RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 NOC3LQ8WTT2 800 aaKnown RBP13.08□□□□□ -0.32
COL25A1-202ENST00000399127 CCDC51Q96ER9 411 aa13.08□□□□□ -0.32
COL25A1-202ENST00000399127 TRERF1Q96PN7 1200 aa13.08□□□□□ -0.32
COL25A1-202ENST00000399127 NAP1L4Q99733 375 aaKnown RBP13.08□□□□□ -0.32
COL25A1-202ENST00000399127 SLF1Q9BQI6 1058 aa13.08□□□□□ -0.32
COL25A1-202ENST00000399127 PANK4Q9NVE7 773 aa13.08□□□□□ -0.32
COL25A1-202ENST00000399127 FEZ2Q9UHY8 353 aaPredicted RBP13.08□□□□□ -0.32
COL25A1-202ENST00000399127 LOC102724159A0A0B4J2E5 919 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 GOLGA6L9A6NEM1 432 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 ERICH4A6NGS2 130 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 FZD9O00144 591 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 TRIM21P19474 475 aaKnown RBP13.07□□□□□ -0.32
COL25A1-202ENST00000399127 SREBF1P36956 1147 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 DNM2P50570 870 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 SPIRE1Q08AE8 756 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 PWP2Q15269 919 aaKnown RBP13.07□□□□□ -0.32
COL25A1-202ENST00000399127 ERCC6LQ2NKX8 1250 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 MIIPQ5JXC2 388 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 CATSPER3Q86XQ3 398 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 SLFN12Q8IYM2 578 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 MTMR14Q8NCE2 650 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 ERO1AQ96HE7 468 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 MBOAT7Q96N66 472 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 NT5C3AQ9H0P0 336 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 EFCC1Q9HA90 598 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 POLD4Q9HCU8 107 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 AGPAT5Q9NUQ2 364 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 LUC7L2Q9Y383 392 aaKnown RBP13.07□□□□□ -0.32
COL25A1-202ENST00000399127 KDM3AQ9Y4C1 1321 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 MSH4O15457 936 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 RPS12P25398 132 aaKnown RBP13.07□□□□□ -0.32
COL25A1-202ENST00000399127 CASQ1P31415 396 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 FAM193AP78312 1265 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 TRIM14Q14142 442 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 CYP26C1Q6V0L0 522 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 TMTC1Q8IUR5 882 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 GPIHBP1Q8IV16 184 aa13.07□□□□□ -0.32
COL25A1-202ENST00000399127 GUF1Q8N442 669 aaKnown RBP13.07□□□□□ -0.32
COL25A1-202ENST00000399127 ASTN2O75129 1339 aaPredicted RBP13.07□□□□□ -0.32
COL25A1-202ENST00000399127 A0A1W2PQC6 194 aa13.06□□□□□ -0.32
COL25A1-202ENST00000399127 TUBB4AP04350 444 aa13.06□□□□□ -0.32
COL25A1-202ENST00000399127 KRT18P05783 430 aaKnown RBP13.06□□□□□ -0.32
COL25A1-202ENST00000399127 EHHADHQ08426 723 aa13.06□□□□□ -0.32
COL25A1-202ENST00000399127 PABPC4Q13310 644 aaKnown RBP eCLIP13.06□□□□□ -0.32
COL25A1-202ENST00000399127 DGKZQ13574 1117 aa13.06□□□□□ -0.32
COL25A1-202ENST00000399127 FAM114A1Q8IWE2 563 aa13.06□□□□□ -0.32
COL25A1-202ENST00000399127 NELFCDQ8IXH7 590 aa13.06□□□□□ -0.32
COL25A1-202ENST00000399127 BMP2KQ9NSY1 1161 aaPredicted RBP13.06□□□□□ -0.32
COL25A1-202ENST00000399127 RASSF10A6NK89 507 aa13.06□□□□□ -0.32
COL25A1-202ENST00000399127 FOSP01100 380 aaPredicted RBP13.06□□□□□ -0.32
COL25A1-202ENST00000399127 CAP2P40123 477 aa13.06□□□□□ -0.32
COL25A1-202ENST00000399127 RASA3Q14644 834 aa13.06□□□□□ -0.32
COL25A1-202ENST00000399127 HERC4Q5GLZ8 1057 aaPredicted RBP13.06□□□□□ -0.32
COL25A1-202ENST00000399127 FAM26FQ5R3K3 315 aa13.06□□□□□ -0.32
COL25A1-202ENST00000399127 HYIQ5T013 277 aa13.06□□□□□ -0.32
COL25A1-202ENST00000399127 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.06□□□□□ -0.32
COL25A1-202ENST00000399127 MYOCDQ8IZQ8 938 aa13.06□□□□□ -0.32
COL25A1-202ENST00000399127 OR8K1Q8NGG5 319 aa13.06□□□□□ -0.32
COL25A1-202ENST00000399127 LRRC27Q9C0I9 530 aa13.06□□□□□ -0.32
COL25A1-202ENST00000399127 VCPKMTQ9H867 229 aa13.06□□□□□ -0.32
COL25A1-202ENST00000399127 CYP11B2P19099 503 aa13.05□□□□□ -0.32
COL25A1-202ENST00000399127 PPP1R2P41236 205 aa13.05□□□□□ -0.32
COL25A1-202ENST00000399127 ZNF280AP59817 542 aaPredicted RBP13.05□□□□□ -0.32
COL25A1-202ENST00000399127 Q4G0T1 1027 aa13.05□□□□□ -0.32
COL25A1-202ENST00000399127 ARHGAP29Q52LW3 1261 aa13.05□□□□□ -0.32
COL25A1-202ENST00000399127 COBLL1Q53SF7 1204 aa13.05□□□□□ -0.32
COL25A1-202ENST00000399127 ARSHQ5FYA8 562 aa13.05□□□□□ -0.32
COL25A1-202ENST00000399127 ZBED3Q96IU2 234 aaPredicted RBP13.05□□□□□ -0.32
COL25A1-202ENST00000399127 CARD6Q9BX69 1037 aa13.05□□□□□ -0.32
COL25A1-202ENST00000399127 TFR2Q9UP52 801 aa13.05□□□□□ -0.32
COL25A1-202ENST00000399127 CHMP2AO43633 222 aa13.05□□□□□ -0.32
COL25A1-202ENST00000399127 SPATA31C1P0DKV0 1188 aa13.05□□□□□ -0.32
COL25A1-202ENST00000399127 FECHP22830 423 aa13.05□□□□□ -0.32
COL25A1-202ENST00000399127 KIF4BQ2VIQ3 1234 aa13.05□□□□□ -0.32
COL25A1-202ENST00000399127 WDR59Q6PJI9 974 aa13.05□□□□□ -0.32
COL25A1-202ENST00000399127 MOXD1Q6UVY6 613 aa13.05□□□□□ -0.32
COL25A1-202ENST00000399127 ZNF341Q9BYN7 854 aa13.05□□□□□ -0.32
COL25A1-202ENST00000399127 RGL1Q9NZL6 768 aa13.05□□□□□ -0.32
COL25A1-202ENST00000399127 CAPN11Q9UMQ6 739 aa13.05□□□□□ -0.32
COL25A1-202ENST00000399127 EML1O00423 815 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 LMNB1P20700 586 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 HAUS3Q68CZ6 603 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 LRRC55Q6ZSA7 311 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 FAM83AQ86UY5 434 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 CCDC155Q8N6L0 562 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 DNAJC7Q99615 494 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 SYT17Q9BSW7 474 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 WDR18Q9BV38 432 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 FAM207AQ9NSI2 230 aaPredicted RBP13.04□□□□□ -0.32
COL25A1-202ENST00000399127 TRAF5O00463 557 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 TNNT3P45378 269 aaPredicted RBP13.04□□□□□ -0.32
COL25A1-202ENST00000399127 SLC12A3P55017 1021 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 PSMD2Q13200 908 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 TSR1Q2NL82 804 aaKnown RBP13.04□□□□□ -0.32
COL25A1-202ENST00000399127 ZNF569Q5MCW4 686 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 FKBP15Q5T1M5 1219 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 FKBP1CQ5VVH2 108 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 MNS1Q8NEH6 495 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 CHURC1Q8WUH1 139 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 TTYH3Q9C0H2 523 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms