RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 C2orf72A6NCS6 295 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 EYA2O00167 538 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 KIF20AO95235 890 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 DNTTP04053 509 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 CD86P42081 329 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 GRK6P43250 576 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 MAGEA8P43361 318 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 CTCFP49711 727 aaPredicted RBP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 RBM5P52756 815 aaKnown RBP eCLIP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 LMNB2Q03252 620 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 LRRC74AQ0VAA2 488 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 EIF4A2Q14240 407 aaKnown RBP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 RABL6Q3YEC7 729 aaPredicted RBP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 RNF219Q5W0B1 726 aaPredicted RBP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 HEATR6Q6AI08 1181 aaKnown RBP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 CNNM4Q6P4Q7 775 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 BTNL9Q6UXG8 535 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 DZIP1Q86YF9 867 aaKnown RBP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 NRSN1Q8IZ57 195 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 NAT8LQ8N9F0 302 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 FLAD1Q8NFF5 587 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 LEO1Q8WVC0 666 aaPredicted RBP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 SLC7A3Q8WY07 619 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 DPF3Q92784 378 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 ASIC4Q96FT7 647 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 SHDQ96IW2 340 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 RMDN3Q96TC7 470 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 KIF2CQ99661 725 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 CDK19Q9BWU1 502 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 SAP130Q9H0E3 1048 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 DDX21Q9NR30 783 aaKnown RBP eCLIP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 TRMT13Q9NUP7 481 aaKnown RBP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 ABCF3Q9NUQ8 709 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 FAM184BQ9ULE4 1060 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 TRAK1Q9UPV9 953 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 RRP7AQ9Y3A4 280 aaKnown RBP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 TRIM17Q9Y577 477 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 BTBD11A6QL63 1104 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 MINDY4BA8MYZ0 360 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 AKR1B15C9JRZ8 316 aaPredicted RBP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 SLC27A2O14975 620 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 P4HA2O15460 535 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 GPR39O43194 453 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 MICAL2O94851 1124 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 PF4V1P10720 104 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 ZKSCAN1P17029 563 aaPredicted RBP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 TNNT3P45378 269 aaPredicted RBP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 ALDH5A1P51649 535 aaPredicted RBP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 TGFB2P61812 414 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 RAC1P63000 192 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 SLC7A5Q01650 507 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 KCNC4Q03721 635 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 AP3B2Q13367 1082 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 ORC1Q13415 861 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 ANKRD1Q15327 319 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 PTPN21Q16825 1174 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 SHROOM1Q2M3G4 852 aaPredicted RBP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 TMEM67Q5HYA8 995 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 SYDE2Q5VT97 1194 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 CCDC30Q5VVM6 783 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 SYNE3Q6ZMZ3 975 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 EPM2AIP1Q7L775 607 aaPredicted RBP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 CCAR2Q8N163 923 aaKnown RBP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 MYCT1Q8N699 235 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 CNTD1Q8N815 330 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 PPP1R14CQ8TAE6 165 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 FNIP1Q8TF40 1166 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 TRIM11Q96F44 468 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 RMDN2Q96LZ7 410 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 CHCHD6Q9BRQ6 235 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 SLC39A3Q9BRY0 314 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 ISCA1Q9BUE6 129 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 SLC7A5P2Q9GIP4 190 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 IQCGQ9H095 443 aaKnown RBP4.41□□□□□ -1.7
CLHC1-201ENST00000401408 MYLK2Q9H1R3 596 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 RRAGCQ9HB90 399 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 OSGEPQ9NPF4 335 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 ANLNQ9NQW6 1124 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 STARD7Q9NQZ5 370 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 KCNQ5Q9NR82 932 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 ATP6V0A2Q9Y487 856 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 SQORQ9Y6N5 450 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 UNC80Q8N2C7 3258 aa4.41□□□□□ -1.7
CLHC1-201ENST00000401408 TIAM2Q8IVF5 1701 aa4.4□□□□□ -1.7
CLHC1-201ENST00000401408 CENPFP49454 3210 aa4.4□□□□□ -1.7
CLHC1-201ENST00000401408 ITGB4P16144 1822 aa4.4□□□□□ -1.7
CLHC1-201ENST00000401408 A0A087WZG4 1122 aa4.4□□□□□ -1.7
CLHC1-201ENST00000401408 GOLGA6L3A6NEY3 463 aa4.4□□□□□ -1.7
CLHC1-201ENST00000401408 RRN3P2A6NIE6 340 aa4.4□□□□□ -1.7
CLHC1-201ENST00000401408 TMCO5BA8MYB1 307 aa4.4□□□□□ -1.7
CLHC1-201ENST00000401408 F8W031 263 aaPredicted RBP4.4□□□□□ -1.7
CLHC1-201ENST00000401408 C6orf229H3BNL8 230 aa4.4□□□□□ -1.7
CLHC1-201ENST00000401408 INO80B-WBP1J3KQ70 363 aa4.4□□□□□ -1.7
CLHC1-201ENST00000401408 AREL1O15033 823 aa4.4□□□□□ -1.7
CLHC1-201ENST00000401408 KLHL41O60662 606 aa4.4□□□□□ -1.7
CLHC1-201ENST00000401408 MTRF1O75570 445 aaKnown RBP4.4□□□□□ -1.7
CLHC1-201ENST00000401408 CYP17A1P05093 508 aa4.4□□□□□ -1.7
CLHC1-201ENST00000401408 CYP11A1P05108 521 aa4.4□□□□□ -1.7
CLHC1-201ENST00000401408 SLC3A2P08195 630 aaKnown RBP4.4□□□□□ -1.7
CLHC1-201ENST00000401408 PARP1P09874 1014 aaKnown RBP4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms