
SDF4-203ENST00000403997 PDIA3P30101 505 aaKnown RBP15.21■□□□□ 0.03
SDF4-203ENST00000403997 TCF7P36402 384 aaPredicted RBP15.21■□□□□ 0.03
SDF4-203ENST00000403997 ZNF76P36508 570 aa15.21■□□□□ 0.03
SDF4-203ENST00000403997 CCT2P78371 535 aaKnown RBP15.21■□□□□ 0.03
SDF4-203ENST00000403997 AP3B2Q13367 1082 aa15.21■□□□□ 0.03
SDF4-203ENST00000403997 GPNMBQ14956 572 aa15.21■□□□□ 0.03
SDF4-203ENST00000403997 TRIM71Q2Q1W2 868 aaKnown RBP15.21■□□□□ 0.03
SDF4-203ENST00000403997 ZNF618Q5T7W0 954 aa15.21■□□□□ 0.03
SDF4-203ENST00000403997 JAKMIP3Q5VZ66 844 aa15.21■□□□□ 0.03
SDF4-203ENST00000403997 SERINC5Q86VE9 423 aa15.21■□□□□ 0.03
SDF4-203ENST00000403997 CYP2W1Q8TAV3 490 aa15.21■□□□□ 0.03
SDF4-203ENST00000403997 SEPT1Q8WYJ6 367 aa15.21■□□□□ 0.03
SDF4-203ENST00000403997 WNT8BQ93098 351 aa15.21■□□□□ 0.03
SDF4-203ENST00000403997 PHKBQ93100 1093 aa15.21■□□□□ 0.03
SDF4-203ENST00000403997 NKX2-4Q9H2Z4 354 aa15.21■□□□□ 0.03
SDF4-203ENST00000403997 RNPEPQ9H4A4 650 aa15.21■□□□□ 0.03
SDF4-203ENST00000403997 SLC28A3Q9HAS3 691 aa15.21■□□□□ 0.03
SDF4-203ENST00000403997 SETD4Q9NVD3 440 aa15.21■□□□□ 0.03
SDF4-203ENST00000403997 TREHO43280 583 aa15.2■□□□□ 0.02
SDF4-203ENST00000403997 PPFIA3O75145 1194 aa15.2■□□□□ 0.02
SDF4-203ENST00000403997 FOSL2P15408 326 aa15.2■□□□□ 0.02
SDF4-203ENST00000403997 THPOP40225 353 aa15.2■□□□□ 0.02
SDF4-203ENST00000403997 CLK2P49760 499 aaKnown RBP15.2■□□□□ 0.02
SDF4-203ENST00000403997 EVCP57679 992 aa15.2■□□□□ 0.02
SDF4-203ENST00000403997 TOB2Q14106 344 aaPredicted RBP15.2■□□□□ 0.02
SDF4-203ENST00000403997 PKN1Q16512 942 aa15.2■□□□□ 0.02
SDF4-203ENST00000403997 CCDC12Q8WUD4 166 aaPredicted RBP15.2■□□□□ 0.02
SDF4-203ENST00000403997 LARP6Q9BRS8 491 aaKnown RBP15.2■□□□□ 0.02
SDF4-203ENST00000403997 SLC26A6Q9BXS9 759 aa15.2■□□□□ 0.02
SDF4-203ENST00000403997 UPF3BQ9BZI7 483 aaKnown RBP15.2■□□□□ 0.02
SDF4-203ENST00000403997 TM6SF1Q9BZW5 370 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms