RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 EDEM3Q9BZQ6 932 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 ANAPC4Q9UJX5 808 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 ZNF148Q9UQR1 794 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 hCG_1984214I3L0E3 225 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 SH3BGRP55822 239 aaPredicted RBP12.01□□□□□ -0.49
HPS4-202ENST00000398145 ADCY1Q08828 1119 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 CCDC14Q49A88 953 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 SGO2Q562F6 1265 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 ODR4Q5SWX8 454 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 WDR93Q6P2C0 686 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 ZNF713Q8N859 430 aaPredicted RBP12.01□□□□□ -0.49
HPS4-202ENST00000398145 RAB3IL1Q8TBN0 382 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 DDX47Q9H0S4 455 aaKnown RBP12.01□□□□□ -0.49
HPS4-202ENST00000398145 EPN3Q9H201 632 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 ARHGEF10LQ9HCE6 1279 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 POC1B-GALNT4F8VUJ3 575 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 LRRN2O75325 713 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 MYL7Q01449 175 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 GPATCH4Q5T3I0 446 aaKnown RBP12.01□□□□□ -0.49
HPS4-202ENST00000398145 USP17L2Q6R6M4 530 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 DPP8Q6V1X1 898 aaPredicted RBP12.01□□□□□ -0.49
HPS4-202ENST00000398145 KSR1Q8IVT5 923 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 ADSSL1Q8N142 457 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 CFAP61Q8NHU2 1237 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 CCT8L2Q96SF2 557 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 SH2D4AQ9H788 454 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 SETD1BQ9UPS6 1966 aaKnown RBP12.01□□□□□ -0.49
HPS4-202ENST00000398145 SNAP23O00161 211 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 GUF1Q8N442 669 aaKnown RBP12.01□□□□□ -0.49
HPS4-202ENST00000398145 RBM17Q96I25 401 aaKnown RBP12.01□□□□□ -0.49
HPS4-202ENST00000398145 SNX24Q9Y343 169 aa12.01□□□□□ -0.49
HPS4-202ENST00000398145 FOSP01100 380 aaPredicted RBP12□□□□□ -0.49
HPS4-202ENST00000398145 USP17L8P0C7I0 530 aa12□□□□□ -0.49
HPS4-202ENST00000398145 PLA2G4BP0C869 781 aa12□□□□□ -0.49
HPS4-202ENST00000398145 SRGNP10124 158 aa12□□□□□ -0.49
HPS4-202ENST00000398145 MDH1P40925 334 aaKnown RBP12□□□□□ -0.49
HPS4-202ENST00000398145 BTDP43251 543 aa12□□□□□ -0.49
HPS4-202ENST00000398145 STRN3Q13033 797 aa12□□□□□ -0.49
HPS4-202ENST00000398145 DRP2Q13474 957 aa12□□□□□ -0.49
HPS4-202ENST00000398145 TXNRD1Q16881 649 aa12□□□□□ -0.49
HPS4-202ENST00000398145 CYP4F22Q6NT55 531 aa12□□□□□ -0.49
HPS4-202ENST00000398145 PARP9Q8IXQ6 854 aa12□□□□□ -0.49
HPS4-202ENST00000398145 SCYL3Q8IZE3 742 aa12□□□□□ -0.49
HPS4-202ENST00000398145 CCDC127Q96BQ5 260 aa12□□□□□ -0.49
HPS4-202ENST00000398145 HPS5Q9UPZ3 1129 aa12□□□□□ -0.49
HPS4-202ENST00000398145 HPSEQ9Y251 543 aa12□□□□□ -0.49
HPS4-202ENST00000398145 ZNF804BA4D1E1 1349 aa12□□□□□ -0.49
HPS4-202ENST00000398145 PP2D1A8MPX8 630 aa12□□□□□ -0.49
HPS4-202ENST00000398145 ERVV-1B6SEH8 477 aa12□□□□□ -0.49
HPS4-202ENST00000398145 PODXLO00592 558 aa12□□□□□ -0.49
HPS4-202ENST00000398145 CLIC2O15247 247 aa12□□□□□ -0.49
HPS4-202ENST00000398145 ATF7P17544 494 aaPredicted RBP12□□□□□ -0.49
HPS4-202ENST00000398145 RNASELQ05823 741 aaKnown RBP12□□□□□ -0.49
HPS4-202ENST00000398145 PTPAQ15257 358 aa12□□□□□ -0.49
HPS4-202ENST00000398145 LLGL1Q15334 1064 aa12□□□□□ -0.49
HPS4-202ENST00000398145 RSRC2Q7L4I2 434 aaKnown RBP12□□□□□ -0.49
HPS4-202ENST00000398145 GADD45GIP1Q8TAE8 222 aaPredicted RBP12□□□□□ -0.49
HPS4-202ENST00000398145 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12□□□□□ -0.49
HPS4-202ENST00000398145 AGPAT5Q9NUQ2 364 aa12□□□□□ -0.49
HPS4-202ENST00000398145 RAB20Q9NX57 234 aa12□□□□□ -0.49
HPS4-202ENST00000398145 INO80Q9ULG1 1556 aaPredicted RBP12□□□□□ -0.49
HPS4-202ENST00000398145 LOC102724159A0A0B4J2E5 919 aa12□□□□□ -0.49
HPS4-202ENST00000398145 K7ENM7 598 aa12□□□□□ -0.49
HPS4-202ENST00000398145 DKC1O60832 514 aaKnown RBP eCLIP12□□□□□ -0.49
HPS4-202ENST00000398145 BAG2O95816 211 aa12□□□□□ -0.49
HPS4-202ENST00000398145 MAP7Q14244 749 aa12□□□□□ -0.49
HPS4-202ENST00000398145 PWP2Q15269 919 aaKnown RBP12□□□□□ -0.49
HPS4-202ENST00000398145 TRAPPC3LQ5T215 181 aa12□□□□□ -0.49
HPS4-202ENST00000398145 RBM26Q5T8P6 1007 aaKnown RBP12□□□□□ -0.49
HPS4-202ENST00000398145 COA7Q96BR5 231 aa12□□□□□ -0.49
HPS4-202ENST00000398145 FAM205CA6NFA0 338 aa12□□□□□ -0.49
HPS4-202ENST00000398145 H3BQF6 201 aa12□□□□□ -0.49
HPS4-202ENST00000398145 GAP43P17677 238 aa12□□□□□ -0.49
HPS4-202ENST00000398145 TNNI1P19237 187 aa12□□□□□ -0.49
HPS4-202ENST00000398145 LMNB2Q03252 620 aa12□□□□□ -0.49
HPS4-202ENST00000398145 TRIM65Q6PJ69 517 aa12□□□□□ -0.49
HPS4-202ENST00000398145 CHMP6Q96FZ7 201 aa12□□□□□ -0.49
HPS4-202ENST00000398145 CARD10Q9BWT7 1032 aa12□□□□□ -0.49
HPS4-202ENST00000398145 PPP1R1BQ9UD71 204 aaPredicted RBP12□□□□□ -0.49
HPS4-202ENST00000398145 TBK1Q9UHD2 729 aa12□□□□□ -0.49
HPS4-202ENST00000398145 UTYO14607 1347 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 A0A0G2JLW4 131 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 ARHGAP42A6NI28 874 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 KRT14P02533 472 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 PSMC4P43686 418 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 LRRN4CLQ8ND94 238 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 ZNF653Q96CK0 615 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 ANAPC5Q9UJX4 755 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 USP17L3A6NCW0 530 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 USP17L4A6NCW7 530 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 LSP1P33241 339 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 IRX4P78413 519 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 TRPC3Q13507 836 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 USP17L1Q7RTZ2 530 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 FBXO11Q86XK2 927 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 RSAD2Q8WXG1 361 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 TRIM4Q9C037 500 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 CXorf56Q9H5V9 222 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 C1orf112Q9NSG2 853 aa11.99□□□□□ -0.49
HPS4-202ENST00000398145 TPX2Q9ULW0 747 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms