RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 A0A1W2PQ45 241 aaPredicted RBP11.87□□□□□ -0.51
CYCSP55-201ENST00000399027 A0A1W2PQY0 241 aa11.87□□□□□ -0.51
CYCSP55-201ENST00000399027 FAM205CA6NFA0 338 aa11.87□□□□□ -0.51
CYCSP55-201ENST00000399027 ZEB2O60315 1214 aa11.87□□□□□ -0.51
CYCSP55-201ENST00000399027 CAPN15O75808 1086 aa11.87□□□□□ -0.51
CYCSP55-201ENST00000399027 ASGR1P07306 291 aa11.87□□□□□ -0.51
CYCSP55-201ENST00000399027 GCFC2P16383 781 aaKnown RBP11.87□□□□□ -0.51
CYCSP55-201ENST00000399027 ACLYP53396 1101 aa11.87□□□□□ -0.51
CYCSP55-201ENST00000399027 BEX3Q00994 111 aa11.87□□□□□ -0.51
CYCSP55-201ENST00000399027 HSDL1Q3SXM5 330 aa11.87□□□□□ -0.51
CYCSP55-201ENST00000399027 BRDTQ58F21 947 aaPredicted RBP11.87□□□□□ -0.51
CYCSP55-201ENST00000399027 PLA2G4DQ86XP0 818 aa11.87□□□□□ -0.51
CYCSP55-201ENST00000399027 NAP1L4Q99733 375 aaKnown RBP11.87□□□□□ -0.51
CYCSP55-201ENST00000399027 BCAS3Q9H6U6 928 aa11.87□□□□□ -0.51
CYCSP55-201ENST00000399027 MLXIPQ9HAP2 919 aa11.87□□□□□ -0.51
CYCSP55-201ENST00000399027 POLR3EQ9NVU0 708 aa11.87□□□□□ -0.51
CYCSP55-201ENST00000399027 TNRC18O15417 2968 aaPredicted RBP11.87□□□□□ -0.51
CYCSP55-201ENST00000399027 ELP1O95163 1332 aa11.86□□□□□ -0.51
CYCSP55-201ENST00000399027 KIF28PB7ZC32 967 aa11.86□□□□□ -0.51
CYCSP55-201ENST00000399027 KPNA6O60684 536 aa11.86□□□□□ -0.51
CYCSP55-201ENST00000399027 CABYRO75952 493 aa11.86□□□□□ -0.51
CYCSP55-201ENST00000399027 TDP2O95551 362 aa11.86□□□□□ -0.51
CYCSP55-201ENST00000399027 PDCP20941 246 aa11.86□□□□□ -0.51
CYCSP55-201ENST00000399027 PURAQ00577 322 aaKnown RBP11.86□□□□□ -0.51
CYCSP55-201ENST00000399027 ITGB3BPQ13352 177 aaPredicted RBP11.86□□□□□ -0.51
CYCSP55-201ENST00000399027 MKRN4PQ13434 485 aaPredicted RBP11.86□□□□□ -0.51
CYCSP55-201ENST00000399027 SNX17Q15036 470 aa11.86□□□□□ -0.51
CYCSP55-201ENST00000399027 LETM2Q2VYF4 491 aa11.86□□□□□ -0.51
CYCSP55-201ENST00000399027 PRR16Q569H4 304 aa11.86□□□□□ -0.51
CYCSP55-201ENST00000399027 C1orf53Q5VUE5 145 aa11.86□□□□□ -0.51
CYCSP55-201ENST00000399027 LARP1BQ659C4 914 aaKnown RBP11.86□□□□□ -0.51
CYCSP55-201ENST00000399027 CYFIP1Q7L576 1253 aa11.86□□□□□ -0.51
CYCSP55-201ENST00000399027 NOSTRINQ8IVI9 506 aa11.86□□□□□ -0.51
CYCSP55-201ENST00000399027 AFG1LQ8WV93 481 aa11.86□□□□□ -0.51
CYCSP55-201ENST00000399027 SPATA33Q96N06 139 aa11.86□□□□□ -0.51
CYCSP55-201ENST00000399027 MKI67P46013 3256 aaKnown RBP11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 H3BQV1 296 aa11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 IPO5O00410 1097 aaKnown RBP11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 MSH4O15457 936 aa11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 DHX15O43143 795 aaKnown RBP11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 PPFIA4O75335 1185 aa11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 DGKDQ16760 1214 aa11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 ETNPPLQ8TBG4 499 aa11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 SLC5A5Q92911 643 aa11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 GLT1D1Q96MS3 346 aa11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 GPR20Q99678 358 aa11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 SDF4Q9BRK5 362 aa11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 ZNF577Q9BSK1 485 aa11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 SENP6Q9GZR1 1112 aaPredicted RBP11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 JPH1Q9HDC5 661 aaPredicted RBP11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 TBC1D22BQ9NU19 505 aa11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 SLC9A2Q9UBY0 812 aa11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 DDX25Q9UHL0 483 aaKnown RBP11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 LTBP2Q14767 1821 aa11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 DNAH12Q6ZR08 3092 aa11.85□□□□□ -0.51
CYCSP55-201ENST00000399027 KAT6AQ92794 2004 aa11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 WNT7AO00755 349 aa11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 TBX3O15119 743 aa11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 SLC37A4O43826 429 aa11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 CCNT1O60563 726 aaKnown RBP11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 ATG7O95352 703 aa11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 SYT1P21579 422 aa11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 TRAPPC10P48553 1259 aa11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 ORC2Q13416 577 aaPredicted RBP11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 CXCL17Q6UXB2 119 aa11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 SLC39A5Q6ZMH5 540 aa11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 SLC43A3Q8NBI5 491 aa11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 FERMT2Q96AC1 680 aa11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 RIT2Q99578 217 aa11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 MTG1Q9BT17 334 aaPredicted RBP11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 HTATIP2Q9BUP3 242 aa11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 SEZ6LQ9BYH1 1024 aa11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 KCNMB3Q9NPA1 279 aa11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 STARD7Q9NQZ5 370 aa11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 PKD2L1Q9P0L9 805 aa11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 TELO2Q9Y4R8 837 aa11.84□□□□□ -0.51
CYCSP55-201ENST00000399027 ARID2Q68CP9 1835 aa11.83□□□□□ -0.51
CYCSP55-201ENST00000399027 TRIP12Q14669 1992 aaPredicted RBP11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 A0A0U1RQG5 324 aaPredicted RBP11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 GSTTP1A0A1W2PQM5 241 aa11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 HAS3O00219 553 aa11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 NOP56O00567 594 aaKnown RBP11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 SORBS3O60504 671 aa11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 PSMD10O75832 226 aa11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 F2P00734 622 aa11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 MYL3P08590 195 aa11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 PDIA4P13667 645 aaKnown RBP11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 CDK7P50613 346 aa11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 GNL2Q13823 731 aaKnown RBP11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 LRRC26Q2I0M4 334 aa11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 B3GNT9Q6UX72 402 aa11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 SEPT1Q8WYJ6 367 aa11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 KAT2BQ92831 832 aa11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 FAM20AQ96MK3 541 aa11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 C16orf70Q9BSU1 422 aa11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 GRIN2DO15399 1336 aa11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 EMSYQ7Z589 1322 aa11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 TANC1Q9C0D5 1861 aa11.83□□□□□ -0.52
CYCSP55-201ENST00000399027 IGKV6D-21A0A0A0MT36 114 aa11.82□□□□□ -0.52
CYCSP55-201ENST00000399027 ARVCFO00192 962 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms