RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 DDX12PQ92771 950 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 FAM20AQ96MK3 541 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 TAAR1Q96RJ0 339 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 EXOC1Q9NV70 894 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 PKD2L1Q9P0L9 805 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 TMCO4Q5TGY1 634 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 CDKAL1Q5VV42 579 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 NSMFQ6X4W1 530 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 ELP3Q9H9T3 547 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 SLC39A2Q9NP94 309 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 RGL1Q9NZL6 768 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 RWDD2AQ9UIY3 292 aa16.9■□□□□ 0.3
COL25A1-201ENST00000399126 C19orf81C9J6K1 198 aa16.89■□□□□ 0.29
COL25A1-201ENST00000399126 IDEP14735 1019 aa16.89■□□□□ 0.29
COL25A1-201ENST00000399126 EIF2AK2P19525 551 aaKnown RBP16.89■□□□□ 0.29
COL25A1-201ENST00000399126 DSG3P32926 999 aa16.89■□□□□ 0.29
COL25A1-201ENST00000399126 AMPD3Q01432 767 aa16.89■□□□□ 0.29
COL25A1-201ENST00000399126 GOLGA8FQ08AF8 430 aa16.89■□□□□ 0.29
COL25A1-201ENST00000399126 GOLGA8DPQ0D2H9 430 aa16.89■□□□□ 0.29
COL25A1-201ENST00000399126 TMEM132BQ14DG7 1078 aa16.89■□□□□ 0.29
COL25A1-201ENST00000399126 EAPPQ56P03 285 aaPredicted RBP16.89■□□□□ 0.29
COL25A1-201ENST00000399126 SNRNP48Q6IEG0 339 aaKnown RBP16.89■□□□□ 0.29
COL25A1-201ENST00000399126 CATSPERGQ6ZRH7 1159 aa16.89■□□□□ 0.29
COL25A1-201ENST00000399126 CDCA5Q96FF9 252 aa16.89■□□□□ 0.29
COL25A1-201ENST00000399126 L3MBTL3Q96JM7 780 aaPredicted RBP16.89■□□□□ 0.29
COL25A1-201ENST00000399126 RNF146Q9NTX7 359 aa16.89■□□□□ 0.29
COL25A1-201ENST00000399126 ZNF214Q9UL59 606 aaPredicted RBP16.89■□□□□ 0.29
COL25A1-201ENST00000399126 RPTORQ8N122 1335 aa16.89■□□□□ 0.29
COL25A1-201ENST00000399126 KDM3AQ9Y4C1 1321 aa16.89■□□□□ 0.29
COL25A1-201ENST00000399126 ZNF500O60304 480 aaPredicted RBP16.89■□□□□ 0.29
COL25A1-201ENST00000399126 IRX5P78411 483 aaPredicted RBP16.89■□□□□ 0.29
COL25A1-201ENST00000399126 LRCH2Q5VUJ6 765 aa16.89■□□□□ 0.29
COL25A1-201ENST00000399126 TMOD4Q9NZQ9 345 aa16.89■□□□□ 0.29
COL25A1-201ENST00000399126 PSMD10O75832 226 aa16.88■□□□□ 0.29
COL25A1-201ENST00000399126 PLA2G4BP0C869 781 aa16.88■□□□□ 0.29
COL25A1-201ENST00000399126 CT47A1Q5JQC4 288 aaPredicted RBP16.88■□□□□ 0.29
COL25A1-201ENST00000399126 OTOP1Q7RTM1 612 aa16.88■□□□□ 0.29
COL25A1-201ENST00000399126 LRRC8AQ8IWT6 810 aa16.88■□□□□ 0.29
COL25A1-201ENST00000399126 DNAJC19Q96DA6 116 aa16.88■□□□□ 0.29
COL25A1-201ENST00000399126 WDR11Q9BZH6 1224 aa16.88■□□□□ 0.29
COL25A1-201ENST00000399126 PPP1R12BO60237 982 aaPredicted RBP16.88■□□□□ 0.29
COL25A1-201ENST00000399126 POTEJP0CG39 1038 aa16.88■□□□□ 0.29
COL25A1-201ENST00000399126 MRPS9P82933 396 aaKnown RBP16.88■□□□□ 0.29
COL25A1-201ENST00000399126 COG2Q14746 738 aa16.88■□□□□ 0.29
COL25A1-201ENST00000399126 TPD52L1Q16890 204 aaPredicted RBP16.88■□□□□ 0.29
COL25A1-201ENST00000399126 MCF2L2Q86YR7 1114 aa16.88■□□□□ 0.29
COL25A1-201ENST00000399126 OTUD5Q96G74 571 aa16.88■□□□□ 0.29
COL25A1-201ENST00000399126 NT5C3AQ9H0P0 336 aa16.88■□□□□ 0.29
COL25A1-201ENST00000399126 ADAMTS5Q9UNA0 930 aa16.88■□□□□ 0.29
COL25A1-201ENST00000399126 SPDYE16A6NNV3 312 aaPredicted RBP16.87■□□□□ 0.29
COL25A1-201ENST00000399126 DDX39AO00148 427 aaKnown RBP16.87■□□□□ 0.29
COL25A1-201ENST00000399126 IRF6O14896 467 aa16.87■□□□□ 0.29
COL25A1-201ENST00000399126 TEX33O43247 280 aa16.87■□□□□ 0.29
COL25A1-201ENST00000399126 PABPC4Q13310 644 aaKnown RBP eCLIP16.87■□□□□ 0.29
COL25A1-201ENST00000399126 ARMCX5Q6P1M9 558 aa16.87■□□□□ 0.29
COL25A1-201ENST00000399126 RNF207Q6ZRF8 634 aa16.87■□□□□ 0.29
COL25A1-201ENST00000399126 CREBRFQ8IUR6 639 aa16.87■□□□□ 0.29
COL25A1-201ENST00000399126 SLC5A5Q92911 643 aa16.87■□□□□ 0.29
COL25A1-201ENST00000399126 EIF2AK1Q9BQI3 630 aaKnown RBP16.87■□□□□ 0.29
COL25A1-201ENST00000399126 ZNF577Q9BSK1 485 aa16.87■□□□□ 0.29
COL25A1-201ENST00000399126 EHMT1Q9H9B1 1298 aa16.87■□□□□ 0.29
COL25A1-201ENST00000399126 CSADQ9Y600 493 aa16.87■□□□□ 0.29
COL25A1-201ENST00000399126 RPA1P27694 616 aa16.87■□□□□ 0.29
COL25A1-201ENST00000399126 GHRHRQ02643 423 aa16.87■□□□□ 0.29
COL25A1-201ENST00000399126 BAATQ14032 418 aaPredicted RBP16.87■□□□□ 0.29
COL25A1-201ENST00000399126 CTTNQ14247 550 aaKnown RBP16.87■□□□□ 0.29
COL25A1-201ENST00000399126 HAUS3Q68CZ6 603 aa16.87■□□□□ 0.29
COL25A1-201ENST00000399126 UNC13DQ70J99 1090 aa16.87■□□□□ 0.29
COL25A1-201ENST00000399126 VSTM4Q8IW00 320 aa16.87■□□□□ 0.29
COL25A1-201ENST00000399126 KIAA1524Q8TCG1 905 aa16.87■□□□□ 0.29
COL25A1-201ENST00000399126 FGFBP2Q9BYJ0 223 aa16.87■□□□□ 0.29
COL25A1-201ENST00000399126 POLD4Q9HCU8 107 aa16.87■□□□□ 0.29
COL25A1-201ENST00000399126 GLTPD2A6NH11 291 aa16.86■□□□□ 0.29
COL25A1-201ENST00000399126 ZBTB39O15060 712 aa16.86■□□□□ 0.29
COL25A1-201ENST00000399126 TPM3P06753 285 aa16.86■□□□□ 0.29
COL25A1-201ENST00000399126 CBX1P83916 185 aa16.86■□□□□ 0.29
COL25A1-201ENST00000399126 PLS1Q14651 629 aa16.86■□□□□ 0.29
COL25A1-201ENST00000399126 LRRC41Q15345 812 aa16.86■□□□□ 0.29
COL25A1-201ENST00000399126 ARSHQ5FYA8 562 aa16.86■□□□□ 0.29
COL25A1-201ENST00000399126 USP50Q70EL3 339 aaPredicted RBP16.86■□□□□ 0.29
COL25A1-201ENST00000399126 GPBP1Q86WP2 473 aa16.86■□□□□ 0.29
COL25A1-201ENST00000399126 IRF2BP1Q8IU81 584 aa16.86■□□□□ 0.29
COL25A1-201ENST00000399126 MXRA8Q9BRK3 442 aa16.86■□□□□ 0.29
COL25A1-201ENST00000399126 CBFA2T2O43439 604 aa16.86■□□□□ 0.29
COL25A1-201ENST00000399126 GAS7O60861 476 aa16.86■□□□□ 0.29
COL25A1-201ENST00000399126 SLC12A3P55017 1021 aa16.86■□□□□ 0.29
COL25A1-201ENST00000399126 TTLL12Q14166 644 aaPredicted RBP16.86■□□□□ 0.29
COL25A1-201ENST00000399126 UNC45AQ9H3U1 944 aa16.86■□□□□ 0.29
COL25A1-201ENST00000399126 BCAS3Q9H6U6 928 aa16.86■□□□□ 0.29
COL25A1-201ENST00000399126 KCNH7Q9NS40 1196 aa16.86■□□□□ 0.29
COL25A1-201ENST00000399126 TBC1D7Q9P0N9 293 aa16.86■□□□□ 0.29
COL25A1-201ENST00000399126 IPO5O00410 1097 aaKnown RBP16.85■□□□□ 0.29
COL25A1-201ENST00000399126 MYCLP12524 364 aaPredicted RBP16.85■□□□□ 0.29
COL25A1-201ENST00000399126 CYP11B2P19099 503 aa16.85■□□□□ 0.29
COL25A1-201ENST00000399126 TTI2Q6NXR4 508 aa16.85■□□□□ 0.29
COL25A1-201ENST00000399126 ERMNQ8TAM6 284 aa16.85■□□□□ 0.29
COL25A1-201ENST00000399126 RMDN3Q96TC7 470 aa16.85■□□□□ 0.29
COL25A1-201ENST00000399126 TAF1DQ9H5J8 278 aaPredicted RBP16.85■□□□□ 0.29
COL25A1-201ENST00000399126 WRAP73Q9P2S5 460 aaPredicted RBP16.85■□□□□ 0.29
COL25A1-201ENST00000399126 A0A1B0GTH6 734 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms