RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 MYSM1Q5VVJ2 828 aa14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 FAM173BQ6P4H8 233 aa14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 KCNV1Q6PIU1 500 aa14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 HAS1Q92839 578 aa14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 EMID1Q96A84 441 aaPredicted RBP14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 SENP7Q9BQF6 1050 aa14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 TMEM60Q9H2L4 133 aa14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 KCNMB3Q9NPA1 279 aa14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 DDX25Q9UHL0 483 aaKnown RBP14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 Q9Y3F1 56 aa14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 PCDHB6Q9Y5E3 794 aa14.09□□□□□ -0.15
HLA-DQB1-203ENST00000399082 MAFGO15525 162 aa14.08□□□□□ -0.16
HLA-DQB1-203ENST00000399082 BRD1O95696 1058 aa14.08□□□□□ -0.16
HLA-DQB1-203ENST00000399082 GH1P01241 217 aa14.08□□□□□ -0.16
HLA-DQB1-203ENST00000399082 CST5P28325 142 aaPredicted RBP14.08□□□□□ -0.16
HLA-DQB1-203ENST00000399082 TRAPPC10P48553 1259 aa14.08□□□□□ -0.16
HLA-DQB1-203ENST00000399082 BEX3Q00994 111 aa14.08□□□□□ -0.16
HLA-DQB1-203ENST00000399082 GNL2Q13823 731 aaKnown RBP14.08□□□□□ -0.16
HLA-DQB1-203ENST00000399082 LRRC41Q15345 812 aa14.08□□□□□ -0.16
HLA-DQB1-203ENST00000399082 HSDL1Q3SXM5 330 aa14.08□□□□□ -0.16
HLA-DQB1-203ENST00000399082 TTC38Q5R3I4 469 aa14.08□□□□□ -0.16
HLA-DQB1-203ENST00000399082 CYFIP1Q7L576 1253 aa14.08□□□□□ -0.16
HLA-DQB1-203ENST00000399082 C4orf32Q8N8J7 132 aa14.08□□□□□ -0.16
HLA-DQB1-203ENST00000399082 OR6J1Q8NGC5 347 aa14.08□□□□□ -0.16
HLA-DQB1-203ENST00000399082 SLC5A5Q92911 643 aa14.08□□□□□ -0.16
HLA-DQB1-203ENST00000399082 CDHR1Q96JP9 859 aa14.08□□□□□ -0.16
HLA-DQB1-203ENST00000399082 NFASCO94856 1347 aa14.08□□□□□ -0.16
HLA-DQB1-203ENST00000399082 A6NJR5 290 aa14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 IPO5O00410 1097 aaKnown RBP14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 CCNE2O96020 404 aa14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 ZSCAN22P10073 491 aaPredicted RBP14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 HOXD8P13378 290 aaPredicted RBP14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 EN2P19622 333 aaPredicted RBP14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 ZNF174Q15697 407 aa14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 FOXD4L5Q5VV16 416 aaPredicted RBP14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 METTL7BQ6UX53 244 aa14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 B3GNT9Q6UX72 402 aa14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 BRAPQ7Z569 592 aa14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 DHX37Q8IY37 1157 aaKnown RBP14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 DIS3LQ8TF46 1054 aaKnown RBP14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 AFG1LQ8WV93 481 aa14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 FOXD4L4Q8WXT5 416 aaPredicted RBP14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 MTMR9Q96QG7 549 aa14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 ZNF577Q9BSK1 485 aa14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 FTOQ9C0B1 505 aaKnown RBP eCLIP14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.07□□□□□ -0.16
HLA-DQB1-203ENST00000399082 NEMFO60524 1076 aa14.06□□□□□ -0.16
HLA-DQB1-203ENST00000399082 PSMD10O75832 226 aa14.06□□□□□ -0.16
HLA-DQB1-203ENST00000399082 F13A1P00488 732 aa14.06□□□□□ -0.16
HLA-DQB1-203ENST00000399082 MMP3P08254 477 aa14.06□□□□□ -0.16
HLA-DQB1-203ENST00000399082 C6orf222P0C671 652 aaPredicted RBP14.06□□□□□ -0.16
HLA-DQB1-203ENST00000399082 MCM7P33993 719 aa14.06□□□□□ -0.16
HLA-DQB1-203ENST00000399082 SOX10P56693 466 aa14.06□□□□□ -0.16
HLA-DQB1-203ENST00000399082 LAMC2Q13753 1193 aa14.06□□□□□ -0.16
HLA-DQB1-203ENST00000399082 NEDD9Q14511 834 aa14.06□□□□□ -0.16
HLA-DQB1-203ENST00000399082 UBE2Q1Q7Z7E8 422 aa14.06□□□□□ -0.16
HLA-DQB1-203ENST00000399082 PPTC7Q8NI37 304 aa14.06□□□□□ -0.16
HLA-DQB1-203ENST00000399082 GPR20Q99678 358 aa14.06□□□□□ -0.16
HLA-DQB1-203ENST00000399082 NAP1L4Q99733 375 aaKnown RBP14.06□□□□□ -0.16
HLA-DQB1-203ENST00000399082 AP5M1Q9H0R1 490 aa14.06□□□□□ -0.16
HLA-DQB1-203ENST00000399082 VAV3Q9UKW4 847 aa14.06□□□□□ -0.16
HLA-DQB1-203ENST00000399082 NOL7Q9UMY1 257 aaKnown RBP14.06□□□□□ -0.16
HLA-DQB1-203ENST00000399082 GSTTP1A0A1W2PQM5 241 aa14.05□□□□□ -0.16
HLA-DQB1-203ENST00000399082 TBX3O15119 743 aa14.05□□□□□ -0.16
HLA-DQB1-203ENST00000399082 TFRCP02786 760 aaKnown RBP14.05□□□□□ -0.16
HLA-DQB1-203ENST00000399082 SPIRE1Q08AE8 756 aa14.05□□□□□ -0.16
HLA-DQB1-203ENST00000399082 KCNA10Q16322 511 aa14.05□□□□□ -0.16
HLA-DQB1-203ENST00000399082 FSCN1Q16658 493 aaKnown RBP14.05□□□□□ -0.16
HLA-DQB1-203ENST00000399082 RILPL1Q5EBL4 403 aa14.05□□□□□ -0.16
HLA-DQB1-203ENST00000399082 CHAMP1Q96JM3 812 aa14.05□□□□□ -0.16
HLA-DQB1-203ENST00000399082 SPATA33Q96N06 139 aa14.05□□□□□ -0.16
HLA-DQB1-203ENST00000399082 RIT2Q99578 217 aa14.05□□□□□ -0.16
HLA-DQB1-203ENST00000399082 TMEM106CQ9BVX2 250 aa14.05□□□□□ -0.16
HLA-DQB1-203ENST00000399082 ZSCAN16Q9H4T2 348 aaPredicted RBP14.05□□□□□ -0.16
HLA-DQB1-203ENST00000399082 JPH1Q9HDC5 661 aaPredicted RBP14.05□□□□□ -0.16
HLA-DQB1-203ENST00000399082 WDR81Q562E7 1941 aa14.05□□□□□ -0.16
HLA-DQB1-203ENST00000399082 SCN10AQ9Y5Y9 1956 aa14.05□□□□□ -0.16
HLA-DQB1-203ENST00000399082 CCDC85CA6NKD9 419 aa14.04□□□□□ -0.16
HLA-DQB1-203ENST00000399082 DDX39AO00148 427 aaKnown RBP14.04□□□□□ -0.16
HLA-DQB1-203ENST00000399082 DNM1LO00429 736 aa14.04□□□□□ -0.16
HLA-DQB1-203ENST00000399082 COL6A1P12109 1028 aa14.04□□□□□ -0.16
HLA-DQB1-203ENST00000399082 SP4Q02446 784 aa14.04□□□□□ -0.16
HLA-DQB1-203ENST00000399082 ORC2Q13416 577 aaPredicted RBP14.04□□□□□ -0.16
HLA-DQB1-203ENST00000399082 CALCRLQ16602 461 aa14.04□□□□□ -0.16
HLA-DQB1-203ENST00000399082 GNASQ5JWF2 1037 aa14.04□□□□□ -0.16
HLA-DQB1-203ENST00000399082 GIMAP8Q8ND71 665 aaPredicted RBP14.04□□□□□ -0.16
HLA-DQB1-203ENST00000399082 USP28Q96RU2 1077 aa14.04□□□□□ -0.16
HLA-DQB1-203ENST00000399082 PCYT2Q99447 389 aa14.04□□□□□ -0.16
HLA-DQB1-203ENST00000399082 UNC45AQ9H3U1 944 aa14.04□□□□□ -0.16
HLA-DQB1-203ENST00000399082 MLXIPQ9HAP2 919 aa14.04□□□□□ -0.16
HLA-DQB1-203ENST00000399082 SLC9A2Q9UBY0 812 aa14.04□□□□□ -0.16
HLA-DQB1-203ENST00000399082 PHF24Q9UPV7 400 aa14.04□□□□□ -0.16
HLA-DQB1-203ENST00000399082 EML1O00423 815 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 ATG7O95352 703 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 ASGR1P07306 291 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 PDIA4P13667 645 aaKnown RBP14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 CPT1AP50416 773 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 ACLYP53396 1101 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 ACTR2P61160 394 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 PURAQ00577 322 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms