RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 ATP1A3P13637 1013 aa12.17□□□□□ -0.46
LAMA3-203ENST00000399516 TRAIPQ9BWF2 469 aa12.17□□□□□ -0.46
LAMA3-203ENST00000399516 LRRIQ4A6NIV6 560 aa12.17□□□□□ -0.46
LAMA3-203ENST00000399516 FGGP02679 453 aa12.17□□□□□ -0.46
LAMA3-203ENST00000399516 GYS2P54840 703 aa12.17□□□□□ -0.46
LAMA3-203ENST00000399516 PABPC4Q13310 644 aaKnown RBP eCLIP12.17□□□□□ -0.46
LAMA3-203ENST00000399516 GLE1Q53GS7 698 aaKnown RBP12.17□□□□□ -0.46
LAMA3-203ENST00000399516 BPIFA3Q9BQP9 254 aa12.17□□□□□ -0.46
LAMA3-203ENST00000399516 POLR1AO95602 1720 aaPredicted RBP12.17□□□□□ -0.46
LAMA3-203ENST00000399516 GSTA4O15217 222 aa12.17□□□□□ -0.46
LAMA3-203ENST00000399516 LMNAP02545 664 aaKnown RBP12.17□□□□□ -0.46
LAMA3-203ENST00000399516 PCCAP05165 728 aaPredicted RBP12.17□□□□□ -0.46
LAMA3-203ENST00000399516 KRT80Q6KB66 452 aa12.17□□□□□ -0.46
LAMA3-203ENST00000399516 SMCR8Q8TEV9 937 aaPredicted RBP12.17□□□□□ -0.46
LAMA3-203ENST00000399516 LRRC41Q15345 812 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 DYNLT1P63172 113 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 HDLBPQ00341 1268 aaKnown RBP12.16□□□□□ -0.46
LAMA3-203ENST00000399516 CYP27A1Q02318 531 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 TMEM232C9JQI7 657 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 KCNQ3O43525 872 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 NBPF9Q3BBW0 867 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 TMEM60Q9H2L4 133 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 FGFR1OP2Q9NVK5 253 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 BASP1P80723 227 aaKnown RBP12.16□□□□□ -0.46
LAMA3-203ENST00000399516 MAPK13O15264 365 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 TBC1D1Q86TI0 1168 aaPredicted RBP12.16□□□□□ -0.46
LAMA3-203ENST00000399516 MCUQ8NE86 351 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 RASGRP4Q8TDF6 673 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 SERPINI1Q99574 410 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 ADAM21Q9UKJ8 722 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 KDM6BO15054 1643 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 ALAS1P13196 640 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 HOXA7P31268 230 aaPredicted RBP12.16□□□□□ -0.46
LAMA3-203ENST00000399516 ASPRV1Q53RT3 343 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 LARGE2Q8N3Y3 721 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 PLCG1P19174 1290 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 FKBP3Q00688 224 aaKnown RBP12.16□□□□□ -0.46
LAMA3-203ENST00000399516 PDCLQ13371 301 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 KCTD6Q8NC69 237 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 CDK12Q9NYV4 1490 aaPredicted RBP12.16□□□□□ -0.46
LAMA3-203ENST00000399516 GNGT2O14610 69 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 FOSP01100 380 aaPredicted RBP12.16□□□□□ -0.46
LAMA3-203ENST00000399516 KPNA2P52292 529 aaKnown RBP12.16□□□□□ -0.46
LAMA3-203ENST00000399516 CHRNDQ07001 517 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 KMT5BQ4FZB7 885 aa12.16□□□□□ -0.46
LAMA3-203ENST00000399516 SPAG7O75391 227 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 NR5A1Q13285 461 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 SUPT20HQ8NEM7 779 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 ACCSQ96QU6 501 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 PALM3A6NDB9 673 aaPredicted RBP12.15□□□□□ -0.46
LAMA3-203ENST00000399516 PHKA1P46020 1223 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 DEUP1Q05D60 604 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 EEF1B2P24534 225 aaKnown RBP12.15□□□□□ -0.46
LAMA3-203ENST00000399516 RPS8P62241 208 aaKnown RBP12.15□□□□□ -0.46
LAMA3-203ENST00000399516 DNAJC24Q6P3W2 148 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 DARS2Q6PI48 645 aaKnown RBP12.15□□□□□ -0.46
LAMA3-203ENST00000399516 SKA2Q8WVK7 121 aaPredicted RBP12.15□□□□□ -0.46
LAMA3-203ENST00000399516 CACNB1Q02641 598 aaPredicted RBP12.15□□□□□ -0.46
LAMA3-203ENST00000399516 UBE2TQ9NPD8 197 aaPredicted RBP12.15□□□□□ -0.46
LAMA3-203ENST00000399516 CREB3O43889 395 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 EEF1DP29692 281 aaKnown RBP12.15□□□□□ -0.46
LAMA3-203ENST00000399516 ARID5BQ14865 1188 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 SPOPLQ6IQ16 392 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 SESTD1Q86VW0 696 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 IL17REQ8NFR9 667 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 NRBF2Q96F24 287 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 FAM81BQ96LP2 452 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 ADPGKQ9BRR6 497 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 LRRC63Q05C16 580 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 ATG16L1Q676U5 607 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 DEPDC1BQ8WUY9 529 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 GPR108Q9NPR9 543 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 LARGE1O95461 756 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 DDIT3P35638 169 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 CCDC24Q8N4L8 307 aa12.15□□□□□ -0.46
LAMA3-203ENST00000399516 CERKLQ49MI3 558 aaPredicted RBP12.15□□□□□ -0.47
LAMA3-203ENST00000399516 SUGCTQ9HAC7 445 aa12.15□□□□□ -0.47
LAMA3-203ENST00000399516 MLXIPQ9HAP2 919 aa12.15□□□□□ -0.47
LAMA3-203ENST00000399516 ARHGAP31Q2M1Z3 1444 aa12.15□□□□□ -0.47
LAMA3-203ENST00000399516 IQANK1A0A1B0GTG1 560 aa12.14□□□□□ -0.47
LAMA3-203ENST00000399516 PSMD2Q13200 908 aa12.14□□□□□ -0.47
LAMA3-203ENST00000399516 FAM160B1Q5W0V3 765 aa12.14□□□□□ -0.47
LAMA3-203ENST00000399516 PNMA2Q9UL42 364 aa12.14□□□□□ -0.47
LAMA3-203ENST00000399516 SRPRBQ9Y5M8 271 aaKnown RBP12.14□□□□□ -0.47
LAMA3-203ENST00000399516 CEP170Q5SW79 1584 aa12.14□□□□□ -0.47
LAMA3-203ENST00000399516 CCDC124Q96CT7 223 aaKnown RBP12.14□□□□□ -0.47
LAMA3-203ENST00000399516 NDST4Q9H3R1 872 aa12.14□□□□□ -0.47
LAMA3-203ENST00000399516 PCDHB6Q9Y5E3 794 aa12.14□□□□□ -0.47
LAMA3-203ENST00000399516 AATKQ6ZMQ8 1374 aa12.14□□□□□ -0.47
LAMA3-203ENST00000399516 ARHGEF25Q86VW2 580 aa12.14□□□□□ -0.47
LAMA3-203ENST00000399516 TRIM15Q9C019 465 aa12.14□□□□□ -0.47
LAMA3-203ENST00000399516 YY1AP1Q9H869 796 aa12.14□□□□□ -0.47
LAMA3-203ENST00000399516 SPDYE16A6NNV3 312 aaPredicted RBP12.14□□□□□ -0.47
LAMA3-203ENST00000399516 GCFC2P16383 781 aaKnown RBP12.14□□□□□ -0.47
LAMA3-203ENST00000399516 SPDYE2Q495Y8 402 aa12.14□□□□□ -0.47
LAMA3-203ENST00000399516 ABHD10Q9NUJ1 306 aa12.14□□□□□ -0.47
LAMA3-203ENST00000399516 SYNGAP1Q96PV0 1343 aa12.14□□□□□ -0.47
LAMA3-203ENST00000399516 CA4P22748 312 aa12.14□□□□□ -0.47
LAMA3-203ENST00000399516 ART3Q13508 389 aa12.14□□□□□ -0.47
LAMA3-203ENST00000399516 TFDP1Q14186 410 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms