RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 PIM2Q9P1W9 311 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 RNF14Q9UBS8 474 aa15.52■□□□□ 0.08
PCDHGA11-201ENST00000398587 FAM170AA1A519 330 aa15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 LGALS16A8MUM7 142 aa15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 F5H6K3 240 aa15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 EIF2AK2P19525 551 aaKnown RBP15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 YARSP54577 528 aaKnown RBP15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 KLRC3Q07444 240 aa15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 HADHQ16836 314 aaKnown RBP15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 RAB20Q9NX57 234 aa15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 GCNT4Q9P109 453 aa15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 FAM196BA6NMK8 535 aa15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 ATP8B1O43520 1251 aa15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 ANTXR2P58335 489 aa15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 ARHGAP4P98171 946 aa15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 GPR162Q16538 588 aa15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 PRR5LQ6MZQ0 368 aa15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 TBC1D16Q8TBP0 767 aa15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 GRK7Q8WTQ7 553 aa15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 MXD3Q9BW11 206 aa15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 SPZ1Q9BXG8 430 aa15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 MED4Q9NPJ6 270 aa15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 JRKLQ9Y4A0 524 aa15.52■□□□□ 0.07
PCDHGA11-201ENST00000398587 SERPING1P05155 500 aa15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 PROM2Q8N271 834 aa15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 CCDC89Q8N998 374 aa15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 MYO1FO00160 1098 aa15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 SNAP25P60880 206 aa15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 C10orf76Q5T2E6 689 aa15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 INTS8Q75QN2 995 aaKnown RBP15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 FAM133AQ8N9E0 248 aa15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 LINC00116Q8NCU8 138 aa15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 TAF6LQ9Y6J9 622 aa15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 ARHGEF28Q8N1W1 1705 aaKnown RBP15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 IFNB1P01574 187 aa15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 PIK3CAP42336 1068 aa15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 PRCPP42785 496 aa15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 MXI1P50539 228 aa15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 LACTBP83111 547 aaPredicted RBP15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 CTTNQ14247 550 aaKnown RBP15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 QRICH1Q2TAL8 776 aa15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 FBXO33Q7Z6M2 555 aa15.51■□□□□ 0.07
PCDHGA11-201ENST00000398587 MAPK8IP2Q13387 824 aaPredicted RBP15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 PPP1R21Q6ZMI0 780 aa15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 AKR1B1P15121 316 aa15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 KIF11P52732 1056 aa15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 CYP27A1Q02318 531 aa15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 CEP85LQ5SZL2 805 aa15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 FAM83BQ5T0W9 1011 aa15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 STAG2Q8N3U4 1231 aa15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 MRRFQ96E11 262 aaKnown RBP15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 PCIF1Q9H4Z3 704 aa15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 HESX1Q9UBX0 185 aa15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 EXOC8Q8IYI6 725 aa15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 EPB41L4AQ9HCS5 686 aaPredicted RBP15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 FBXO2Q9UK22 296 aaPredicted RBP15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 CNTNAP4Q9C0A0 1308 aa15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 RGS16O15492 202 aaPredicted RBP15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 PRR29P0C7W0 189 aa15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 GUCY2DQ02846 1103 aa15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 LGSNQ5TDP6 509 aa15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 SMIM5Q71RC9 77 aa15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 RAD54LQ92698 747 aa15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 KCNB2Q92953 911 aa15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 ATF5Q9Y2D1 282 aaPredicted RBP15.5■□□□□ 0.07
PCDHGA11-201ENST00000398587 SPATA31A5Q5VU36 1347 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 SPATA31A6Q5VVP1 1343 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 SPATA31A7Q8IWB4 1347 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 MESDQ14696 234 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 SEPT14Q6ZU15 432 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 TTC16Q8NEE8 873 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 TRIM11Q96F44 468 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 PSMD1Q99460 953 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 DPH5Q9H2P9 285 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 TMEM260Q9NX78 707 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 MKRN1Q9UHC7 482 aaKnown RBP15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 DCCP43146 1447 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 CCDC151A5D8V7 595 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 LRRN2O75325 713 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 PPFIA4O75335 1185 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 PSAPP07602 524 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 KRT15P19012 456 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 GBP1P32455 592 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 APBA1Q02410 837 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 ADGRF4Q8IZF3 695 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 RNF207Q6ZRF8 634 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 CABS1Q96KC9 395 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 CEP63Q96MT8 703 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 MMS19Q96T76 1030 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 HERC5Q9UII4 1024 aaKnown RBP15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 FEM1BQ9UK73 627 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 DAGLAQ9Y4D2 1042 aa15.49■□□□□ 0.07
PCDHGA11-201ENST00000398587 TRIM49BA6NDI0 452 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 GFPT2O94808 682 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 ATF7P17544 494 aaPredicted RBP15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 POTEDQ86YR6 584 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 PHF20Q9BVI0 1012 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 STIM2Q9P246 746 aa15.48■□□□□ 0.07
PCDHGA11-201ENST00000398587 GOLGA8KD6RF30 607 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms