RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 KRT27Q7Z3Y8 459 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 COG1Q8WTW3 980 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 TBC1D5Q92609 795 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 HAS1Q92839 578 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 MS4A14Q96JA4 679 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 DNAJC7Q99615 494 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 RGL1Q9NZL6 768 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 ATP6V0A2Q9Y487 856 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 PCDHB13Q9Y5F0 798 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 PCDHA13Q9Y5I0 950 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.82□□□□□ -1.64
SMC6-203ENST00000402989 DDX60LQ5H9U9 1706 aaKnown RBP4.82□□□□□ -1.64
SMC6-203ENST00000402989 CCDC151A5D8V7 595 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 LRRIQ3A6PVS8 624 aaPredicted RBP4.82□□□□□ -1.64
SMC6-203ENST00000402989 EDIL3O43854 480 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 TACC1O75410 805 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 CASP5P51878 434 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 CASP8Q14790 479 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 MAN2A1Q16706 1144 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 APOBEC3HQ6NTF7 200 aaKnown RBP4.82□□□□□ -1.64
SMC6-203ENST00000402989 SFR1Q86XK3 245 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 TPH2Q8IWU9 490 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 HDAC7Q8WUI4 952 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 IFT81Q8WYA0 676 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 MTMR9Q96QG7 549 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 CSRNP1Q96S65 589 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 DNAJC18Q9H819 358 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 HOMER2Q9NSB8 354 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 PPP1R1BQ9UD71 204 aaPredicted RBP4.82□□□□□ -1.64
SMC6-203ENST00000402989 TRPC5Q9UL62 973 aaPredicted RBP4.82□□□□□ -1.64
SMC6-203ENST00000402989 GAKO14976 1311 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 A0A1W2PQC6 194 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 ESYT3A0FGR9 886 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 F5H6K3 240 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 ECE2O60344 883 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 SORBS3O60504 671 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 GCNT3O95395 438 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 CAPN2P17655 700 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 NR2F2P24468 414 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 ECE1P42892 770 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 KLRC3Q07444 240 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 ADAM9Q13443 819 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 BRD3Q15059 726 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 ABCB5Q2M3G0 1257 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 RBM26Q5T8P6 1007 aaKnown RBP4.82□□□□□ -1.64
SMC6-203ENST00000402989 GJB7Q6PEY0 223 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 FBXO11Q86XK2 927 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 CCDC65Q8IXS2 484 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 SP8Q8IXZ3 490 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 SPAG5Q96R06 1193 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 BHMT2Q9H2M3 363 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 CENPHQ9H3R5 247 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 CUEDC2Q9H467 287 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 RIC8AQ9NPQ8 531 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 STK17AQ9UEE5 414 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 ADAMTS1Q9UHI8 967 aa4.82□□□□□ -1.64
SMC6-203ENST00000402989 LRRC37AA6NMS7 1700 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 PCNTO95613 3336 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 ADAMTSL1Q8N6G6 1762 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 C21orf2O43822 256 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 EIF3JO75822 258 aaKnown RBP4.81□□□□□ -1.64
SMC6-203ENST00000402989 KIF20AO95235 890 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 MYBP10242 640 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 MYBL2P10244 700 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 VAV2P52735 878 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 HNRNPH2P55795 449 aaKnown RBP4.81□□□□□ -1.64
SMC6-203ENST00000402989 ARHGAP4P98171 946 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 KCNA1Q09470 495 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 BEND6Q5SZJ8 279 aaPredicted RBP4.81□□□□□ -1.64
SMC6-203ENST00000402989 SND1Q7KZF4 910 aaKnown RBP eCLIP4.81□□□□□ -1.64
SMC6-203ENST00000402989 PROM2Q8N271 834 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 GOLGA6L1Q8N7Z2 621 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 CRAMP1Q96RY5 1269 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 NUP58Q9BVL2 599 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 PACSIN1Q9BY11 444 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 EMILIN3Q9NT22 766 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 SALL4Q9UJQ4 1053 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 ZBTB12Q9Y330 459 aaPredicted RBP4.81□□□□□ -1.64
SMC6-203ENST00000402989 COL4A3BPQ9Y5P4 624 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 LTBP1Q14766 1721 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 SMCHD1A6NHR9 2005 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 PPIP5K2O43314 1243 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 TBCAO75347 108 aaKnown RBP4.81□□□□□ -1.64
SMC6-203ENST00000402989 FGFR1OPO95684 399 aaKnown RBP4.81□□□□□ -1.64
SMC6-203ENST00000402989 NDUFB10O96000 172 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 FXR2P51116 673 aaKnown RBP eCLIP4.81□□□□□ -1.641e-6■■■■■ 27.8
SMC6-203ENST00000402989 JAG1P78504 1218 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 GABPAQ06546 454 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 EHHADHQ08426 723 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 KLHL30Q0D2K2 578 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 GPATCH4Q5T3I0 446 aaKnown RBP4.81□□□□□ -1.64
SMC6-203ENST00000402989 SFMBT2Q5VUG0 894 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 CENPPQ6IPU0 288 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 ADAT2Q7Z6V5 191 aaKnown RBP4.81□□□□□ -1.64
SMC6-203ENST00000402989 CDAN1Q8IWY9 1227 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 KLHL7Q8IXQ5 586 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 CPXCR1Q8N123 301 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 GUF1Q8N442 669 aaKnown RBP4.81□□□□□ -1.64
SMC6-203ENST00000402989 CERKQ8TCT0 537 aa4.81□□□□□ -1.64
SMC6-203ENST00000402989 ACER1Q8TDN7 264 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms