RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 YWHAHQ04917 246 aaPredicted RBP14.91□□□□□ -0.02
VAPA-202ENST00000400000 SIX6OS1Q8N1H7 587 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 SUFUQ9UMX1 484 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 PCDHA4Q9UN74 947 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 THNSL1Q8IYQ7 743 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 SDCCAG3Q96C92 435 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 SPTLC3Q9NUV7 552 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 IREB2P48200 963 aaKnown RBP14.91□□□□□ -0.02
VAPA-202ENST00000400000 SLC35F6Q8N357 371 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 RNF181Q9P0P0 153 aa14.91□□□□□ -0.02
VAPA-202ENST00000400000 PEX19P40855 299 aa14.9□□□□□ -0.02
VAPA-202ENST00000400000 DCAF4L1Q3SXM0 396 aa14.9□□□□□ -0.02
VAPA-202ENST00000400000 ACBD5Q5T8D3 534 aaPredicted RBP14.9□□□□□ -0.02
VAPA-202ENST00000400000 PUS7LQ9H0K6 701 aaKnown RBP14.9□□□□□ -0.02
VAPA-202ENST00000400000 H2AFZP0C0S5 128 aa14.9□□□□□ -0.02
VAPA-202ENST00000400000 PSMC2P35998 433 aaKnown RBP14.9□□□□□ -0.02
VAPA-202ENST00000400000 H2AFVQ71UI9 128 aa14.9□□□□□ -0.02
VAPA-202ENST00000400000 CDKL2Q92772 493 aa14.9□□□□□ -0.02
VAPA-202ENST00000400000 N4BP1O75113 896 aaKnown RBP14.9□□□□□ -0.02
VAPA-202ENST00000400000 PPFIA2O75334 1257 aa14.9□□□□□ -0.02
VAPA-202ENST00000400000 SLC27A3Q5K4L6 730 aa14.9□□□□□ -0.02
VAPA-202ENST00000400000 GCNAQ96QF7 691 aa14.9□□□□□ -0.02
VAPA-202ENST00000400000 RAVER2Q9HCJ3 691 aaKnown RBP14.9□□□□□ -0.02
VAPA-202ENST00000400000 AFF4Q9UHB7 1163 aaKnown RBP14.9□□□□□ -0.02
VAPA-202ENST00000400000 BMP3P12645 472 aa14.9□□□□□ -0.02
VAPA-202ENST00000400000 GTPBP6O43824 516 aaPredicted RBP14.9□□□□□ -0.02
VAPA-202ENST00000400000 CIAPIN1Q6FI81 312 aa14.9□□□□□ -0.02
VAPA-202ENST00000400000 HIPK4Q8NE63 616 aa14.9□□□□□ -0.02
VAPA-202ENST00000400000 ZNF274Q96GC6 653 aaPredicted RBP14.9□□□□□ -0.02
VAPA-202ENST00000400000 MMTAG2Q9BU76 263 aaKnown RBP14.9□□□□□ -0.02
VAPA-202ENST00000400000 EPB41L5Q9HCM4 733 aa14.9□□□□□ -0.02
VAPA-202ENST00000400000 PMLP29590 882 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 PEX3P56589 373 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 ACCSQ96QU6 501 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 PDE11AQ9HCR9 933 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 SART1O43290 800 aaKnown RBP14.89□□□□□ -0.03
VAPA-202ENST00000400000 SLC12A6Q9UHW9 1150 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 PDE8BO95263 885 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 KITP10721 976 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 TMEM94Q12767 1356 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 NUP153P49790 1475 aaKnown RBP14.89□□□□□ -0.03
VAPA-202ENST00000400000 ARHGEF6Q15052 776 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 KDELC2Q7Z4H8 507 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 SCYL3Q8IZE3 742 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 GOLGA5Q8TBA6 731 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 GPT2Q8TD30 523 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 CAPS2Q9BXY5 557 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 DDAH1O94760 285 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 AFPP02771 609 aaKnown RBP14.89□□□□□ -0.03
VAPA-202ENST00000400000 NOP14P78316 857 aaKnown RBP14.89□□□□□ -0.03
VAPA-202ENST00000400000 KCNA1Q09470 495 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 SOWAHDA6NJG2 315 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 ACCSLQ4AC99 568 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 PPP6R3Q5H9R7 873 aaPredicted RBP14.89□□□□□ -0.03
VAPA-202ENST00000400000 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.89□□□□□ -0.036e-17■■□□□ 11.9
VAPA-202ENST00000400000 PIP4K2CQ8TBX8 421 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 AFG1LQ8WV93 481 aa14.89□□□□□ -0.03
VAPA-202ENST00000400000 A0A1B0GUA9 196 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 MCF2LO15068 1137 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 PFKFB2O60825 505 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 EN1Q05925 392 aaPredicted RBP14.88□□□□□ -0.03
VAPA-202ENST00000400000 SLMAPQ14BN4 828 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 DNAJC24Q6P3W2 148 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 POTEDQ86YR6 584 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 RPF1Q9H9Y2 349 aaKnown RBP14.88□□□□□ -0.03
VAPA-202ENST00000400000 SUCLA2Q9P2R7 463 aaPredicted RBP14.88□□□□□ -0.03
VAPA-202ENST00000400000 EPN1Q9Y6I3 576 aaPredicted RBP14.88□□□□□ -0.03
VAPA-202ENST00000400000 UGGT2Q9NYU1 1516 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 APOEP02649 317 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 CYP2D6P10635 497 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 MECOMQ03112 1051 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 LRRC8AQ8IWT6 810 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 C2orf69Q8N8R5 385 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 TDRD3Q9H7E2 651 aaKnown RBP14.88□□□□□ -0.03
VAPA-202ENST00000400000 BCL2L12Q9HB09 334 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 PASKQ96RG2 1323 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 ABCC10Q5T3U5 1492 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 ESRRBO95718 433 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 HADHAP40939 763 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 ATP6V0A1Q93050 837 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 ZHX2Q9Y6X8 837 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 PPFIA4O75335 1185 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 PCCAP05165 728 aaPredicted RBP14.88□□□□□ -0.03
VAPA-202ENST00000400000 SRGAP2BP0DMP2 458 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 WDR48Q8TAF3 677 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 DBNLQ9UJU6 430 aaKnown RBP14.88□□□□□ -0.03
VAPA-202ENST00000400000 EFCAB8A8MWE9 144 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 HDLBPQ00341 1268 aaKnown RBP14.88□□□□□ -0.03
VAPA-202ENST00000400000 CDC37Q16543 378 aaPredicted RBP14.88□□□□□ -0.03
VAPA-202ENST00000400000 TRIM67Q6ZTA4 783 aa14.88□□□□□ -0.03
VAPA-202ENST00000400000 SH3RF3Q8TEJ3 882 aaPredicted RBP14.88□□□□□ -0.03
VAPA-202ENST00000400000 TTC4O95801 387 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 PLS3P13797 630 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 CASP1P29466 404 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 PPP2R5BQ15173 497 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 SYCP2LQ5T4T6 812 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 FAM117BQ6P1L5 589 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 BBS5Q8N3I7 341 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 MYL1P05976 194 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 TUBBP07437 444 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms