RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 SP4Q02446 784 aa19.51■□□□□ 0.71
PTCHD3P3-201ENST00000403073 Q4G0T1 1027 aa19.51■□□□□ 0.71
PTCHD3P3-201ENST00000403073 BRDTQ58F21 947 aaPredicted RBP19.51■□□□□ 0.71
PTCHD3P3-201ENST00000403073 METTL7BQ6UX53 244 aa19.51■□□□□ 0.71
PTCHD3P3-201ENST00000403073 CXCL17Q6UXB2 119 aa19.51■□□□□ 0.71
PTCHD3P3-201ENST00000403073 NOSTRINQ8IVI9 506 aa19.51■□□□□ 0.71
PTCHD3P3-201ENST00000403073 GIMAP8Q8ND71 665 aaPredicted RBP19.51■□□□□ 0.71
PTCHD3P3-201ENST00000403073 PPTC7Q8NI37 304 aa19.51■□□□□ 0.71
PTCHD3P3-201ENST00000403073 MBOAT7Q96N66 472 aa19.51■□□□□ 0.71
PTCHD3P3-201ENST00000403073 ZNF577Q9BSK1 485 aa19.51■□□□□ 0.71
PTCHD3P3-201ENST00000403073 A0A1W2PQ45 241 aaPredicted RBP19.5■□□□□ 0.71
PTCHD3P3-201ENST00000403073 A0A1W2PQY0 241 aa19.5■□□□□ 0.71
PTCHD3P3-201ENST00000403073 IPO5O00410 1097 aaKnown RBP19.5■□□□□ 0.71
PTCHD3P3-201ENST00000403073 WNT7AO00755 349 aa19.5■□□□□ 0.71
PTCHD3P3-201ENST00000403073 MSH4O15457 936 aa19.5■□□□□ 0.71
PTCHD3P3-201ENST00000403073 SLC37A4O43826 429 aa19.5■□□□□ 0.71
PTCHD3P3-201ENST00000403073 SYT1P21579 422 aa19.5■□□□□ 0.71
PTCHD3P3-201ENST00000403073 U2AF2P26368 475 aaKnown RBP eCLIP19.5■□□□□ 0.71
PTCHD3P3-201ENST00000403073 RGS19P49795 217 aa19.5■□□□□ 0.71
PTCHD3P3-201ENST00000403073 SETQ01105 290 aaPredicted RBP19.5■□□□□ 0.71
PTCHD3P3-201ENST00000403073 MOXD1Q6UVY6 613 aa19.5■□□□□ 0.71
PTCHD3P3-201ENST00000403073 GJA10Q969M2 543 aa19.5■□□□□ 0.71
PTCHD3P3-201ENST00000403073 VTI1AQ96AJ9 217 aa19.5■□□□□ 0.71
PTCHD3P3-201ENST00000403073 SDF4Q9BRK5 362 aa19.5■□□□□ 0.71
PTCHD3P3-201ENST00000403073 DDX25Q9UHL0 483 aaKnown RBP19.5■□□□□ 0.71
PTCHD3P3-201ENST00000403073 VPS37CA5D8V6 355 aaPredicted RBP19.49■□□□□ 0.71
PTCHD3P3-201ENST00000403073 DDX39AO00148 427 aaKnown RBP19.49■□□□□ 0.71
PTCHD3P3-201ENST00000403073 DHX15O43143 795 aaKnown RBP19.49■□□□□ 0.71
PTCHD3P3-201ENST00000403073 PDCP20941 246 aa19.49■□□□□ 0.71
PTCHD3P3-201ENST00000403073 ATN1P54259 1190 aaPredicted RBP19.49■□□□□ 0.71
PTCHD3P3-201ENST00000403073 DGKDQ16760 1214 aa19.49■□□□□ 0.71
PTCHD3P3-201ENST00000403073 PPP4R3AQ6IN85 833 aa19.49■□□□□ 0.71
PTCHD3P3-201ENST00000403073 GPR20Q99678 358 aa19.49■□□□□ 0.71
PTCHD3P3-201ENST00000403073 POLR3EQ9NVU0 708 aa19.49■□□□□ 0.71
PTCHD3P3-201ENST00000403073 NFASCO94856 1347 aa19.49■□□□□ 0.71
PTCHD3P3-201ENST00000403073 BRCA2P51587 3418 aa19.48■□□□□ 0.71
PTCHD3P3-201ENST00000403073 NOP56O00567 594 aaKnown RBP19.48■□□□□ 0.71
PTCHD3P3-201ENST00000403073 KPNA6O60684 536 aa19.48■□□□□ 0.71
PTCHD3P3-201ENST00000403073 PPFIA4O75335 1185 aa19.48■□□□□ 0.71
PTCHD3P3-201ENST00000403073 PSMC6P62333 389 aa19.48■□□□□ 0.71
PTCHD3P3-201ENST00000403073 PURAQ00577 322 aaKnown RBP19.48■□□□□ 0.71
PTCHD3P3-201ENST00000403073 GLT1D1Q96MS3 346 aa19.48■□□□□ 0.71
PTCHD3P3-201ENST00000403073 NAP1L4Q99733 375 aaKnown RBP19.48■□□□□ 0.71
PTCHD3P3-201ENST00000403073 JPH1Q9HDC5 661 aaPredicted RBP19.48■□□□□ 0.71
PTCHD3P3-201ENST00000403073 STARD7Q9NQZ5 370 aa19.48■□□□□ 0.71
PTCHD3P3-201ENST00000403073 SLC9A2Q9UBY0 812 aa19.48■□□□□ 0.71
PTCHD3P3-201ENST00000403073 GSTTP1A0A1W2PQM5 241 aa19.47■□□□□ 0.71
PTCHD3P3-201ENST00000403073 GCFC2P16383 781 aaKnown RBP19.47■□□□□ 0.71
PTCHD3P3-201ENST00000403073 SLC39A5Q6ZMH5 540 aa19.47■□□□□ 0.71
PTCHD3P3-201ENST00000403073 SLC5A5Q92911 643 aa19.47■□□□□ 0.71
PTCHD3P3-201ENST00000403073 MTG1Q9BT17 334 aaPredicted RBP19.47■□□□□ 0.71
PTCHD3P3-201ENST00000403073 TBC1D22BQ9NU19 505 aa19.47■□□□□ 0.71
PTCHD3P3-201ENST00000403073 CABYRO75952 493 aa19.46■□□□□ 0.71
PTCHD3P3-201ENST00000403073 CCNE2O96020 404 aa19.46■□□□□ 0.71
PTCHD3P3-201ENST00000403073 ZNF286BP0CG31 522 aa19.46■□□□□ 0.71
PTCHD3P3-201ENST00000403073 HOXD8P13378 290 aaPredicted RBP19.46■□□□□ 0.71
PTCHD3P3-201ENST00000403073 TOB1P50616 345 aaPredicted RBP19.46■□□□□ 0.71
PTCHD3P3-201ENST00000403073 CHMP4BP1P59074 171 aa19.46■□□□□ 0.71
PTCHD3P3-201ENST00000403073 BECN1Q14457 450 aa19.46■□□□□ 0.71
PTCHD3P3-201ENST00000403073 ZNF174Q15697 407 aa19.46■□□□□ 0.71
PTCHD3P3-201ENST00000403073 LRRC26Q2I0M4 334 aa19.46■□□□□ 0.71
PTCHD3P3-201ENST00000403073 UTP14CQ5TAP6 766 aaKnown RBP19.46■□□□□ 0.71
PTCHD3P3-201ENST00000403073 POTEDQ86YR6 584 aa19.46■□□□□ 0.71
PTCHD3P3-201ENST00000403073 ETNPPLQ8TBG4 499 aa19.46■□□□□ 0.71
PTCHD3P3-201ENST00000403073 PPP1R13LQ8WUF5 828 aa19.46■□□□□ 0.71
PTCHD3P3-201ENST00000403073 SEPT1Q8WYJ6 367 aa19.46■□□□□ 0.71
PTCHD3P3-201ENST00000403073 KAT2BQ92831 832 aa19.46■□□□□ 0.71
PTCHD3P3-201ENST00000403073 FRMPD3Q5JV73 1810 aa19.46■□□□□ 0.71
PTCHD3P3-201ENST00000403073 KIAA1217Q5T5P2 1943 aa19.45■□□□□ 0.7
PTCHD3P3-201ENST00000403073 MCM7P33993 719 aa19.45■□□□□ 0.7
PTCHD3P3-201ENST00000403073 TCF7P36402 384 aaPredicted RBP19.45■□□□□ 0.7
PTCHD3P3-201ENST00000403073 ACTR2P61160 394 aa19.45■□□□□ 0.7
PTCHD3P3-201ENST00000403073 NBR1Q14596 966 aa19.45■□□□□ 0.7
PTCHD3P3-201ENST00000403073 LRCH2Q5VUJ6 765 aa19.45■□□□□ 0.7
PTCHD3P3-201ENST00000403073 FERMT3Q86UX7 667 aa19.45■□□□□ 0.7
PTCHD3P3-201ENST00000403073 HAS1Q92839 578 aa19.45■□□□□ 0.7
PTCHD3P3-201ENST00000403073 RIT2Q99578 217 aa19.45■□□□□ 0.7
PTCHD3P3-201ENST00000403073 C16orf70Q9BSU1 422 aa19.45■□□□□ 0.7
PTCHD3P3-201ENST00000403073 NOL7Q9UMY1 257 aaKnown RBP19.45■□□□□ 0.7
PTCHD3P3-201ENST00000403073 MTMR6Q9Y217 621 aa19.45■□□□□ 0.7
PTCHD3P3-201ENST00000403073 GRIN2DO15399 1336 aa19.45■□□□□ 0.7
PTCHD3P3-201ENST00000403073 ELP1O95163 1332 aa19.45■□□□□ 0.7
PTCHD3P3-201ENST00000403073 KIAA0100Q14667 2235 aaKnown RBP19.44■□□□□ 0.7
PTCHD3P3-201ENST00000403073 STX6O43752 255 aa19.44■□□□□ 0.7
PTCHD3P3-201ENST00000403073 MARCH6O60337 910 aa19.44■□□□□ 0.7
PTCHD3P3-201ENST00000403073 GAS7O60861 476 aa19.44■□□□□ 0.7
PTCHD3P3-201ENST00000403073 PSMD10O75832 226 aa19.44■□□□□ 0.7
PTCHD3P3-201ENST00000403073 LGALS2P05162 132 aa19.44■□□□□ 0.7
PTCHD3P3-201ENST00000403073 ITGA7Q13683 1181 aa19.44■□□□□ 0.7
PTCHD3P3-201ENST00000403073 TTC38Q5R3I4 469 aa19.44■□□□□ 0.7
PTCHD3P3-201ENST00000403073 KCNMB3Q9NPA1 279 aa19.44■□□□□ 0.7
PTCHD3P3-201ENST00000403073 A0A0U1RQG5 324 aaPredicted RBP19.43■□□□□ 0.7
PTCHD3P3-201ENST00000403073 TRAPPC10P48553 1259 aa19.43■□□□□ 0.7
PTCHD3P3-201ENST00000403073 NBPF20Q3BBV1 942 aa19.43■□□□□ 0.7
PTCHD3P3-201ENST00000403073 TRIM50Q86XT4 487 aa19.43■□□□□ 0.7
PTCHD3P3-201ENST00000403073 DPF3Q92784 378 aa19.43■□□□□ 0.7
PTCHD3P3-201ENST00000403073 FAM20AQ96MK3 541 aa19.43■□□□□ 0.7
PTCHD3P3-201ENST00000403073 HTATIP2Q9BUP3 242 aa19.43■□□□□ 0.7
PTCHD3P3-201ENST00000403073 TEKT3Q9BXF9 490 aa19.43■□□□□ 0.7
PTCHD3P3-201ENST00000403073 TMEM60Q9H2L4 133 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms