RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 GDF15Q99988 308 aa21.9■■□□□ 1.1
RTN4-207ENST00000402434 LLPHQ9BRT6 129 aaKnown RBP21.9■■□□□ 1.1
RTN4-207ENST00000402434 ALG1Q9BT22 464 aa21.9■■□□□ 1.1
RTN4-207ENST00000402434 PRO3102Q9H379 93 aa21.9■■□□□ 1.1
RTN4-207ENST00000402434 KCNJ14Q9UNX9 436 aa21.9■■□□□ 1.1
RTN4-207ENST00000402434 FAM86B1E9PN63 330 aa21.89■■□□□ 1.09
RTN4-207ENST00000402434 ST18O60284 1047 aa21.89■■□□□ 1.09
RTN4-207ENST00000402434 SORBS3O60504 671 aa21.89■■□□□ 1.09
RTN4-207ENST00000402434 JAK2O60674 1132 aa21.89■■□□□ 1.09
RTN4-207ENST00000402434 FAM86B2P0C5J1 330 aa21.89■■□□□ 1.09
RTN4-207ENST00000402434 IGLV3-22A0A075B6J6 115 aa21.88■■□□□ 1.09
RTN4-207ENST00000402434 HAS3O00219 553 aa21.88■■□□□ 1.09
RTN4-207ENST00000402434 EDIL3O43854 480 aa21.88■■□□□ 1.09
RTN4-207ENST00000402434 F2P00734 622 aa21.88■■□□□ 1.09
RTN4-207ENST00000402434 ARP10275 920 aa21.88■■□□□ 1.09
RTN4-207ENST00000402434 CIITAP33076 1130 aa21.88■■□□□ 1.09
RTN4-207ENST00000402434 ZNF76P36508 570 aa21.88■■□□□ 1.09
RTN4-207ENST00000402434 MAGEA10P43363 369 aaPredicted RBP21.88■■□□□ 1.09
RTN4-207ENST00000402434 GPR20Q99678 358 aa21.88■■□□□ 1.09
RTN4-207ENST00000402434 C16orf70Q9BSU1 422 aa21.88■■□□□ 1.09
RTN4-207ENST00000402434 PRDM5Q9NQX1 630 aaPredicted RBP21.88■■□□□ 1.09
RTN4-207ENST00000402434 GJB4Q9NTQ9 266 aa21.88■■□□□ 1.09
RTN4-207ENST00000402434 TMEM39AQ9NV64 488 aa21.88■■□□□ 1.09
RTN4-207ENST00000402434 TBX21Q9UL17 535 aa21.88■■□□□ 1.09
RTN4-207ENST00000402434 NOP56O00567 594 aaKnown RBP21.87■■□□□ 1.09
RTN4-207ENST00000402434 TLR3O15455 904 aaKnown RBP21.87■■□□□ 1.09
RTN4-207ENST00000402434 USP11P51784 963 aa21.87■■□□□ 1.09
RTN4-207ENST00000402434 PTPN11Q06124 597 aaPredicted RBP21.87■■□□□ 1.09
RTN4-207ENST00000402434 CCDC83Q8IWF9 413 aa21.87■■□□□ 1.09
RTN4-207ENST00000402434 COLQQ9Y215 455 aaPredicted RBP21.87■■□□□ 1.09
RTN4-207ENST00000402434 RANBP2P49792 3224 aaKnown RBP21.87■■□□□ 1.09
RTN4-207ENST00000402434 DOCK5Q9H7D0 1870 aa21.87■■□□□ 1.09
RTN4-207ENST00000402434 B4GALT4O60513 344 aa21.86■■□□□ 1.09
RTN4-207ENST00000402434 ZNF286BP0CG31 522 aa21.86■■□□□ 1.09
RTN4-207ENST00000402434 BMP8BP34820 402 aa21.86■■□□□ 1.09
RTN4-207ENST00000402434 CHRDL2Q6WN34 429 aa21.86■■□□□ 1.09
RTN4-207ENST00000402434 SESTD1Q86VW0 696 aa21.86■■□□□ 1.09
RTN4-207ENST00000402434 KATNAL1Q9BW62 490 aa21.86■■□□□ 1.09
RTN4-207ENST00000402434 AGO4Q9HCK5 861 aaKnown RBP21.86■■□□□ 1.09
RTN4-207ENST00000402434 PCDH10Q9P2E7 1040 aa21.86■■□□□ 1.09
RTN4-207ENST00000402434 TELO2Q9Y4R8 837 aa21.86■■□□□ 1.09
RTN4-207ENST00000402434 ITGB8P26012 769 aa21.85■■□□□ 1.09
RTN4-207ENST00000402434 PLA2G4DQ86XP0 818 aa21.85■■□□□ 1.09
RTN4-207ENST00000402434 TBCKQ8TEA7 893 aa21.85■■□□□ 1.09
RTN4-207ENST00000402434 TRPV6Q9H1D0 765 aa21.85■■□□□ 1.09
RTN4-207ENST00000402434 NFASCO94856 1347 aa21.85■■□□□ 1.09
RTN4-207ENST00000402434 CD2BP2O95400 341 aaKnown RBP21.84■■□□□ 1.09
RTN4-207ENST00000402434 LGALS2P05162 132 aa21.84■■□□□ 1.09
RTN4-207ENST00000402434 PSEN2P49810 448 aa21.84■■□□□ 1.09
RTN4-207ENST00000402434 ITGB3BPQ13352 177 aaPredicted RBP21.84■■□□□ 1.09
RTN4-207ENST00000402434 MFSD10Q14728 455 aa21.84■■□□□ 1.09
RTN4-207ENST00000402434 KRT25Q7Z3Z0 450 aa21.84■■□□□ 1.09
RTN4-207ENST00000402434 LENG9Q96B70 501 aa21.84■■□□□ 1.09
RTN4-207ENST00000402434 LBHD1Q9BQE6 289 aaPredicted RBP21.84■■□□□ 1.09
RTN4-207ENST00000402434 PKD2L1Q9P0L9 805 aa21.84■■□□□ 1.09
RTN4-207ENST00000402434 TRIOBPQ9H2D6 2365 aa21.84■■□□□ 1.09
RTN4-207ENST00000402434 H3BRB1 525 aa21.83■■□□□ 1.09
RTN4-207ENST00000402434 SUPT20HL2P0C7V6 817 aa21.83■■□□□ 1.09
RTN4-207ENST00000402434 RAG1P15918 1043 aa21.83■■□□□ 1.09
RTN4-207ENST00000402434 MDM2Q00987 491 aaPredicted RBP21.83■■□□□ 1.09
RTN4-207ENST00000402434 SETQ01105 290 aaPredicted RBP21.83■■□□□ 1.09
RTN4-207ENST00000402434 KIAA0753Q2KHM9 967 aa21.83■■□□□ 1.09
RTN4-207ENST00000402434 OXER1Q8TDS5 423 aa21.83■■□□□ 1.09
RTN4-207ENST00000402434 SEPT1Q8WYJ6 367 aa21.83■■□□□ 1.09
RTN4-207ENST00000402434 TUT1Q9H6E5 874 aaKnown RBP21.83■■□□□ 1.09
RTN4-207ENST00000402434 JPH1Q9HDC5 661 aaPredicted RBP21.83■■□□□ 1.09
RTN4-207ENST00000402434 TRMT13Q9NUP7 481 aaKnown RBP21.83■■□□□ 1.09
RTN4-207ENST00000402434 SLC9A2Q9UBY0 812 aa21.83■■□□□ 1.09
RTN4-207ENST00000402434 GSTTP1A0A1W2PQM5 241 aa21.83■■□□□ 1.08
RTN4-207ENST00000402434 DHX15O43143 795 aaKnown RBP21.83■■□□□ 1.08
RTN4-207ENST00000402434 TIMP1P01033 207 aa21.83■■□□□ 1.08
RTN4-207ENST00000402434 MCM2P49736 904 aa21.83■■□□□ 1.08
RTN4-207ENST00000402434 HMGN5P82970 282 aaKnown RBP21.83■■□□□ 1.08
RTN4-207ENST00000402434 SP4Q02446 784 aa21.83■■□□□ 1.08
RTN4-207ENST00000402434 NONOQ15233 471 aaKnown RBP eCLIP21.83■■□□□ 1.088e-7■■□□□ 13.4
RTN4-207ENST00000402434 FAM47CQ5HY64 1035 aa21.83■■□□□ 1.08
RTN4-207ENST00000402434 PPP1R13LQ8WUF5 828 aa21.83■■□□□ 1.08
RTN4-207ENST00000402434 SDF4Q9BRK5 362 aa21.83■■□□□ 1.08
RTN4-207ENST00000402434 LTBP2Q14767 1821 aa21.83■■□□□ 1.08
RTN4-207ENST00000402434 CYP3A7-CYP3A51PA0A087WV96 503 aa21.82■■□□□ 1.08
RTN4-207ENST00000402434 IPO5O00410 1097 aaKnown RBP21.82■■□□□ 1.08
RTN4-207ENST00000402434 CYP3A7P24462 503 aa21.82■■□□□ 1.08
RTN4-207ENST00000402434 TCF7P36402 384 aaPredicted RBP21.82■■□□□ 1.08
RTN4-207ENST00000402434 PRR16Q569H4 304 aa21.82■■□□□ 1.08
RTN4-207ENST00000402434 BADQ92934 168 aa21.82■■□□□ 1.08
RTN4-207ENST00000402434 HDAC6Q9UBN7 1215 aa21.82■■□□□ 1.08
RTN4-207ENST00000402434 GTF2IRD1Q9UHL9 959 aa21.82■■□□□ 1.08
RTN4-207ENST00000402434 MMP1P03956 469 aa21.81■■□□□ 1.08
RTN4-207ENST00000402434 CHMP4BP1P59074 171 aa21.81■■□□□ 1.08
RTN4-207ENST00000402434 KRT40Q6A162 431 aa21.81■■□□□ 1.08
RTN4-207ENST00000402434 MOXD1Q6UVY6 613 aa21.81■■□□□ 1.08
RTN4-207ENST00000402434 C7orf31Q8N865 590 aa21.81■■□□□ 1.08
RTN4-207ENST00000402434 TNFRSF25Q93038 417 aa21.81■■□□□ 1.08
RTN4-207ENST00000402434 TMX3Q96JJ7 454 aa21.81■■□□□ 1.08
RTN4-207ENST00000402434 CCDC194A0A1B0GVG4 234 aa21.8■■□□□ 1.08
RTN4-207ENST00000402434 A0A1W2PPC1 479 aa21.8■■□□□ 1.08
RTN4-207ENST00000402434 ATG7O95352 703 aa21.8■■□□□ 1.08
RTN4-207ENST00000402434 KRT2P35908 639 aa21.8■■□□□ 1.08
RTN4-207ENST00000402434 INF2Q27J81 1249 aa21.8■■□□□ 1.08
RTN4-207ENST00000402434 GDF6Q6KF10 455 aaPredicted RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms