RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 SDF4Q9BRK5 362 aa26.67■■□□□ 1.86
TSPAN4-203ENST00000397397 SORBS3O60504 671 aa26.66■■□□□ 1.86
TSPAN4-203ENST00000397397 TXKP42681 527 aa26.66■■□□□ 1.86
TSPAN4-203ENST00000397397 NEDD9Q14511 834 aa26.66■■□□□ 1.86
TSPAN4-203ENST00000397397 DUSP28Q4G0W2 176 aa26.66■■□□□ 1.86
TSPAN4-203ENST00000397397 GIMAP8Q8ND71 665 aaPredicted RBP26.66■■□□□ 1.86
TSPAN4-203ENST00000397397 COPS5Q92905 334 aa26.66■■□□□ 1.86
TSPAN4-203ENST00000397397 TBC1D22BQ9NU19 505 aa26.66■■□□□ 1.86
TSPAN4-203ENST00000397397 NFASCO94856 1347 aa26.66■■□□□ 1.86
TSPAN4-203ENST00000397397 DDX39AO00148 427 aaKnown RBP26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 SEPT4O43236 478 aa26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 GAS7O60861 476 aa26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 GGPS1O95749 300 aa26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 MARCKSP29966 332 aaPredicted RBP26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 SOX10P56693 466 aa26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 GJC2Q5T442 439 aaPredicted RBP26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 RIT2Q99578 217 aa26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 TEKT3Q9BXF9 490 aa26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 BCAS3Q9H6U6 928 aa26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 NKRFO15226 690 aaKnown RBP eCLIP26.65■■□□□ 1.861e-6■■■□□ 18.9
TSPAN4-203ENST00000397397 SPTLC2O15270 562 aa26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 DHX15O43143 795 aaKnown RBP26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 ADCY6O43306 1168 aa26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 PRPHP41219 470 aa26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 ARL6IP4Q66PJ3 421 aaKnown RBP26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 CYFIP1Q7L576 1253 aa26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 DHX37Q8IY37 1157 aaKnown RBP26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 SPATA32Q96LK8 384 aa26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 SCAND2PQ9GZW5 306 aaPredicted RBP26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 TTC12Q9H892 705 aaPredicted RBP26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 MLXIPQ9HAP2 919 aa26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 HMX1Q9NP08 348 aaPredicted RBP26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 RCOR1Q9UKL0 485 aa26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 PCDHA12Q9UN75 941 aa26.65■■□□□ 1.86
TSPAN4-203ENST00000397397 PSMD10O75832 226 aa26.64■■□□□ 1.85
TSPAN4-203ENST00000397397 GH1P01241 217 aa26.64■■□□□ 1.85
TSPAN4-203ENST00000397397 CELF3Q5SZQ8 465 aaKnown RBP26.64■■□□□ 1.85
TSPAN4-203ENST00000397397 DTHD1Q6ZMT9 781 aa26.64■■□□□ 1.85
TSPAN4-203ENST00000397397 LEO1Q8WVC0 666 aaPredicted RBP26.64■■□□□ 1.85
TSPAN4-203ENST00000397397 PTGS1P23219 599 aa26.63■■□□□ 1.85
TSPAN4-203ENST00000397397 TMEM266Q2M3C6 531 aa26.63■■□□□ 1.85
TSPAN4-203ENST00000397397 KCNG4Q8TDN1 519 aa26.63■■□□□ 1.85
TSPAN4-203ENST00000397397 LENG1Q96BZ8 264 aaPredicted RBP26.63■■□□□ 1.85
TSPAN4-203ENST00000397397 GDPD2Q9HCC8 539 aa26.63■■□□□ 1.85
TSPAN4-203ENST00000397397 JPH1Q9HDC5 661 aaPredicted RBP26.63■■□□□ 1.85
TSPAN4-203ENST00000397397 TCEAL9Q9UHQ7 104 aa26.63■■□□□ 1.85
TSPAN4-203ENST00000397397 GNEQ9Y223 722 aaKnown RBP26.63■■□□□ 1.85
TSPAN4-203ENST00000397397 MORC2Q9Y6X9 1032 aaPredicted RBP26.63■■□□□ 1.85
TSPAN4-203ENST00000397397 TECP42680 631 aa26.62■■□□□ 1.85
TSPAN4-203ENST00000397397 ARHGAP1Q07960 439 aa26.62■■□□□ 1.85
TSPAN4-203ENST00000397397 IL17AQ16552 155 aa26.62■■□□□ 1.85
TSPAN4-203ENST00000397397 METTL7BQ6UX53 244 aa26.62■■□□□ 1.85
TSPAN4-203ENST00000397397 OR6J1Q8NGC5 347 aa26.62■■□□□ 1.85
TSPAN4-203ENST00000397397 SLC9A2Q9UBY0 812 aa26.62■■□□□ 1.85
TSPAN4-203ENST00000397397 VAV3Q9UKW4 847 aa26.62■■□□□ 1.85
TSPAN4-203ENST00000397397 VWA3AA6NCI4 1184 aa26.61■■□□□ 1.85
TSPAN4-203ENST00000397397 PPP6R2O75170 966 aa26.61■■□□□ 1.85
TSPAN4-203ENST00000397397 FARP2O94887 1054 aaPredicted RBP26.61■■□□□ 1.85
TSPAN4-203ENST00000397397 MYCP01106 439 aaPredicted RBP26.61■■□□□ 1.85
TSPAN4-203ENST00000397397 SP4Q02446 784 aa26.61■■□□□ 1.85
TSPAN4-203ENST00000397397 LAMC2Q13753 1193 aa26.61■■□□□ 1.85
TSPAN4-203ENST00000397397 FERMT2Q96AC1 680 aa26.61■■□□□ 1.85
TSPAN4-203ENST00000397397 UNC93B1Q9H1C4 597 aa26.61■■□□□ 1.85
TSPAN4-203ENST00000397397 UNC45AQ9H3U1 944 aa26.61■■□□□ 1.85
TSPAN4-203ENST00000397397 DDX20Q9UHI6 824 aaKnown RBP26.61■■□□□ 1.85
TSPAN4-203ENST00000397397 FBXO2Q9UK22 296 aaPredicted RBP26.61■■□□□ 1.85
TSPAN4-203ENST00000397397 DYNC1LI2O43237 492 aaPredicted RBP26.6■■□□□ 1.85
TSPAN4-203ENST00000397397 CHMP2AO43633 222 aa26.6■■□□□ 1.85
TSPAN4-203ENST00000397397 DUSP11O75319 330 aaKnown RBP26.6■■□□□ 1.85
TSPAN4-203ENST00000397397 RARBP10826 455 aa26.6■■□□□ 1.85
TSPAN4-203ENST00000397397 FXR2P51116 673 aaKnown RBP eCLIP26.6■■□□□ 1.85
TSPAN4-203ENST00000397397 KRT76Q01546 638 aa26.6■■□□□ 1.85
TSPAN4-203ENST00000397397 TLK2Q86UE8 772 aa26.6■■□□□ 1.85
TSPAN4-203ENST00000397397 KRI1Q8N9T8 703 aaKnown RBP26.6■■□□□ 1.85
TSPAN4-203ENST00000397397 ARMC5Q96C12 935 aa26.6■■□□□ 1.85
TSPAN4-203ENST00000397397 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.6■■□□□ 1.852e-6■■■■□ 22.9
TSPAN4-203ENST00000397397 AP5M1Q9H0R1 490 aa26.6■■□□□ 1.85
TSPAN4-203ENST00000397397 SRPRBQ9Y5M8 271 aaKnown RBP26.6■■□□□ 1.85
TSPAN4-203ENST00000397397 ME1P48163 572 aa26.59■■□□□ 1.85
TSPAN4-203ENST00000397397 PPP2R5CQ13362 524 aa26.59■■□□□ 1.85
TSPAN4-203ENST00000397397 MTFR1Q15390 333 aa26.59■■□□□ 1.85
TSPAN4-203ENST00000397397 NCAPH2Q6IBW4 605 aa26.59■■□□□ 1.85
TSPAN4-203ENST00000397397 EMID1Q96A84 441 aaPredicted RBP26.59■■□□□ 1.85
TSPAN4-203ENST00000397397 SPATA33Q96N06 139 aa26.59■■□□□ 1.85
TSPAN4-203ENST00000397397 Q9Y3F1 56 aa26.59■■□□□ 1.85
TSPAN4-203ENST00000397397 CCNE2O96020 404 aa26.58■■□□□ 1.85
TSPAN4-203ENST00000397397 CCL5P13501 91 aa26.58■■□□□ 1.85
TSPAN4-203ENST00000397397 GRIN1Q05586 938 aa26.58■■□□□ 1.85
TSPAN4-203ENST00000397397 ZNF746Q6NUN9 644 aaPredicted RBP26.58■■□□□ 1.85
TSPAN4-203ENST00000397397 RAB34Q9BZG1 259 aa26.58■■□□□ 1.85
TSPAN4-203ENST00000397397 TELO2Q9Y4R8 837 aa26.58■■□□□ 1.85
TSPAN4-203ENST00000397397 POTEMA6NI47 508 aa26.57■■□□□ 1.84
TSPAN4-203ENST00000397397 NOP56O00567 594 aaKnown RBP26.57■■□□□ 1.84
TSPAN4-203ENST00000397397 MSCO60682 206 aa26.57■■□□□ 1.84
TSPAN4-203ENST00000397397 RGS19P49795 217 aa26.57■■□□□ 1.84
TSPAN4-203ENST00000397397 ACTR2P61160 394 aa26.57■■□□□ 1.84
TSPAN4-203ENST00000397397 SPIRE1Q08AE8 756 aa26.57■■□□□ 1.84
TSPAN4-203ENST00000397397 B3GNT9Q6UX72 402 aa26.57■■□□□ 1.84
TSPAN4-203ENST00000397397 CLEC17AQ6ZS10 378 aa26.57■■□□□ 1.84
TSPAN4-203ENST00000397397 MIER3Q7Z3K6 550 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms